Access the full text.
Sign up today, get DeepDyve free for 14 days.
Loading next page...
/lp/springer-journals/detection-of-norovirus-genogroup-iv-klassevirus-and-pepper-mild-mottle-vHreOYu50F
References (44)
-
R. Rodríguez, P. Gundy, G. Rijal, C. Gerba (2012)
The Impact of Combined Sewage Overflows on the Viral Contamination of Receiving WatersFood and Environmental Virology, 4
-
E. Haramoto, M. Kitajima, M. Otagiri (2013)
Development of a Reverse Transcription-Quantitative PCR Assay for Detection of Salivirus/KlassevirusApplied and Environmental Microbiology, 79
-
Sung-Geun Lee, W. Jheong, C. Suh, Sang-Hyun Kim, Joong-Bok Lee, Y. Jeong, Gwangpyo Ko, K. Jang, Gyu‐Cheol Lee, S. Paik (2010)
Nationwide Groundwater Surveillance of Noroviruses in South Korea, 2008Applied and Environmental Microbiology, 77
-
K. Tamura, J. Dudley, M. Nei, Sudhir Kumar (2007)
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.Molecular biology and evolution, 24 8
-
E. Haramoto, M. Otagiri (2013)
Prevalence and Genetic Diversity of Klassevirus in Wastewater in JapanFood and Environmental Virology, 5
-
G. Rosa, M. Iaconelli, M. Pourshaban, M. Fratini, M. Muscillo (2010)
Molecular detection and genetic diversity of norovirus genogroup IV: a yearlong monitoring of sewage throughout ItalyArchives of Virology, 155
-
Masaaki Kitajima, E. Haramoto, C. Phanuwan, Hiroyuki Katayama, H. Furumai (2012)
Molecular detection and genotyping of human noroviruses in influent and effluent water at a wastewater treatment plant in JapanJournal of Applied Microbiology, 112
-
G. Rosa, M. Fratini, V. Vennarucci, A. Guercio, G. Purpari, M. Muscillo (2012)
GIV noroviruses and other enteric viruses in bivalves: a preliminary study.The new microbiologica, 35 1
-
A. Trujillo, K. McCaustland, D. Zheng, L. Hadley, G. Vaughn, S. Adams, T. Ando, R. Glass, S. Monroe (2006)
Use of TaqMan Real-Time Reverse Transcription-PCR for Rapid Detection, Quantification, and Typing of NorovirusJournal of Clinical Microbiology, 44
-
Zhang Tao, M. Breitbart, W. Lee, J. Run, Chia-Lin Wei, S. Soh, M. Hibberd, E. Liu, F. Rohwer, Y. Ruan (2005)
RNA Viral Community in Human Feces: Prevalence of Plant Pathogenic VirusesPLoS Biology, 4
-
J. Kremer, J. Langlet, S. Skraber, P. Weicherding, B. Weber, H. Cauchie, Sébastien Landtsheer, J. Even, C. Muller, L. Hoffmann, J. Mossong (2011)
Genetic diversity of noroviruses from outbreaks, sporadic cases and wastewater in Luxembourg 2008-2009.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases, 17 8
-
T. Ng, T. Ng, Rachel Marine, Chunlin Wang, P. Simmonds, Beatrix Kapusinszky, Beatrix Kapusinszky, L. Bodhidatta, B. Oderinde, K. Wommack, E. Delwart, E. Delwart (2012)
High Variety of Known and New RNA and DNA Viruses of Diverse Origins in Untreated SewageJournal of Virology, 86
-
L. Holtz, Stacy Finkbeiner, Guoyan Zhao, C. Kirkwood, R. Girones, J. Pipas, David Wang (2009)
Klassevirus 1, a previously undescribed member of the family Picornaviridae, is globally widespreadVirology Journal, 6
-
B. Chung, H. Choi, E. Yang, Jeom-Deog Cho, I. Cho, G. Choi, Seung-Kook Choi (2012)
Tomato spotted wilt virus isolates giving different infection in commercial Capsicum annuum cultivarsPlant Pathology Journal, 28
-
T. Fumian, C. Vieira, J. Leite, M. Miagostovich (2013)
Assessment of burden of virus agents in an urban sewage treatment plant in Rio de Janeiro, Brazil.Journal of water and health, 11 1
-
V. Martella, N. Decaro, E. Lorusso, Arianna Radogna, P. Moschidou, F. Amorisco, M. Lucente, C. Desario, V. Mari, G. Elia, K. Bányai, L. Carmichael, C. Buonavoglia (2009)
Genetic Heterogeneity and Recombination in Canine NorovirusesJournal of Virology, 83
-
Shigeyuki Kojima, T. Kageyama, S. Fukushi, F. Hoshino, M. Shinohara, K. Uchida, K. Natori, N. Takeda, K. Katayama (2002)
Genogroup-specific PCR primers for detection of Norwalk-like viruses.Journal of virological methods, 100 1-2
-
J. Chung, Tae-Hee Han, Sang-Hun Park, Sang Kim, E. Hwang (2010)
Detection of GII‐4/2006b variant and recombinant noroviruses in children with acute gastroenteritis, South KoreaJournal of Medical Virology, 82
-
Masaaki Kitajima, E. Haramoto, C. Phanuwan, Hiroyuki Katayama, S. Ohgaki (2009)
Detection of genogroup IV norovirus in wastewater and river water in JapanLetters in Applied Microbiology, 49
-
María Fernández, C. Torres, H. Poma, G. Riviello-López, L. Martínez, D. Cisterna, V. Rajal, S. Nates, V. Mbayed (2012)
Environmental surveillance of norovirus in Argentina revealed distinct viral diversity patterns, seasonality and spatio-temporal diffusion processes.The Science of the total environment, 437
-
A. Greninger, C. Runckel, C. Chiu, T. Haggerty, J. Parsonnet, D. Ganem, J. Derisi (2009)
The complete genome of klassevirus – a novel picornavirus in pediatric stoolVirology Journal, 6
-
M. Iwai, S. Hasegawa, M. Obara, Kazuya Nakamura, E. Horimoto, T. Takizawa, T. Kurata, S. Sogen, K. Shiraki (2009)
Continuous Presence of Noroviruses and Sapoviruses in Raw Sewage Reflects Infections among Inhabitants of Toyama, Japan (2006 to 2008)Applied and Environmental Microbiology, 75
-
I. Hamza, L. Jurzik, K. Uberla, M. Wilhelm (2011)
Evaluation of pepper mild mottle virus, human picobirnavirus and Torque teno virus as indicators of fecal contamination in river water.Water research, 45 3
-
T. Phan, M. Okame, T. Nguyen, N. Maneekarn, O. Nishio, S. Okitsu, H. Ushijima (2004)
Human astrovirus, norovirus (GI, GII), and sapovirus infections in Pakistani children with diarrheaJournal of Medical Virology, 73
-
JY Chung, TH Han, SH Park, SW Kim, ES Hwang (2010)
Detection of GII-4/2006b variant and recombinant noroviruses in children with acute gastroenteritisJ Med Virol, 82
-
T. Shan, Chunmei Wang, L. Cui, Ying Yu, E. Delwart, Wei Zhao, Caixia Zhu, D. Lan, X. Dai, Xiuguo Hua (2010)
Picornavirus Salivirus/Klassevirus in Children with Diarrhea, ChinaEmerging Infectious Diseases, 16
-
K. Gomes, J. Stupka, Jorge Gomez, G. Parra (2007)
Molecular characterization of calicivirus strains detected in outbreaks of gastroenteritis in ArgentinaJournal of Medical Virology, 79
-
D. Zheng, T. Ando, R. Fankhauser, R. Beard, R. Glass, S. Monroe (2006)
Norovirus classification and proposed strain nomenclature.Virology, 346 2
-
G. Rosa, M. Pourshaban, M. Iaconelli, M. Muscillo (2008)
Detection of genogroup IV noroviruses in environmental and clinical samples and partial sequencing through rapid amplification of cDNA endsArchives of Virology, 153
-
John-Sebastian Eden, Kun Lim, P. White (2012)
Complete Genome of the Human Norovirus GIV.1 Strain Lake Macquarie VirusJournal of Virology, 86
-
F. Bon, K. Ambert‐Balay, H. Giraudon, J. Kaplon, S. Guyader, M. Pommepuy, A. Gallay, V. Vaillant, H. Valk, Roxane Chikhi-Brachet, A. Flahaut, P. Pothier, E. Kohli (2005)
Molecular Epidemiology of Caliciviruses Detected in Sporadic and Outbreak Cases of Gastroenteritis in France from December 1998 to February 2004Journal of Clinical Microbiology, 43
-
Masaaki Kitajima, T. Oka, E. Haramoto, C. Phanuwan, N. Takeda, Kazuhiko Katayama, Hiroyuki Katayama (2011)
Genetic diversity of genogroup IV noroviruses in wastewater in JapanLetters in Applied Microbiology, 52
-
K. Rosario, E. Symonds, C. Sinigalliano, J. Stewart, M. Breitbart (2009)
Pepper Mild Mottle Virus as an Indicator of Fecal PollutionApplied and Environmental Microbiology, 75
-
Linlin Li, J. Victoria, A. Kapoor, O. Blinkova, Chunlin Wang, F. Babrzadeh, C. Mason, P. Pandey, H. Triki, O. Bahri, B. Oderinde, M. Baba, D. Bukbuk, J. Besser, J. Bartkus, E. Delwart (2009)
A Novel Picornavirus Associated with GastroenteritisJournal of Virology, 83
-
T. Ando, J. Noel, J. Noel, R. Fankhauser, R. Fankhauser (2000)
Genetic classification of "Norwalk-like viruses..The Journal of infectious diseases, 181 Suppl 2
-
Tae-Hee Han, Cheol-Hwan Kim, J. Chung, Sang-Hun Park, E. Hwang (2011)
Emergence of norovirus GII-4/2008 variant and recombinant strains in Seoul, KoreaArchives of Virology, 156
-
H. Katayama, Akihiro Shimasaki, S. Ohgaki (2002)
Development of a Virus Concentration Method and Its Application to Detection of Enterovirus and Norwalk Virus from Coastal SeawaterApplied and Environmental Microbiology, 68
-
P. Colson, H. Richet, C. Desnues, Fanny Balique, V. Moal, J. Grob, P. Berbis, H. Lecoq, J. Harlé, Y. Berland, D. Raoult (2010)
Pepper Mild Mottle Virus, a Plant Virus Associated with Specific Immune Responses, Fever, Abdominal Pains, and Pruritus in HumansPLoS ONE, 5
-
P. Khamrin, N. Maneekarn, A. Thongprachum, Natthawan Chaimongkol, S. Okitsu, H. Ushijima (2010)
Emergence of new norovirus variants and genetic heterogeneity of noroviruses and sapoviruses in children admitted to hospital with diarrhea in ThailandJournal of Medical Virology, 82
-
E Haramoto, M Otagiri (2013)
Prevalence and genetic diversity of klassevirus in waste waterFood Environ Virol, 5
-
W. Kim, S. Managaki, H. Furumai, F. Nakajima (2009)
Diurnal fluctuation of indicator microorganisms and intestinal viruses in combined sewer system.Water science and technology : a journal of the International Association on Water Pollution Research, 60 11
-
Heetae Lee, Misoon Kim, J. Lee, M. Lim, Minjung Kim, Ju-Mi Kim, W. Jheong, Jong-Myeon Kim, Gwangpyo Ko (2011)
Investigation of norovirus occurrence in groundwater in metropolitan Seoul, Korea.The Science of the total environment, 409 11
-
Tae-Hee Han, Cheol-Hwan Kim, J. Chung, Sang-Hun Park, E. Hwang (2010)
Klassevirus Infection in Children, South KoreaEmerging Infectious Diseases, 16
-
R. Fankhauser, S. Monroe, J. Noel, C. Humphrey, J. Bresee, U. Parashar, T. Ando, R. Glass (2002)
Epidemiologic and molecular trends of "Norwalk-like viruses" associated with outbreaks of gastroenteritis in the United States.The Journal of infectious diseases, 186 1
- Publisher
- Springer Journals
- Copyright
- Copyright © 2014 by Springer-Verlag Wien
- Subject
- Biomedicine; Virology; Medical Microbiology; Infectious Diseases
- ISSN
- 0304-8608
- eISSN
- 1432-8798
- DOI
- 10.1007/s00705-013-1848-7
- pmid
- 24052148
- Publisher site
- See Article on Publisher Site
Abstract
Norovirus (NoV) genogroup (G) IV has been infrequently isolated from patients suffering from acute gastroenteritis (AGE), although this virus has not been detected in Korea. Klassevirus, a novel virus belonging to the family Picornaviridae and a possible etiologic agent of AGE, and pepper mild mottle virus (PMMoV), which originates from processed pepper products and is shed in human feces, are suggested to be new indicators of fecal pollution. We aimed to investigate the presence of NoV-GIV, klassevirus, and PMMoV in sewage samples collected in Korea. Between December 2010 and February 2012, influent sewage samples were collected every month from a wastewater treatment plant located in the eastern part of Seoul in Korea. The sewage samples were concentrated by the adsorption elution method using an HA (pore size of 0.45 μm with mixed cellulose ester) electronegative filter with an acid-rinse procedure. RT-PCR was performed using specific primers for the capsid gene of NoV-GII and NoV-GIV, the coat gene of PMMoV, and the VP0/VP1 gene of klassevirus. Among the 14 sewage samples tested, klassevirus was detected in eight (57.1 %), PMMoV in eight (57.1 %), NoV-GII in five (35.7 %), and NoV-GIV in three (21.4 %). NoV-GIV was detected in December 2010 and January and March 2011. PMMoV and klassevirus were frequently detected in winter. Phylogenetic analysis revealed that the NoV-GIV detected in this study belonged to G-IV1 lineage. This is the first study to confirm the presence of NoV-GIV, klassevirus, and PMMoV in sewage samples in Korea.
Journal
Archives of Virology – Springer Journals
Published: Mar 1, 2014