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C Andre, RP Haslam, J Shanklin (2012)
Feedback regulation of plastidic acetyl‐CoA carboxylase by 18:1‐acyl carrier protein in Brassica napus, 109
RD Allen, F Bernier, PA Lessard, RN Beachy (1989)
Nuclear factors interact with a soybean beta‐conglycinin enhancer, 1
DK Allen, JB Ohlrogge, Y Shachar‐Hill (2009b)
The role of light in soybean seed filling metabolism, 58
M Abe, T Iriki, M Funaba, S Onda (1998)
Limiting amino acids for a corn and soybean meal diet in weaned calves less than three months of age, 76
JJA Armenteros, M Salvatore, O Emanuelsson, O Winther, G Von Heijne, A Elofsson, H Nielsen (2019)
Detecting sequence signals in targeting peptides using deep learning, 2
DK Allen, PD Bates, H Tjellström (2015)
Tracking the metabolic pulse of plant lipid production with isotopic labeling and flux analyses: past, present and future, 58
DK Allen, JD Young (2013)
Carbon and nitrogen provisions alter the metabolic flux in developing soybean embryos, 161
DK Allen, JD Young (2020)
Tracing metabolic flux through time and space with isotope labeling experiments, 64
Y Assefa, LC Purcell, M Salmeron, S Naeve, SN Casteel, P Kovács, S Archontoulis, M Licht, F Below, H Kandel (2019)
Assessing variation in us soybean seed composition (protein and oil), 10
DK Allen (2016a)
Assessing compartmentalized flux in lipid metabolism with isotopes, 1861
CL Arias, T Quach, T Huynh, H Nguyen, A Moretti, Y Shi, M Guo, A Rasoul, K Van, L McHale (2022)
Expression of AtWRI1 and AtDGAT1 during soybean embryo development influences oil and carbohydrate metabolism, 20
Y Assefa, N Bajjalieh, S Archontoulis, S Casteel, D Davidson, P Kovács, S Naeve, IA Ciampitti (2018)
Spatial characterization of soybean yield and quality (amino acids, oil, and protein) for United States, 8
DK Allen, RW Laclair, JB Ohlrogge, Y Shachar‐Hill (2012)
Isotope labelling of Rubisco subunits provides in vivo information on subcellular biosynthesis and exchange of amino acids between compartments, 35
CE Alvarez, A Bovdilova, A Höppner, CC Wolff, M Saigo, F Trajtenberg, T Zhang, A Buschiazzo, L Nagel‐Steger, MF Drincovich (2019)
Molecular adaptations of NADP‐malic enzyme for its function in C4 photosynthesis in grasses, 5
DK Allen, IGL Libourel, Y Shachar‐Hill (2009a)
Metabolic flux analysis in plants: coping with complexity, 32
DK Allen (2016b)
Quantifying plant phenotypes with isotopic labeling & metabolic flux analysis, 37
Central metabolism produces amino and fatty acids for protein and lipids that establish seed value. Biosynthesis of storage reserves occurs in multiple organelles that exchange central intermediates including two essential metabolites, malate, and pyruvate that are linked by malic enzyme. Malic enzyme can be active in multiple subcellular compartments, partitioning carbon and reducing equivalents for anabolic and catabolic requirements. Prior studies based on isotopic labeling and steady‐state metabolic flux analyses indicated malic enzyme provides carbon for fatty acid biosynthesis in plants, though genetic evidence confirming this role is lacking. We hypothesized that increasing malic enzyme flux would alter carbon partitioning and result in increased lipid levels in soybeans. Homozygous transgenic soybean plants expressing Arabidopsis malic enzyme alleles, targeting the translational products to plastid or outside the plastid during seed development, were verified by transcript and enzyme activity analyses, organelle proteomics, and transient expression assays. Protein, oil, central metabolites, cofactors, and acyl‐acyl carrier protein (ACPs) levels were quantified overdevelopment. Amino and fatty acid levels were altered resulting in an increase in lipids by 0.5–2% of seed biomass (i.e. 2–9% change in oil). Subcellular targeting of a single gene product in central metabolism impacts carbon and reducing equivalent partitioning for seed storage reserves in soybeans.
New Phytologist – Wiley
Published: Sep 1, 2023
Keywords: carbon partitioning; central carbon metabolism; lipid production; malic enzyme; metabolic flux; soybean seed composition; subcellular compartmentation
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