Access the full text.
Sign up today, get DeepDyve free for 14 days.
A. Gacy, G. Goellner, C. Spiro, X. Chen, G. Gupta, E. Bradbury, R. Dyer, M. Mikesell, J. Yao, A. Johnson, A. Richter, S. Melançon, C. McMurray (1998)
GAA instability in Friedreich's Ataxia shares a common, DNA-directed and intraallelic mechanism with other trinucleotide diseases.Molecular cell, 1 4
M. Krasilnikova, S. Mirkin (2004)
Replication Stalling at Friedreich's Ataxia (GAA)n Repeats In VivoMolecular and Cellular Biology, 24
S. Mirkin (2006)
DNA structures, repeat expansions and human hereditary disorders.Current opinion in structural biology, 16 3
Stéphane Schmucker, H. Puccio (2010)
Understanding the molecular mechanisms of Friedreich's ataxia to develop therapeutic approaches.Human molecular genetics, 19 R1
G. Samadashwily, G. Raca, S. Mirkin (1997)
Trinucleotide repeats affect DNA replication in vivoNature Genetics, 17
M. Benard, C. Maric, Gérard Pierron (2001)
DNA replication-dependent formation of joint DNA molecules in Physarum polycephalum.Molecular cell, 7 5
N. Sakamoto, P. Chastain, P. Parniewski, Keiichi Ohshima, M. Pandolfo, J. Griffith, R. Wells (1999)
Sticky DNA: self-association properties of long GAA.TTC repeats in R.R.Y triplex structures from Friedreich's ataxia.Molecular cell, 3 4
Alexander Shishkin, I. Voineagu, R. Matera, Nicole Cherng, Brook Chernet, M. Krasilnikova, V. Narayanan, K. Lobachev, S. Mirkin (2009)
Large-scale expansions of Friedreich's ataxia GAA repeats in yeast.Molecular cell, 35 1
M. Frank-Kamenetskii, S. Mirkin (1995)
Triplex DNA structures.Annual review of biochemistry, 64
Hyun-Min Kim, V. Narayanan, P. Mieczkowski, T. Petes, M. Krasilnikova, S. Mirkin, K. Lobachev (2008)
Chromosome fragility at GAA tracts in yeast depends on repeat orientation and requires mismatch repairThe EMBO Journal, 27
Paul Rindler, R. Clark, Laura Pollard, I. Biase, S. Bidichandani (2006)
Replication in mammalian cells recapitulates the locus-specific differences in somatic instability of genomic GAA triplet-repeatsNucleic Acids Research, 34
I. Kovtun, Yuan Liu, M. Bjørås, A. Klungland, Samuel Wilson, C. McMurray (2007)
OGG1 initiates age-dependent CAG trinucleotide expansion in somatic cellsNature, 447
M. Glazkov (2011)
Loop organization of eukaryotic chromosomes and triple-stranded DNA structuresMolecular Biology, 45
Cindy Follonier, M. Lopes (2014)
Combined bidimensional electrophoresis and electron microscopy to study specific plasmid DNA replication intermediates in human cells.Methods in molecular biology, 1094
V. Malkov, O. Voloshin, V. Soyfer, M. Frank-Kamenetskii (1993)
Cation and sequence effects on stability of intermolecular pyrimidine-purine-purine triplex.Nucleic acids research, 21 3
L. Son, A. Bacolla, R. Wells (2006)
Sticky DNA: in vivo formation in E. coli and in vitro association of long GAA*TTC tracts to generate two independent supercoiled domains.Journal of molecular biology, 360 2
S. Mirkin, E. Smirnova (2002)
Positioned to expandNature Genetics, 31
Wei Tang, M. Dominska, P. Greenwell, Zachary Harvanek, K. Lobachev, Hyun-Min Kim, V. Narayanan, S. Mirkin, T. Petes (2011)
Friedreich's Ataxia (GAA)n•(TTC)n Repeats Strongly Stimulate Mitotic Crossovers in Saccharomyces cerevisaePLoS Genetics, 7
Paul Rindler, S. Bidichandani (2010)
Role of transcript and interplay between transcription and replication in triplet-repeat instability in mammalian cellsNucleic Acids Research, 39
S. Mirkin (2007)
Expandable DNA repeats and human diseaseNature, 447
V. Potaman, E. Oussatcheva, Yuri Lyubchenko, L. Shlyakhtenko, S. Bidichandani, Tetsuo Ashizawa, R. Sinden (2004)
Length-dependent structure formation in Friedreich ataxia (GAA)n*(TTC)n repeats at neutral pH.Nucleic acids research, 32 3
R. Kalejta, J. Hamlin (1996)
Composite patterns in neutral/neutral two-dimensional gels demonstrate inefficient replication origin usageMolecular and Cellular Biology, 16
K. Ohshima, L. Montermini, R. Wells, M. Pandolfo (1998)
Inhibitory Effects of Expanded GAA·TTC Triplet Repeats from Intron I of the Friedreich Ataxia Gene on Transcription and Replicationin Vivo *The Journal of Biological Chemistry, 273
M. Segurado, María Gómez, F. Antequera (2002)
Increased recombination intermediates and homologous integration hot spots at DNA replication origins.Molecular cell, 10 4
S. Raghavan, M. Lieber (2006)
DNA structures at chromosomal translocation sites.BioEssays : news and reviews in molecular, cellular and developmental biology, 28 5
Alexandre Vetcher, M. Napierala, R. Iyer, P. Chastain, J. Griffith, R. Wells (2002)
Sticky DNA, a Long GAA·GAA·TTC Triplex That Is Formed Intramolecularly, in the Sequence of Intron 1 of the Frataxin Gene*The Journal of Biological Chemistry, 277
(2006)
in vivo formation in E
Visualization and interpretation of eukaryotic DNA replication intermediates by electron microscopy in vivo
A. Kerrest, Ranjith Anand, Rangapriya Sundararajan, Rodrigo Bermejo, G. Liberi, B. Dujon, C. Freudenreich, G. Richard (2009)
SRS2 and SGS1 prevent chromosomal breaks and stabilize triplet repeats by restraining recombinationNature Structural &Molecular Biology, 16
C. McMurray (2010)
Mechanisms of trinucleotide repeat instability during human developmentNature Reviews Genetics, 11
P. Beal, P. Dervan (1992)
The influence of single base triplet changes on the stability of a pur.pur.pyr triple helix determined by affinity cleaving.Nucleic acids research, 20 11
Isabelle Lucas, O. Hyrien (2000)
Hemicatenanes form upon inhibition of DNA replication.Nucleic acids research, 28 10
Gurangad Chandok, M.P. Patel, S. Mirkin, M. Krasilnikova (2012)
Effects of Friedreich's ataxia GAA repeats on DNA replication in mammalian cellsNucleic Acids Research, 40
(2002)
effect of the polypurine
M. Pandolfo (2009)
Friedreich ataxia: The clinical pictureJournal of Neurology, 256
D. Duckett, A. Murchie, S. Diekmann, E. Kitzing, B. Kemper, D. Lilley (1988)
The structure of the holliday junction, and its resolutionCell, 55
C. Freudenreich, S. Kantrow, V. Zakian (1998)
Expansion and length-dependent fragility of CTG repeats in yeast.Science, 279 5352
I. Voineagu, Christine Surka, Alexander Shishkin, M. Krasilnikova, S. Mirkin (2009)
Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragilityNature Structural &Molecular Biology, 16
G. Liberi, Cecilia Cotta-Ramusino, M. Lopes, J. Sogo, C. Conti, A. Bensimon, M. Foiani (2006)
Methods to study replication fork collapse in budding yeast.Methods in enzymology, 409
Hui Zou, R. Rothstein (1997)
Holliday Junctions Accumulate in Replication Mutants via a RecA Homolog-Independent MechanismCell, 90
N. Fouché, Sezgin Özgür, D. Roy, J. Griffith (2006)
Replication fork regression in repetitive DNAsNucleic Acids Research, 34
G. Hughes (2009)
The clinical picture
Alexandre Vetcher, M. Napierala, R. Wells (2002)
Sticky DNA: Effect of the Polypurine·Polypyrimidine Sequence*The Journal of Biological Chemistry, 277
J. Sogo, H. Stahl, T. Koller, R. Knippers (1986)
Structure of replicating simian virus 40 minichromosomes. The replication fork, core histone segregation and terminal structures.Journal of molecular biology, 189 1
B. Brewer, W. Fangman (1987)
The localization of replication origins on ARS plasmids in S. cerevisiaeCell, 51
J. Cleary, K. Nichol, Yuh-Hwa Wang, C. Pearson (2002)
Evidence of cis-acting factors in replication-mediated trinucleotide repeat instability in primate cellsNature Genetics, 31
M. Lopes (2009)
Electron microscopy methods for studying in vivo DNA replication intermediates.Methods in molecular biology, 521
M. Lopes, Cecilia Cotta-Ramusino, G. Liberi, M. Foiani (2003)
Branch migrating sister chromatid junctions form at replication origins through Rad51/Rad52-independent mechanisms.Molecular cell, 12 6
Danielle Daee, Tony Mertz, R. Lahue (2006)
Postreplication Repair Inhibits CAG · CTG Repeat Expansions in Saccharomyces cerevisiaeMolecular and Cellular Biology, 27
N. Sinha, C. Morris, B. Alberts (1980)
Efficient in vitro replication of double-stranded DNA templates by a purified T4 bacteriophage replication system.The Journal of biological chemistry, 255 9
Scott Ditch, Mimi Sammarco, A. Banerjee, E. Grabczyk (2009)
Progressive GAA·TTC Repeat Expansion in Human Cell LinesPLoS Genetics, 5
K. Ziegler, T. Bui, R. Frisque, A. Grandinetti, V. Nerurkar (2004)
A rapid in vitro polyomavirus DNA replication assay.Journal of virological methods, 122 1
Juan Miret, L. Pessoa-Brandão, R. Lahue (1998)
Orientation-dependent and sequence-specific expansions of CTG/CAG trinucleotide repeats in Saccharomyces cerevisiae.Proceedings of the National Academy of Sciences of the United States of America, 95 21
Friedreich's ataxia is one of several hereditary neurodegenerative disorders caused expansion of trinucleotide repeats, but the mechanism of their genomic propagation is unknown. A new plasmid-based system to probe human replicative intermediates reveals that GAA/TTC repeats interfere with replication, thus suggesting that repeat expansion occurs by postreplicative mechanisms.
Nature Structural & Molecular Biology – Springer Journals
Published: Mar 3, 2013
Read and print from thousands of top scholarly journals.
Already have an account? Log in
Bookmark this article. You can see your Bookmarks on your DeepDyve Library.
To save an article, log in first, or sign up for a DeepDyve account if you don’t already have one.
Copy and paste the desired citation format or use the link below to download a file formatted for EndNote
Access the full text.
Sign up today, get DeepDyve free for 14 days.
All DeepDyve websites use cookies to improve your online experience. They were placed on your computer when you launched this website. You can change your cookie settings through your browser.