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For each group found above
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The cutoff for fractional overlap between images, which is used in the initial inference of syntopy by the single coverage method. (Default = 0.5.
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For each pair of defined elements that form alignments
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The ratio cutoff for splitting an element at a given position used in the element reevaluation and update procedure
Genome Research – Unpaywall
Published: Jul 19, 2002
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