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Christopher Jones, B. Stres, M. Rosenquist, S. Hallin (2008)
Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification.Molecular biology and evolution, 25 9
G. Grundmann, A. Dechesne, F. Bartoli, J. Flandrois, J. Chassé, R. Kizungu (2001)
Spatial Modeling of Nitrifier Microhabitats in SoilSoil Science Society of America Journal, 65
S. Hallin, Christopher Jones, M. Schloter, L. Philippot (2009)
Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experimentThe ISME Journal, 3
Mark Coyne, A. Arunakumari, B. Averill, J. Tiedje (1989)
Immunological identification and distribution of dissimilatory heme cd1 and nonheme copper nitrite reductases in denitrifying bacteriaApplied and Environmental Microbiology, 55
C. Knapp, W. Dodds, Kymberly Wilson, J. O’Brien, D. Graham (2009)
Spatial heterogeneity of denitrification genes in a highly homogenous urban stream.Environmental science & technology, 43 12
M. Cavigelli, L. Lengnick, J. Buyer, D. Fravel, Z. Handoo, G. McCarty, P. Millner, L. Sikora, S. Wright, B. Vinyard, M. Rabenhorst (2005)
Landscape level variation in soil resources and microbial properties in a no-till corn fieldApplied Soil Ecology, 29
Jessica Green, A. Holmes, M. Westoby, I. Oliver, D. Briscoe, Mark Dangerfield, M. Gillings, A. Beattie (2004)
Spatial scaling of microbial eukaryote diversityNature, 432
M. Ellis, J. Grossmann, R. Eady, S. Hasnain (2007)
Genomic analysis reveals widespread occurrence of new classes of copper nitrite reductasesJBIC Journal of Biological Inorganic Chemistry, 12
M. Horner-Devine, K. Carney, B. Bohannan (2004)
An ecological perspective on bacterial biodiversityProceedings of the Royal Society of London. Series B: Biological Sciences, 271
T. Bell, J. Newman, Bernard Silverman, S. Turner, A. Lilley (2005)
The contribution of species richness and composition to bacterial servicesNature, 436
R. Comia, M. Stenberg, P. Nelson, T. Rydberg, I. Håkansson (1994)
Soil and crop responses to different tillage systemsSoil & Tillage Research, 29
Jessica Green, B. Bohannan, Rachel Whitaker (2008)
Microbial Biogeography: From Taxonomy to TraitsScience, 320
T. Parkin (1993)
Spatial Variability of Microbial Processes in Soil—A ReviewJournal of Environmental Quality, 22
N. Nunan, K. Wu, I. Young, J. Crawford, K. Ritz (2002)
In Situ Spatial Patterns of Soil Bacterial Populations, Mapped at Multiple Scales, in an Arable SoilMicrobial Ecology, 44
L. Philippot, J. Čuhel, N. Saby, D. Chèneby, Alice Chroňáková, D. Bru, D. Arrouays, F. Martin-Laurent, M. Šimek (2009)
Mapping field-scale spatial patterns of size and activity of the denitrifier community.Environmental microbiology, 11 6
S. Wakelin, L. Macdonald, S. Rogers, Adrienne Gregg, T. Bolger, J. Baldock (2008)
Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soilsSoil Biology & Biochemistry, 40
C. Bremer, G. Braker, D. Matthies, Andreas Reuter, C. Engels, R. Conrad (2007)
Impact of Plant Functional Group, Plant Species, and Sampling Time on the Composition of nirK-Type Denitrifier Communities in SoilApplied and Environmental Microbiology, 73
G. Robertson, Michael Hutson, Francis Evans, J. Tiedje (1988)
Spatial Variability in a Successional Plant Community: Patterns of Nitrogen AvailabilityEcology, 69
I. Florinsky, S. McMahon, D. Burton (2004)
Topographic control of soil microbial activity: a case study of denitrifiersGeoderma, 119
Jessica Green, B. Bohannan (2006)
Spatial scaling of microbial biodiversity.Trends in ecology & evolution, 21 9
C. Helander, K. Delin (2004)
Evaluation of farming systems according to valuation indices developed within a European network on integrated and ecological arable farming systemsEuropean Journal of Agronomy, 21
D. Hillel (1980)
1 – The Task of Soil Physics
Karin Enwall, L. Philippot, S. Hallin (2005)
Activity and Composition of the Denitrifying Bacterial Community Respond Differently to Long-Term FertilizationApplied and Environmental Microbiology, 71
Jason Smith, A. Ogram (2008)
Genetic and Functional Variation in Denitrifier Populations along a Short-Term Restoration ChronosequenceApplied and Environmental Microbiology, 74
L. Philippot, S. Hallin, M. Schloter (2007)
Ecology of Denitrifying Prokaryotes in Agricultural SoilAdvances in Agronomy, 96
A. Patra, L. Abbadie, A. Clays-Josserand, V. Degrange, S. Grayston, P. Loiseau, F. Louault, S. Mahmood, S. Nazaret, L. Philippot, F. Poly, J. Prosser, A. Richaume, X. Roux (2005)
EFFECTS OF GRAZING ON MICROBIAL FUNCTIONAL GROUPS INVOLVED IN SOIL N DYNAMICSEcological Monographs, 75
V. Torsvik, L. Øvreås, T. Thingstad (2002)
Prokaryotic Diversity--Magnitude, Dynamics, and Controlling FactorsScience, 296
I. Throbäck, Karin Enwall, Å. Jarvis, S. Hallin (2004)
Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE.FEMS microbiology ecology, 49 3
Andrea Glockner, A. Jüngst, W. Zumft (1993)
Copper-containing nitrite reductase from Pseudomonas aureofaciens is functional in a mutationally cytochrome cd1-free background (NirS−) of Pseudomonas stutzeriArchives of Microbiology, 160
L. Philippot, S. Hallin (2005)
Finding the missing link between diversity and activity using denitrifying bacteria as a model functional community.Current opinion in microbiology, 8 3
(1960)
Untersuchungen über die chemische Bodenanalyse als Grundlage für die Beurteilung der Nährstoffzustandes der Böden II. Chemische Extraktions-methoden zur Phosphor und Kaliumbestimmung
C. Lauber, M. Hamady, R. Knight, N. Fierer (2009)
Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental ScaleApplied and Environmental Microbiology, 75
W. Cookson, D. Murphy, M. Roper (2008)
Characterizing the relationships between soil organic matter components and microbial function and composition along a tillage disturbance gradientSoil Biology & Biochemistry, 40
S. Hallin, I. Throbäck, J. Dicksved, M. Pell (2006)
Metabolic Profiles and Genetic Diversity of Denitrifying Communities in Activated Sludge after Addition of Methanol or EthanolApplied and Environmental Microbiology, 72
G. Robertson, K. Klingensmith, M. Klug, E. Paul, J. Crum, B. Ellis (1997)
SOIL RESOURCES, MICROBIAL ACTIVITY, AND PRIMARY PRODUCTION ACROSS AN AGRICULTURAL ECOSYSTEMEcological Applications, 7
R. Gentleman, Ross Ihaka (2000)
Lexical Scope and Statistical ComputingJournal of Computational and Graphical Statistics, 9
W. Zumft (1997)
Cell biology and molecular basis of denitrification.Microbiology and molecular biology reviews : MMBR, 61 4
B. Oakley, C. Francis, K. Roberts, C. Fuchsman, Sujatha Srinivasan, J. Staley (2007)
Analysis of nitrite reductase (nirK and nirS) genes and cultivation reveal depauperate community of denitrifying bacteria in the Black Sea suboxic zone.Environmental microbiology, 9 1
L. Philippot, D. Bru, N. Saby, J. Čuhel, D. Arrouays, M. Šimek, S. Hallin (2009)
Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree.Environmental microbiology, 11 12
(2003)
Structural Equation Modeling: Examining the relationship between environmental variables and ordination axes using latent variables and structural equation modeling
D. Buckley, T. Schmidt (2001)
The structure of microbial communities in soil and the lasting impact of cultivationMicrobial Ecology, 42
S. Hallin, P. Lindgren (1999)
PCR Detection of Genes Encoding Nitrite Reductase in Denitrifying BacteriaApplied and Environmental Microbiology, 65
Yucheng Feng, A. Motta, D. Reeves, C. Burmester, E. Santen, J. Osborne (2003)
Soil microbial communities under conventional-till and no-till continuous cotton systemsSoil Biology & Biochemistry, 35
(2005)
New strategy for farm-soil mapping using near infrared spectroscopy to increase sample point density
(2007)
vegan: community ecology package, version 1.8-5
D. Hillel (1980)
Applications of soil physics
S. Levin (1992)
The problem of pattern and scale in ecologyEcology, 73
M. Girvan, J. Bullimore, J. Pretty, A. Osborn, A. Ball (2003)
Soil Type Is the Primary Determinant of the Composition of the Total and Active Bacterial Communities in Arable SoilsApplied and Environmental Microbiology, 69
G. Anderson, J. Pidgeon, H. Spencer, R. Parks (1980)
A NEW HAND‐HELD RECORDING PENETROMETER FOR SOIL STUDIESEuropean Journal of Soil Science, 31
L. Wittebolle, M. Marzorati, L. Clement, Annalisa Balloi, D. Daffonchio, K. Heylen, P. Vos, W. Verstraete, N. Boon (2009)
Initial community evenness favours functionality under selective stressNature, 458
M. Stenberg, B. Stenberg, T. Rydberg (2000)
Effects of reduced tillage and liming on microbial activity and soil properties in a weakly-structured soil.Applied Soil Ecology, 14
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Published: Jan 30, 2010
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