Access the full text.
Sign up today, get DeepDyve free for 14 days.
E. Domingo, J. Holland (1997)
RNA virus mutations and fitness for survival.Annual review of microbiology, 51
S. Sarker, Kathy Moylan, S. Ghorashi, J. Forwood, A. Peters, S. Raidal (2015)
Evidence of a deep viral host switch event with beak and feather disease virus infection in rainbow bee-eaters (Merops ornatus)Scientific Reports, 5
M. Rahaus, M. Wolff (2003)
Psittacine beak and feather disease: a first survey of the distribution of beak and feather disease virus inside the population of captive psittacine birds in Germany.Journal of veterinary medicine. B, Infectious diseases and veterinary public health, 50 8
S. Sarker, Edward Patterson, A. Peters, G. Baker, J. Forwood, S. Ghorashi, M. Holdsworth, Rupert Baker, N. Murray, S. Raidal (2014)
Mutability Dynamics of an Emergent Single Stranded DNA Virus in a Naïve HostPLoS ONE, 9
Chih-Ming Hsu, Ching-Yi Ko, H. Tsai (2006)
Detection and Sequence Analysis of Avian Polyomavirus and Psittacine Beak and Feather Disease Virus from Psittacine Birds in Taiwan, 50
D. Darriba, G. Taboada, R. Doallo, D. Posada (2012)
CircadiOmics: integrating circadian genomics, transcriptomics, proteomics and metabolomicsNature Methods, 9
B. Muhire, A. Varsani, D. Martin (2014)
SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity CalculationPLoS ONE, 9
B. Ritchie, F. Niagro, P. Lukert, W. Steffens, K. Latimer (1989)
Characterization of a new virus from cockatoos with psittacine beak and feather disease.Virology, 171 1
Alex Olvera, M. Cortey, Joaquim Segalés (2007)
Molecular evolution of porcine circovirus type 2 genomes: phylogeny and clonality.Virology, 357 2
R. Doneley (2003)
Acute beak and feather disease in juvenile African Grey parrots--an uncommon presentation of a common disease.Australian veterinary journal, 81 4
L. Heath, E. Walt, A. Varsani, D. Martin (2006)
Recombination Patterns in Aphthoviruses Mirror Those Found in Other PicornavirusesJournal of Virology, 80
S. Sarker, S. Ghorashi, J. Forwood, S. Bent, A. Peters, S. Raidal (2014)
Phylogeny of beak and feather disease virus in cockatoos demonstrates host generalism and multiple-variant infections within Psittaciformes.Virology, 460-461
E. Circella, M. Legretto, N. Pugliese, A. Caroli, G. Bozzo, G. Accogli, A. Lavazza, A. Camarda (2014)
Psittacine Beak and Feather Disease–like Illness in Gouldian Finches (Chloebia gouldiae), 58
D. Pass, R. Perry (1984)
The pathology of psittacine beak and feather disease.Australian veterinary journal, 61 3
A. Peters, Edward Patterson, Barry Baker, M. Holdsworth, S. Sarker, S. Ghorashi, S. Raidal (2014)
EVIDENCE OF PSITTACINE BEAK AND FEATHER DISEASE VIRUS SPILLOVER INTO WILD CRITICALLY ENDANGERED ORANGE-BELLIED PARROTS (NEOPHEMA CHRYSOGASTER), 50
F. Niagro, A. Forsthoefel, R. Lawther, L. Kamalanathan, B. Ritchie, Kenneth Latimer, Phil Lukert (1998)
Beak and feather disease virus and porcine circovirus genomes: intermediates between the geminiviruses and plant circovirusesArchives of Virology, 143
G. Harkins, D. Martin, A. Christoffels, A. Varsani (2014)
Towards inferring the global movement of beak and feather disease virus.Virology, 450-451
G. Crawford (1994)
Circoviridae: new viruses of pigs, parrots and chickens.Australian veterinary journal, 71 10
A. Varsani, Guy Regnard, R. Bragg, I. Hitzeroth, E. Rybicki (2011)
Global genetic diversity and geographical and host-species distribution of beak and feather disease virus isolates.The Journal of general virology, 92 Pt 4
E. Bert, L. Tomassone, C. Peccati, Marta Navarrete, S. Sola (2005)
Detection of beak and feather disease virus (BFDV) and avian polyomavirus (APV) DNA in psittacine birds in Italy.Journal of veterinary medicine. B, Infectious diseases and veterinary public health, 52 2
Shu-Ming Kuo, H. Kao, M. Hou, Ching-Ho Wang, Siou-Hong Lin, H. Su (2012)
Evolution of infectious bronchitis virus in Taiwan: Positively selected sites in the nucleocapsid protein and their effects on RNA-binding activityVeterinary Microbiology, 162
S. Raidal, C. McElnea, G. Cross (1993)
Seroprevalence of psittacine beak and feather disease in wild psittacine birds in New South Wales.Australian veterinary journal, 70 4
Laurel Julian, T. Piasecki, K. Chrzastek, M. Walters, B. Muhire, G. Harkins, D. Martin, A. Varsani (2013)
Extensive recombination detected among beak and feather disease virus isolates from breeding facilities in Poland.The Journal of general virology, 94 Pt 5
H. Ha, I. Anderson, M. Alley, B. Springett, B. Gartrell (2007)
The prevalence of beak and feather disease virus infection in wild populations of parrots and cockatoos in New ZealandNew Zealand Veterinary Journal, 55
S. Sarker, C. Lloyd, J. Forwood, S. Raidal (2016)
Forensic genetic evidence of beak and feather disease virus infection in a Powerful Owl, Ninox strenuaEmu - Austral Ornithology, 116
D Darriba, GL Taboada, R Doallo, D Posada (2012)
jMdolTest 2: more models, new heuristics and parallel computingNat Methods, 9
Beak and feather disease virus (BFDV) is an avian circovirus, and it has a single-stranded DNA genome. It causes a fatal disease in parrots called psittacine beak and feather disease (PBFD). After screening of samples collected from Taiwan using PCR, complete genome sequences of isolates from 21 samples from various species of parrot were obtained. The nucleotide sequences of the replication-associated protein gene (rep) and the amino acid sequences of the replication-associated protein (Rep) were more conserved than the nucleotide sequences of the capsid protein gene (cp) and the amino acid sequences of the capsid protein (CP). In Bayesian phylogenetic analysis, the topology of the complete genome sequence was similar to that of the rep gene alone. Recombination events were identified in Taiwan isolates. Recombination hot spots were mainly located in the intergenic region between the 3’ ends of the rep and cp genes and at the 5’ end of the cp gene. The 5’ end and the middle of the rep gene were found to be recombination cold spots. Despite the overall negative selection that was observed for the rep and cp genes, one and 18 positive selected sites were found for the rep and cp gene, respectively.
Archives of Virology – Springer Journals
Published: Jul 7, 2016
Read and print from thousands of top scholarly journals.
Already have an account? Log in
Bookmark this article. You can see your Bookmarks on your DeepDyve Library.
To save an article, log in first, or sign up for a DeepDyve account if you don’t already have one.
Copy and paste the desired citation format or use the link below to download a file formatted for EndNote
Access the full text.
Sign up today, get DeepDyve free for 14 days.
All DeepDyve websites use cookies to improve your online experience. They were placed on your computer when you launched this website. You can change your cookie settings through your browser.