The genome sequence of a novel simian adenovirus in a chimpanzee reveals a close relationship to human adenoviruses

The genome sequence of a novel simian adenovirus in a chimpanzee reveals a close relationship to... Recently, several reports have revealed that some simian adenoviruses (AdVs) strains show a close relationship to human AdVs. In the present study, a simian AdV strain named SAdV-ch1 was detected in chimpanzees in China, and its complete genome was determined. Phylogenetic analysis revealed SAdV-ch1 clustering in a clade that was separate from all of the other simian AdVs but genetically close to a human AdV strain, HAdV-18 (GenBank no. GU191019), sharing 92.5 % sequence identity with it. Recombination analysis provided evidence that a recombination event had occurred between SAdV-ch1 and HAdV-61 (JF964962), where SAdV-ch1 exchanged partial of its hexon gene segment with HAdV-61, leading to the recombinant HAdV-31 (AM749299). http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Archives of Virology Springer Journals

The genome sequence of a novel simian adenovirus in a chimpanzee reveals a close relationship to human adenoviruses

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Publisher
Springer Journals
Copyright
Copyright © 2014 by Springer-Verlag Wien
Subject
Biomedicine; Virology; Medical Microbiology; Infectious Diseases
ISSN
0304-8608
eISSN
1432-8798
D.O.I.
10.1007/s00705-013-1967-1
Publisher site
See Article on Publisher Site

Abstract

Recently, several reports have revealed that some simian adenoviruses (AdVs) strains show a close relationship to human AdVs. In the present study, a simian AdV strain named SAdV-ch1 was detected in chimpanzees in China, and its complete genome was determined. Phylogenetic analysis revealed SAdV-ch1 clustering in a clade that was separate from all of the other simian AdVs but genetically close to a human AdV strain, HAdV-18 (GenBank no. GU191019), sharing 92.5 % sequence identity with it. Recombination analysis provided evidence that a recombination event had occurred between SAdV-ch1 and HAdV-61 (JF964962), where SAdV-ch1 exchanged partial of its hexon gene segment with HAdV-61, leading to the recombinant HAdV-31 (AM749299).

Journal

Archives of VirologySpringer Journals

Published: Jul 1, 2014

References

  • Genotype differentiation of Agamid Adenovirus 1 in bearded dragons (Pogona vitticeps) in the USA by hexon gene sequence
    Parkin, DB; Archer, LL; Childress, AL; Wellehan, JF
  • Introducing reptiles into a captive collection: the role of the veterinarian
    Pasmans, F; Blahak, S; Martel, A; Pantchev, N
  • RDP2: recombination detection and analysis from sequence alignments
    Martin, DP; Williamson, C; Posada, D
  • Molecular detection of novel adenoviruses in fecal specimens of captive monkeys with diarrhea in China
    Bányai, K; Esona, MD; Liu, A; Wang, Y; Tu, X; Jiang, B

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