Plant Cell Rep (2017) 36:1417–1426 DOI 10.1007/s00299-017-2165-5 ORIGINAL ARTICLE Seed weight differences between wild and domesticated soybeans are associated with speciﬁc changes in gene expression 1,2 3 2 2 2 • • • • • Chao Yu Zhipeng Qu Yueting Zhang Xifeng Zhang Tingting Lan 3 2 1,2 • • David L. Adelson Dong Wang Youlin Zhu Received: 21 April 2017 / Accepted: 8 June 2017 / Published online: 26 June 2017 Springer-Verlag GmbH Germany 2017 Abstract strand-speciﬁc RNA sequencing. Differentially expressed Key message Our study systematically explored poten- genes related to seed weight were identiﬁed, and some of tial genes and molecular pathways as candidates for their homologs were associated with seed development differences in seed weight resulting from soybean in Arabidopsis. We also identiﬁed 1251 long intergenic domestication. In addition, potential contributions of noncoding RNAs (lincRNAs), 243 intronic RNAs and 81 lncRNAs to seed weight were also investigated. antisense lncRNAs de novo from these soybean tran- Abstract Soybeans have a long history of domestication scriptomes. We then proﬁled the expression patterns of in China, and there are several signiﬁcant phenotypic lncRNAs in cultivated and wild soybean seeds, and differences between cultivated and wild soybeans, for found that
Plant Cell Reports – Springer Journals
Published: Jun 26, 2017
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