Phylogeographic analysis of Japanese encephalitis virus in India (1956-2012)

Phylogeographic analysis of Japanese encephalitis virus in India (1956-2012) Japanese encephalitis virus (JEV) isolates from India phylogenetically belong to two genotypes, III and I. We used envelope gene sequences from GenBank, representing different states of India and other countries, to study the spatiotemporal transmission histories of these two JEV genotypes separately. Genotype III was found to have been successively introduced in the 1930s, 1950s and 1960s, followed by genotype I twice around 2003-2006. Changes in JEV disease patterns in India over the last five decades could thus be attributed to multiple introductions of JEV strains from neighboring Asian countries along with increased transmission potential due to altered ecological settings. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Archives of Virology Springer Journals

Phylogeographic analysis of Japanese encephalitis virus in India (1956-2012)

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Publisher
Springer Vienna
Copyright
Copyright © 2015 by Springer-Verlag Wien
Subject
Biomedicine; Virology; Medical Microbiology; Infectious Diseases
ISSN
0304-8608
eISSN
1432-8798
D.O.I.
10.1007/s00705-015-2599-4
Publisher site
See Article on Publisher Site

Abstract

Japanese encephalitis virus (JEV) isolates from India phylogenetically belong to two genotypes, III and I. We used envelope gene sequences from GenBank, representing different states of India and other countries, to study the spatiotemporal transmission histories of these two JEV genotypes separately. Genotype III was found to have been successively introduced in the 1930s, 1950s and 1960s, followed by genotype I twice around 2003-2006. Changes in JEV disease patterns in India over the last five decades could thus be attributed to multiple introductions of JEV strains from neighboring Asian countries along with increased transmission potential due to altered ecological settings.

Journal

Archives of VirologySpringer Journals

Published: Dec 1, 2015

References

  • Japanese encephalitis in India: an overview
    Kabilan, L; Rajendran, R; Arunachalam, N; Ramesh, S; Srinivasan, S; Samuel, PP; Dash, AP
  • SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
    Bielejec, F; Rambaut, A; Suchard, MA; Lemey, P
  • Global phylogeography of Dengue type 1 and 2 viruses reveals the role of India
    Walimbe, AM; Lotankar, M; Cecilia, D; Cherian, SS
  • First indigenous transmission of Japanese encephalitis in urban areas of national capital territory of Delhi, India
    Kumari, R; Kumar, K; Rawat, A; Singh, G; Yadav, NK; Chauhan, LS

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