Mutations in the SIV env and the M13 lacZa gene generatedin vitro by reverse transcriptases and DNA polymerases

Mutations in the SIV env and the M13 lacZa gene generatedin vitro by reverse transcriptases and... To investigate the accuracy of retroviral in vitro DNA replication we have examined with two fidelity assays the reverse transcriptases (RTs) from , HIV-1, MoMLV as well for comparison the Klenow fragment from E. coli and DNA polymerase a from calf-thymus. These forward mutation assays measured the loss of bacteriophage M13 lacZa gene function by mutations. In the EnvlacZ a assay frameshift mutations occurring during polymerisation of a 176 b long simian immunodeficiency virus (SIV) envelope ( env ) sequence were phenotypically detected by blue/white-plaque screening. To measure in addition substitutions, a 116 b long M13 lacZa gene DNA template was used as the mutational target (LacZ a assay). With the gene DNA template, we observed similar levels of frameshift fidelity for all three RTs. Nevertheless, the RT was slightly more accurate than the other RTs and nearly all frameshifts were observed at two homopolymeric runs of its homologous template. Measuring also substitution errors at the lacZa template the mutation frequency of the RT increased 2.5 fold and that of the HIV-1 RT was enhanced by a factor of 3. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Archives of Virology Springer Journals

Mutations in the SIV env and the M13 lacZa gene generatedin vitro by reverse transcriptases and DNA polymerases

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Publisher
Springer-Verlag
Copyright
Copyright © Wien by 1997 Springer-Verlag/
Subject
Legacy
ISSN
0304-8608
eISSN
1432-8798
D.O.I.
10.1007/s007050050148
Publisher site
See Article on Publisher Site

Abstract

To investigate the accuracy of retroviral in vitro DNA replication we have examined with two fidelity assays the reverse transcriptases (RTs) from , HIV-1, MoMLV as well for comparison the Klenow fragment from E. coli and DNA polymerase a from calf-thymus. These forward mutation assays measured the loss of bacteriophage M13 lacZa gene function by mutations. In the EnvlacZ a assay frameshift mutations occurring during polymerisation of a 176 b long simian immunodeficiency virus (SIV) envelope ( env ) sequence were phenotypically detected by blue/white-plaque screening. To measure in addition substitutions, a 116 b long M13 lacZa gene DNA template was used as the mutational target (LacZ a assay). With the gene DNA template, we observed similar levels of frameshift fidelity for all three RTs. Nevertheless, the RT was slightly more accurate than the other RTs and nearly all frameshifts were observed at two homopolymeric runs of its homologous template. Measuring also substitution errors at the lacZa template the mutation frequency of the RT increased 2.5 fold and that of the HIV-1 RT was enhanced by a factor of 3.

Journal

Archives of VirologySpringer Journals

Published: Jun 1, 1997

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