Identification of recombination between Muscovy duck parvovirus and goose parvovirus structural protein genes

Identification of recombination between Muscovy duck parvovirus and goose parvovirus structural... Waterfowl parvoviruses are divided into Muscovy duck parvoviruses (MDPVs) and goose parvoviruses (GPVs). Phylogenetic analysis based on structural gene nucleotide sequences showed that the strains of three GPVs (DY, PT and D strains) and two MDPVs (GX5 and SAAH-SHNH) are closely related and formed one cluster. Recombination analysis showed that recombination between GPV-GDFsh and MDPV-89384/FRANCE strains led to five recombinant strains: GPV-DY, GPV-PT, GPV-D, MDPV-GX5 and MDPV-SAAH-SHNH. The recombinant event was confirmed using the Simplot program and phylogenetic analysis. This is the first comprehensive investigation of recombination between MDPV and GPV structural genes. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Archives of Virology Springer Journals

Identification of recombination between Muscovy duck parvovirus and goose parvovirus structural protein genes

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Publisher
Springer Journals
Copyright
Copyright © 2015 by Springer-Verlag Wien
Subject
Biomedicine; Virology; Medical Microbiology; Infectious Diseases
ISSN
0304-8608
eISSN
1432-8798
D.O.I.
10.1007/s00705-015-2541-9
Publisher site
See Article on Publisher Site

Abstract

Waterfowl parvoviruses are divided into Muscovy duck parvoviruses (MDPVs) and goose parvoviruses (GPVs). Phylogenetic analysis based on structural gene nucleotide sequences showed that the strains of three GPVs (DY, PT and D strains) and two MDPVs (GX5 and SAAH-SHNH) are closely related and formed one cluster. Recombination analysis showed that recombination between GPV-GDFsh and MDPV-89384/FRANCE strains led to five recombinant strains: GPV-DY, GPV-PT, GPV-D, MDPV-GX5 and MDPV-SAAH-SHNH. The recombinant event was confirmed using the Simplot program and phylogenetic analysis. This is the first comprehensive investigation of recombination between MDPV and GPV structural genes.

Journal

Archives of VirologySpringer Journals

Published: Oct 1, 2015

References

  • Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences
    Gibbs, MJ; Armstrong, JS; Gibbs, AJ
  • Complete genome sequence of goose parvovirus Y strain isolated from Muscovy ducks in China
    Liu, HM; Wang, H; Tian, XJ; Zhang, S; Zhou, XH; Qi, KZ; Pan, L
  • RDP2: recombination detection and analysis from sequence alignments
    Martin, DP; Williamson, C; Posada, D
  • Identification of a recombinant Muscovy duck parvovirus (MDPV) in Shanghai, China
    Zhu, Y; Zhou, Z; Huang, Y; Yu, R; Dong, S; Li, Z; Zhang, Y

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