Genetic dissection for zinc deficiency tolerance in rice using bi-parental mapping and association analysis

Genetic dissection for zinc deficiency tolerance in rice using bi-parental mapping and... Theor Appl Genet (2017) 130:1903–1914 DOI 10.1007/s00122-017-2932-2 ORIGINAL ARTICLE Genetic dissection for zinc deficiency tolerance in rice using bi‑parental mapping and association analysis 1 1 1 Jae‑Sung Lee · Andres Godwin C. Sajise · Glenn B. Gregorio · 1 1 2 Tobias Kretzschmar · Abdelbagi M. Ismail · Matthias Wissuwa Received: 17 February 2017 / Accepted: 30 May 2017 / Published online: 16 June 2017 © Springer-Verlag GmbH Germany 2017 Abstract 9 not present in the bi-parental population. Based on hap- Key message Zinc deficiency is a widespread soil con ‑ lotype analysis of the indica panel, biomass consistently straint in rice production. Here, we present QTL/ increased due to the minor ‘tolerance’ haplotypes, which candidate genes associated with Zn deficiency toler ‑ had frequencies between 13 and 34%. By utilizing the pre- ance identified through bi ‑ parental QTL mapping and vious transcript data collected from the same Zn-deficient genome‑ wide association analysis. field, we identified one putative candidate gene within the Abstract Zinc (Zn) deficiency is a widespread soil con - chromosome 6-QTL, which was associated with all traits straint in rice production. Despite several physiological in both analyses. Gene Os06g44220 was barely expressed studies elucidating Zn http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png TAG Theoretical and Applied Genetics Springer Journals

Genetic dissection for zinc deficiency tolerance in rice using bi-parental mapping and association analysis

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Publisher
Springer Berlin Heidelberg
Copyright
Copyright © 2017 by Springer-Verlag GmbH Germany
Subject
Life Sciences; Plant Breeding/Biotechnology; Plant Genetics and Genomics; Agriculture; Plant Biochemistry; Biochemistry, general; Biotechnology
ISSN
0040-5752
eISSN
1432-2242
D.O.I.
10.1007/s00122-017-2932-2
Publisher site
See Article on Publisher Site

Abstract

Theor Appl Genet (2017) 130:1903–1914 DOI 10.1007/s00122-017-2932-2 ORIGINAL ARTICLE Genetic dissection for zinc deficiency tolerance in rice using bi‑parental mapping and association analysis 1 1 1 Jae‑Sung Lee · Andres Godwin C. Sajise · Glenn B. Gregorio · 1 1 2 Tobias Kretzschmar · Abdelbagi M. Ismail · Matthias Wissuwa Received: 17 February 2017 / Accepted: 30 May 2017 / Published online: 16 June 2017 © Springer-Verlag GmbH Germany 2017 Abstract 9 not present in the bi-parental population. Based on hap- Key message Zinc deficiency is a widespread soil con ‑ lotype analysis of the indica panel, biomass consistently straint in rice production. Here, we present QTL/ increased due to the minor ‘tolerance’ haplotypes, which candidate genes associated with Zn deficiency toler ‑ had frequencies between 13 and 34%. By utilizing the pre- ance identified through bi ‑ parental QTL mapping and vious transcript data collected from the same Zn-deficient genome‑ wide association analysis. field, we identified one putative candidate gene within the Abstract Zinc (Zn) deficiency is a widespread soil con - chromosome 6-QTL, which was associated with all traits straint in rice production. Despite several physiological in both analyses. Gene Os06g44220 was barely expressed studies elucidating Zn

Journal

TAG Theoretical and Applied GeneticsSpringer Journals

Published: Jun 16, 2017

References

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