Access the full text.
Sign up today, get DeepDyve free for 14 days.
Bao Liu, J. Vega, M. Feldman (1998)
Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. II. Changes in low-copy coding DNA sequencesGenome, 41
D. Baulcombe (1999)
Viruses and gene silencing in plants.Archives of virology. Supplementum, 15
R. Cronn, R. Small, J. Wendel (1999)
Duplicated genes evolve independently after polyploid formation in cotton.Proceedings of the National Academy of Sciences of the United States of America, 96 25
L. Digby (1912)
The Cytology of Primula kewensis and of other related Primula HybridsAnnals of Botany
D. Soltis, P. Soltis (1995)
The dynamic nature of polyploid genomes.Proceedings of the National Academy of Sciences of the United States of America, 92 18
J. Wendel, A. Schnabel, T. Seelanan (1995)
Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium).Proceedings of the National Academy of Sciences of the United States of America, 92 1
B. Mcclintock (1965)
The control of gene action in maize
R. Whitkus, J. Doebley, M. Lee (1992)
Comparative genome mapping of Sorghum and maize.Genetics, 132 4
M. Ungerer, S. Baird, J. Pan, L. Rieseberg (1998)
Rapid hybrid speciation in wild sunflowers.Proceedings of the National Academy of Sciences of the United States of America, 95 20
C. Bachem, R. Hoeven, S. Bruijn, D. Vreugdenhil, M. Zabeau, R. Visser (1996)
Visualization of differential gene expression using a novel method of RNA fingerprinting based on AFLP: analysis of gene expression during potato tuber development.The Plant journal : for cell and molecular biology, 9 5
R. Fishel, R. Kolodner (1995)
Identification of mismatch repair genes and their role in the development of cancer.Current opinion in genetics & development, 5 3
L. Comai, A. Tyagi, Ken Winter, R. Holmes-Davis, S. Reynolds, Yvonne Stevens, B. Byers (2000)
Phenotypic Instability and Rapid Gene Silencing in Newly Formed Arabidopsis AllotetraploidsPlant Cell, 12
V. Meyer (1970)
A Facultative Gymnosperm from an Interspecific Cotton HybridScience, 169
M. Rhoades (1942)
Preferential Segregation in Maize.Genetics, 27 4
C. Rayssiguier, D. Thaler, M. Radman (1989)
The barrier to recombination between Escherichia coli and Salmonella typhimurium is disrupted in mismatch-repair mutantsNature, 342
S. Chambers, N. Hunter, E. Louis, R. Borts (1996)
The mismatch repair system reduces meiotic homeologous recombination and stimulates recombination-dependent chromosome lossMolecular and Cellular Biology, 16
M. Luo, J. Dubcovsky, J. Dvorak (1996)
Recognition of homeology by the wheat Ph1 locus.Genetics, 144 3
K. Song, Ping Lu, Keliang Tang, T. Osborn (1995)
Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution.Proceedings of the National Academy of Sciences of the United States of America, 92 17
Marie-Agnès Petit, Joan Dimpfl, Miroslav Radmant, Harrison Echols (1991)
Control of large chromosomal duplications in Escherichia coli by the mismatch repair system.Genetics, 129 2
A. D'Hont, Y. Lu, D. León, L. Grivet, P. Feldmann, C. Lanaud, J. Glaszmann (1994)
A molecular approach to unraveling the genetics of sugarcane, a complex polyploid of the Andropogoneae tribe.Genome, 37 2
J. Heslop-Harrison (1990)
Gene expression and parental dominance in hybrid plants.Development (Cambridge, England). Supplement
J. Burns, D. Gerstel (1967)
Flower color variegation and instability of a block of heterochromatin in Nicotiana.Genetics, 57 1
S. Wessler, T. Bureau, S. White (1995)
LTR-retrotransposons and MITEs: important players in the evolution of plant genomes.Current opinion in genetics & development, 5 6
Minttu Kansikas, Minna Nyström, P. Peltomäki (2006)
Mismatch Repair Genes
Andrew Flavell, Andrew Flavell, Stephen Pearce, Stephen Pearce, Amar Kumar, Amar Kumar (1994)
Plant transposable elements and the genome.Current opinion in genetics & development, 4 6
E. Finnegan, W. Peacock, E. Dennis (1996)
Reduced DNA methylation in Arabidopsis thaliana results in abnormal plant development.Proceedings of the National Academy of Sciences of the United States of America, 93 16
R. Martienssen (1998)
Chromosomal imprinting in plants.Current opinion in genetics & development, 8 2
J. Ramsey, D. Schemske (1998)
PATHWAYS, MECHANISMS, AND RATES OF POLYPLOID FORMATION IN FLOWERING PLANTSAnnual Review of Ecology, Evolution, and Systematics, 29
A. Bailis, R. Rothstein (1990)
A defect in mismatch repair in Saccharomyces cerevisiae stimulates ectopic recombination between homeologous genes by an excision repair dependent process.Genetics, 126 3
R. Scott, M. Spielman, J. Bailey, H. Dickinson (1998)
Parent-of-origin effects on seed development in Arabidopsis thaliana.Development, 125 17
N. Hunter, S. Chambers, E. Louis, R. Borts (1996)
The mismatch repair system contributes to meiotic sterility in an interspecific yeast hybrid.The EMBO Journal, 15
A. Kamm, I. Galasso, Thomas Schmidt, J. Heslop-Harrison (1995)
Analysis of a repetitive DNA family from Arabidopsis arenosa and relationships between Arabidopsis speciesPlant Molecular Biology, 27
L.H. Rieseberg, D.E. Soltis (1989)
Assessing the utility of isozyme number for determining ploidal level: evidence from Helianthus and Heliomeris (Asteraceae)Aliso, 12
R. Clausen, T. Goodspeed (1925)
Interspecific Hybridization in Nicotiana. II. a Tetraploid GLUTINOSA-TABACUM Hybrid, an Experimental Verification of Winge's Hypothesis.Genetics, 10 3
S. Henikoff, L. Comai (1998)
Trans-Sensing Effects: The Ups and Downs of Being TogetherCell, 93
J. Claverys, V. Méjean, A. Gasc, A. Sicard (1983)
Mismatch repair in Streptococcus pneumoniae: relationship between base mismatches and transformation efficiencies.Proceedings of the National Academy of Sciences of the United States of America, 80 19
W. Lammerts (2003)
INTERSPECIFIC HYBRIDIZATION IN NICOTIANA
V. Grant (1956)
Chromosome Repatterning and AdaptationAdvances in Genetics, 8
D.W. Meinke (1994)
Arabidopsis
J. Bradbeer (1979)
Seed developmentNature, 277
R. Flavell (1994)
Inactivation of gene expression in plants as a consequence of specific sequence duplication.Proceedings of the National Academy of Sciences of the United States of America, 91 9
M. Feldman, Bao Liu, G. Segal, S. Abbo, A. Levy, J. Vega (1997)
Rapid elimination of low-copy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomes.Genetics, 147 3
Thomas Wirth, Klaus Gloggler, Thomas Baumruker, Martin Schmidt, Ivan Horak (1983)
Family of middle repetitive DNA sequences in the mouse genome with structural features of solitary retroviral long terminal repeats.Proceedings of the National Academy of Sciences of the United States of America, 80 11
R.W. Allard (1960)
Principles of Plant Breeding
J. Bender, G. Fink (1995)
Epigenetic control of an endogenous gene family is revealed by a novel blue fluorescent mutant of arabidopsisCell, 83
R. Brink, E. Styles, J. Axtell (1996)
Paramutation: Directed Genetic ChangeCold Spring Harbor Monograph Archive, 32
T. Endo (1990)
Gametocidal chromosomes and their induction of chromosome mutations in wheatThe Japanese Journal of Genetics, 65
Roman Volkov, Nikolaj Borisjuk, I. Panchuk, Dieter Schweizer, Vera Hemleben (1999)
Elimination and rearrangement of parental rDNA in the allotetraploid Nicotiana tabacum.Molecular biology and evolution, 16 3
B. McClintock (1965)
Brookhaven National Laboratory Symposia
J. Jeddeloh, J. Bender, E. Richards (1998)
The DNA methylation locus DDM1 is required for maintenance of gene silencing in Arabidopsis.Genes & development, 12 11
G. Hart (1983)
Genetics and evolution of multilocus isozymes in hexaploid wheat.Isozymes, 10
R. Allard, P. García, L. Sáenz-de-Miera, M. Vega (1993)
Evolution of multilocus genetic structure in Avena hirtula and Avena barbata.Genetics, 135 4
J. Mac Key (1958)
Mutagenic response in Triticum at different levels of ploidy
I. Odrzykoski, E. Chudzińska, J. Szweykowski (1996)
The hybrid origin of the polyploid liverwort Pellia borealisGenetica, 98
M. Boisselier‐Dubayle, J. Lambourdière, H. Bischler (1996)
Progeny analysis by isozyme markers in the polyploid liverwort Plagiochasma rupestreBotany, 74
S. Adams, R. Vinkenoog, M. Spielman, H. Dickinson, R. Scott (2000)
Parent-of-origin effects on seed development in Arabidopsis thaliana require DNA methylation.Development, 127 11
Z. Chen, Luca Comai, C. Pikaard, Steven 'kane (1998)
Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids.Proceedings of the National Academy of Sciences of the United States of America, 95 25
G. Moore (1998)
To pair or not to pair: chromosome pairing and evolution.Current opinion in plant biology, 1 2
E. Selva, L. New, G. Crouse, R. Lahue (1995)
Mismatch correction acts as a barrier to homeologous recombination in Saccharomyces cerevisiae.Genetics, 139 3
Elena Mikhailova, T. Naranjo, K. Shepherd, Jannie Eden, C. Heyting, J. Jong (1998)
The effect of the wheat Ph1 locus on chromatin organisation and meiotic chromosome pairing analysed by genome paintingChromosoma, 107
(1927)
Polyploid hybrids of Raphanus sativus × Brassica oleracea L
M. Matzke, O. Scheid, A. Matzke (1999)
Rapid structural and epigenetic changes in polyploid and aneuploid genomesBioEssays, 21
J. Jiricny (1998)
Eukaryotic mismatch repair: an update.Mutation research, 409 3
J. Vega, M. Feldman (1998)
Effect of the pairing gene Ph1 and premeiotic colchicine treatment on intra- and interchromosome pairing of isochromosomes in common wheat.Genetics, 150 3
R. Martienssen (1998)
Transposons, DNA methylation and gene control.Trends in genetics : TIG, 14 7
L. Rieseberg, R. Noyes (1998)
Genetic map-based studies of reticulate evolution in plantsTrends in Plant Science, 3
Xin-ping Zhao, Yang Si, R. Hanson, Charles Crane, H. Price, D. Stelly, Jonathan Wendel, Andrew Paterson (1998)
Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton.Genome research, 8 5
Hart Ge (1983)
Genetics and evolution of multilocus isozymes in hexaploid wheat., 10
T. Bestor (1990)
DNA methylation: evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 326 1235
T.A. Prolla (1998)
DNA mismatch repair and cancerCurr. Opin. Cell Biol., 10
Michael Ronemus, M. Galbiati, Christine Ticknor, Jychian Chen, S. Dellaporta (1996)
Demethylation-Induced Developmental Pleiotropy in ArabidopsisScience, 273
M. Matzke, A. Matzke (1998)
Gene silencing in plants: relevance for genome evolution and the acquisition of genomic methylation patterns.Novartis Foundation symposium, 214
E. Pichersky, D. Soltis, P. Soltis (1990)
Defective chlorophyll a/b-binding protein genes in the genome of a homosporous fern.Proceedings of the National Academy of Sciences of the United States of America, 87 1
W. Marubashi, Tetsuya Yamada, M. Niwa (1999)
Apoptosis detected in hybrids between Nicotiana glutinosa and N. repanda expressing lethalityPlanta, 210
P. Modrich, R. Lahue (1996)
Mismatch repair in replication fidelity, genetic recombination, and cancer biology.Annual review of biochemistry, 65
O. Scheid, L. Jakovleva, K. Afsar, J. Małuszyńska, J. Paszkowski (1996)
A change of ploidy can modify epigenetic silencing.Proceedings of the National Academy of Sciences of the United States of America, 93 14
D. Soltis, P. Soltis (1993)
Molecular data and the dynamic nature of polyploidyCritical Reviews in Plant Sciences, 12
Dr. Ohno (1970)
Evolution by Gene Duplication
(1983)
Mismatch repair inStreptococcus pneumoniae
M. Prudhomme, Vincent Méjean, B. Martin, J. Claverys (1991)
Mismatch repair genes of Streptococcus pneumoniae: HexA confers a mutator phenotype in Escherichia coli by negative complementationJournal of Bacteriology, 173
R. Kolodner, G. Marsischky (1999)
Eukaryotic DNA mismatch repair.Current opinion in genetics & development, 9 1
U. Hanfstingl, A. Berry, Elizabeth Kellogg, James Costa, W. Rüdiger, F. Ausubel (1994)
Haplotypic divergence coupled with lack of diversity at the Arabidopsis thaliana alcohol dehydrogenase locus: roles for both balancing and directional selection?Genetics, 138 3
D. Gerstel (1967)
Phenotypic and Chromosomal Abnormalities Associated with the Introduction of Heterochromatin from NICOTIANA OTOPHORA into N. TABACUM.Genetics, 56 3
C. Pigott (1959)
Genetics and the Origin of SpeciesNature, 184
T. Kakutani, J. Jeddeloh, Susan Flowers, Kyoko Munakata, E. Richards (1996)
Developmental abnormalities and epimutations associated with DNA hypomethylation mutations.Proceedings of the National Academy of Sciences of the United States of America, 93 22
Hong-Guo Yu, E. Hiatt, A. Chan, M. Sweeney, R. Dawe, Kelly Dawe (1997)
Neocentromere-mediated Chromosome Movement in MaizeThe Journal of Cell Biology, 139
J. Jurka (1998)
Repeats in genomic DNA: mining and meaning.Current opinion in structural biology, 8 3
O. Winge
The chromosome. Their numbers and general importance., 13
H. Vaucheret, M. Vincentz, J. Kronenberger, M. Caboche, P. Rouzé (1989)
Molecular cloning and characterisation of the two homeologous genes coding for nitrate reductase in tobaccoMolecular and General Genetics MGG, 216
R. O’Neill, M. O’Neill, J. Graves (1998)
Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybridNature, 393
Chun-xiao Jiang, R. Wright, K. El-Zik, Andrew Paterson (1998)
Polyploid formation created unique avenues for response to selection in Gossypium (cotton).Proceedings of the National Academy of Sciences of the United States of America, 95 8
M. Buuren, J. Neuhaus, H. Shinshi, J. Ryals, F. Meins (1992)
The structure and regulation of homeologous tobacco endochitinase genes of Nicotiana sylvestris and N. tomentosiformis originMolecular and General Genetics MGG, 232
S. Henikoff, Luca Comai (1998)
A DNA methyltransferase homolog with a chromodomain exists in multiple polymorphic forms in Arabidopsis.Genetics, 149 1
V. Grant (1956)
The Genetic Structure of Races and Species in GiliaAdvances in Genetics, 8
Kehr Ae, Smith Hh (1953)
Genetic tumors in nicotiana hybrids., 6
Steven Jacobsen, E. Meyerowitz (1997)
Hypermethylated SUPERMAN epigenetic alleles in arabidopsis.Science, 277 5329
A. Wolffe, M. Matzke (1999)
Epigenetics: regulation through repression.Science, 286 5439
A. Hepburn, L. Clarke, L. Pearson, J. White (1983)
The role of cytosine methylation in the control of nopaline synthase gene expression in a plant tumor.Journal of molecular and applied genetics, 2 3
J. Hollick, J. Dorweiler, V. Chandler (1997)
Paramutation and related allelic interactions.Trends in genetics : TIG, 13 8
L. Steve, B. Schaal, I. Al‐Shehbaz, D. Soltis (1996)
The Origins of Arabidopsis suecica (Brassicaceae) as Indicated by Nuclear rDNA SequencesSystematic Botany, 21
M. Rattazzi, J. Scandalios, G. Whitt (1977)
Isozymes : current topics in biological and medical research
G. Gastony (1991)
Gene silencing in a polyploid homosporous fern: paleopolyploidy revisited.Proceedings of the National Academy of Sciences of the United States of America, 88 5
G. Felsenfeld, J. McGhee (1982)
Methylation and gene controlNature, 296
A. Bhargava, S. Srivastava (2019)
Plant BreedingParticipatory Plant Breeding: Concept and Applications
M. Guo, D. Davis, J. Birchler (1996)
Dosage effects on gene expression in a maize ploidy series.Genetics, 142 4
T. Galitski, A. Saldanha, C. Styles, E. Lander, G. Fink (1999)
Ploidy regulation of gene expression.Science, 285 5425
Odile Humbert, M. Prudhomme, R. Hakenbeck, Christopher Dowson, J. Claverys (1995)
Homeologous recombination and mismatch repair during transformation in Streptococcus pneumoniae: saturation of the Hex mismatch repair system.Proceedings of the National Academy of Sciences of the United States of America, 92 20
E. Sears (1976)
Genetic control of chromosome pairing in wheat.Annual review of genetics, 10
J. Vega, M. Feldman (1998)
Effect of the pairing gene Ph1 on centromere misdivision in common wheat.Genetics, 148 3
M. Matzke, A. Matzke (1998)
Epigenetic silencing of plant transgenes as a consequence of diverse cellular defence responsesCellular and Molecular Life Sciences CMLS, 54
R. Brink, E. Styles, J. Axtell (1968)
Paramutation: directed genetic change. Paramutation occurs in somatic cells and heritably alters the functional state of a locus.Science, 159 3811
M. Matzke, A. Matzke, W. Eggleston (1996)
Paramutation and transgene silencing: a common response to invasive DNA?Trends in Plant Science, 1
(1957)
Spornbildung bei einem Bastard zwischen drei Digitalis-Arten
B. Mcclintock (1984)
The significance of responses of the genome to challenge.Science, 226 4676
J. Gutiérrez, F. Vaquero, F Vences (1994)
Allopolyploid vs. autopolyploid origins in the genus Lathyrus (Leguminosae)1Heredity, 73
Luis Aragón-Alcaide, S. Reader, T. Miller, G. Moore (1997)
Centromeric behaviour in wheat with high and low homoeologous chromosomal pairingChromosoma, 106
P. Peltomäki (2001)
DNA mismatch repair and cancer.Mutation research, 488 1
L. Stadler (1929)
CHROMOSOME NUMBER AND THE MUTATION RATE IN AVENA AND TRITICUM.Proceedings of the National Academy of Sciences of the United States of America, 15 12
R. Small, J. Ryburn, J. Wendel (1999)
Low levels of nucleotide diversity at homoeologous Adh loci in allotetraploid cotton (Gossypium L.).Molecular biology and evolution, 16 4
L. Rieseberg, D. Soltis, Loren Rleseberg
Aliso: a Journal of Systematic and Evolutionary Botany Assessing the Utility of Isozyme Number for Determining Ploidal Level Assessing the Utility of Isozyme Number for Determining Ploidal Level: Evidence from Helianthus and Heliomeris (asteraceae)
Buckler th, Phelps-Durr Tl, Buckler Cs, Dawe Rk, John Doebley, T. Holtsford (1999)
Meiotic drive of chromosomal knobs reshaped the maize genome.Genetics, 153 1
I. Leitch, M. Bennett (1997)
Polyploidy in angiospermsTrends in Plant Science, 2
K. Song, T. Osborn (1994)
A method for examining expression of homologous genes in plant polyploidsPlant Molecular Biology, 26
Allopolyploid plants are hybrids that contain two copies of the genome from each parent. Whereas wild and cultivated allopolyploids are well adapted, man-made allopolyploids are typically unstable, displaying homeotic transformation and lethality as well as chromosomal rearrangements and changes in the number and distribution of repeated DNA sequences within heterochromatin. Large increases in the length of some chromosomes has been documented in allopolyploid hybrids and could be caused by the activation of dormant retrotransposons, as shown to be the case in marsupial hybrids. Synthetic (man-made) allotetraploids of Arabidopsis exhibit rapid changes in gene regulation, including gene silencing. These regulatory abnormalities could derive from ploidy changes and/or incompatible interactions between parental genomes, although comparison of auto- and allopolyploids suggests that intergenomic incompatibilities play the major role. Models to explain intergenomic incompatibilities incorporate both genetic and epigenetic mechanisms. In one model, the activation of heterochromatic transposons (McClintock's genomic shock) may lead to widespread perturbation of gene expression, perhaps by a silencing interaction between activated transposons and euchromatic genes. Qualitatively similar responses, of lesser intensity, may occur in intraspecific hybrids. Therefore, insight into genome function gained from the study of allopolyploidy may be applicable to hybrids of any type and may even elucidate positive interactions, such as those responsible for hybrid vigor.
Plant Molecular Biology – Springer Journals
Published: Oct 16, 2004
Read and print from thousands of top scholarly journals.
Already have an account? Log in
Bookmark this article. You can see your Bookmarks on your DeepDyve Library.
To save an article, log in first, or sign up for a DeepDyve account if you don’t already have one.
Copy and paste the desired citation format or use the link below to download a file formatted for EndNote
Access the full text.
Sign up today, get DeepDyve free for 14 days.
All DeepDyve websites use cookies to improve your online experience. They were placed on your computer when you launched this website. You can change your cookie settings through your browser.