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Lionel Verdoucq, J. Morinière, D. Bevan, A. Esen, A. Vasella, B. Henrissat, Mirjam Czjze (2004)
Structural Determinants of Substrate Specificity in Family 1 β-GlucosidasesJournal of Biological Chemistry, 279
M. Malboobi, D. Lefebvre (1997)
A phosphate-starvation inducible β-glucosidase gene (psr3.2) isolated from Arabidopsis thaliana is a member of a distinct subfamily of the BGA familyPlant Molecular Biology, 34
Y. Fujiki, Y. Yoshikawa, Tokuyuki Sato, N. Inada, Masaki Ito, I. Nishida, A. Watanabe (2001)
Dark-inducible genes from Arabidopsis thaliana are associated with leaf senescence and repressed by sugars.Physiologia plantarum, 111 3
B. Henrissat, G. Davies (1997)
Structural and sequence-based classification of glycoside hydrolases.Current opinion in structural biology, 7 5
Didier Callard, M. Axelos, Laurent Mazzolini (1996)
Novel Molecular Markers for Late Phases of the Growth Cycle of Arabidopsis thaliana Cell-Suspension Cultures Are Expressed during Organ Senescence, 112
M. Snyder, M. Gerstein (2003)
Defining Genes in the Genomics EraScience, 300
S. Thayer, E. Conn (1981)
Subcellular Localization of Dhurrin beta-Glucosidase and Hydroxynitrile Lyase in the Mesophyll Cells of Sorghum Leaf Blades.Plant physiology, 67 4
P. Béguin (1990)
Molecular biology of cellulose degradation.Annual review of microbiology, 44
J. Hagemeier, B. Schneider, N. Oldham, K. Hahlbrock (2001)
Accumulation of soluble and wall-bound indolic metabolites in Arabidopsis thaliana leaves infected with virulent or avirulent Pseudomonas syringae pathovar tomato strains.Proceedings of the National Academy of Sciences of the United States of America, 98 2
D. Dharmawardhana, B. Ellis, J. Carlson (1995)
A [beta]-Glucosidase from Lodgepole Pine Xylem Specific for the Lignin Precursor Coniferin, 107
D. Higgins, J. Cregg (1998)
Introduction to Pichia pastoris.Methods in molecular biology, 103
G. Thorlby, E. Veale, K. Butcher, G. Warren (1999)
Map positions of SFR genes in relation to other freezing-related genes of Arabidopsis thaliana.The Plant journal : for cell and molecular biology, 17 4
W. Hösel, A. Nahrstedt (1975)
Spezifische Glucosidasen fuer das Cyanoglucosid Triglochinin: Reinigung und Charakterisierung von b-Glucosidasen aus Alocasia macrorrhiza Schott. Hoppe-Seyler's ZPhysiol. Chem., 356
J. Xue, L. Rask (1995)
The unusual 5′ splicing border GC is used in myrosinase genes of the BrassicaceaePlant Molecular Biology, 29
F. Bohlmann, C. Zdero (1980)
Neue obliquin-derivate aus Helichrysum serpyllifolium☆Phytochemistry, 19
D. R. Higgins, J. M. Cregg (1999)
Pichia Protocols, Methods in Molecular Biology
A. Esen, D. A. Stetler (1993)
Subcellular localization of maize b-glucosidaseMaize Genet. Coop. News Lett., 67
(1999)
Carbohydrate-Active Enzymes server at URL: http://afmb.cnrs-mrs.fr/ cazy/ CAZY/index.html
(2002)
b-Mannosidase (EC 3.2.1.25) activity during and following germination of tomato
M. Veit, G. Pauli (1999)
Major flavonoids from Arabidopsis thaliana leaves.Journal of natural products, 62 9
R. Matsushima, M. Kondo, M. Nishimura, I. Hara-Nishimura (2003)
A novel ER-derived compartment, the ER body, selectively accumulates a beta-glucosidase with an ER-retention signal in Arabidopsis.The Plant journal : for cell and molecular biology, 33 3
A. Nisius (1988)
The stromacentre inAvena plastids: an aggregation ofβ-glucosidase responsible for the activation of oat-leaf saponinsPlanta, 173
Satoko Yoshida, Masaki Ito, Ikuo Nishida, Akira Watanabe (2001)
Isolation and RNA gel blot analysis of genes that could serve as potential molecular markers for leaf senescence in Arabidopsis thaliana.Plant & cell physiology, 42 2
R. Leah, J. Kigel, I. Svendsen, J. Mundy (1995)
Biochemical and Molecular Characterization of a Barley Seed β-Glucosidase (*)The Journal of Biological Chemistry, 270
(1997)
Genomic sequence for a linamarase gene from cassava (Manihot esculenta Crantz) (GenBank Accession No
T. Fowler (1993)
b-Glucosidases: Biochemistry and Molecular Biology
A. Meijer, R. Kam, Q. Ling, J. Hoge (1998)
Osjab (Accession No. AF072849): a rice homolog of the human AB1transcriptional coactivator (PGR98-149).Plant Physiology, 117
R. Bailey, E. Bourne (1960)
Colour reactions given by sugars and diphenylamine-aniline spray reagents on paper chromatogramsJournal of Chromatography A, 4
Jiaming Zhang, B. Pontoppidan, J. Xue, L. Rask, J. Meijer (2002)
The third myrosinase gene TGG3 in Arabidopsis thaliana is a pseudogene specifically expressed in stamen and petal.Physiologia plantarum, 115 1
S. Bloor, S. Abrahams (2002)
The structure of the major anthocyanin in Arabidopsis thaliana.Phytochemistry, 59 3
H. Stotz, B. Pittendrigh, J. Kroymann, Kerstin Weniger, Jacqueline Fritsche, Antje Bauke, T. Mitchell-Olds (2000)
Induced plant defense responses against chewing insects. Ethylene signaling reduces resistance of Arabidopsis against Egyptian cotton worm but not diamondback moth.Plant physiology, 124 3
R. Zhong, Z. Ye (2003)
The SAC Domain-Containing Protein Gene Family in Arabidopsis1Plant Physiology, 132
G. Babcock, A. Esen (1994)
Substrate specificity of maize β-glucosidasePlant Science, 101
J. E. Poulton (1990)
Cyanogenesis in plantsPlant Physiol., 94
Jiming Zhou, S. Hartmann, Brianne Shepherd, J. Poulton (2002)
Investigation of the Microheterogeneity and Aglycone Specificity-Conferring Residues of Black Cherry Prunasin Hydrolases1Plant Physiology, 129
I. Siegień (1908)
Cyanogenesis in PlantsBotanical Gazette, 45
K. Maleck, Aaron Levine, T. Eulgem, A. Morgan, J. Schmid, K. Lawton, J. Dangl, R. Dietrich (2000)
The transcriptome of Arabidopsis thaliana during systemic acquired resistanceNature Genetics, 26
The Initiative (2000)
Analysis of the genome sequence of the flowering plant Arabidopsis thalianaNature, 408
M. Handford, T. Baldwin, F. Goubet, T. Prime, J. Miles, Xiaolan Yu, P. Dupree (2003)
Localisation and characterisation of cell wall mannan polysaccharides in Arabidopsis thalianaPlanta, 218
G. Blanc, K. Hokamp, K. Wolfe (2003)
A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome.Genome research, 13 2
J. Cregg, T. Vedvick, W. Raschke (1993)
Recent Advances in the Expression of Foreign Genes in Pichia pastorisBio/Technology, 11
W. Hösel, Reinhard Todenhagen (1980)
Characterization of a β-glucosidase from Glycine max which hydrolyses coniferin and syringinPhytochemistry, 19
R. Matsushima, Y. Hayashi, Kenji Yamada, T. Shimada, M. Nishimura, I. Hara-Nishimura (2003)
The ER body, a novel endoplasmic reticulum-derived structure in Arabidopsis.Plant & cell physiology, 44 7
D. Dharmawardhana, B. Ellis, J. Carlson (1999)
cDNA cloning and heterologous expression of coniferin β-glucosidasePlant Molecular Biology, 40
B. Haas, N. Volfovsky, C. Town, Maxim Troukhan, N. Alexandrov, K. Feldmann, R. Flavell, O. White, S. Salzberg (2002)
Full-length messenger RNA sequences greatly improve genome annotationGenome Biology, 3
T. Barrett, C. Suresh, SP Tolley, EJ Dodson, M. Hughes (1995)
The crystal structure of a cyanogenic beta-glucosidase from white clover, a family 1 glycosyl hydrolase.Structure, 3 9
N. Agerbirk, B. Petersen, C. Olsen, B. Halkier, J. Nielsen (2001)
1,4-Dimethoxyglucobrassicin in Barbarea and 4-hydroxyglucobrassicin in Arabidopsis and Brassica.Journal of agricultural and food chemistry, 49 3
N. Terryn, Raimundo Villarroel-Mandiola, P. Neyt, R. Clercq, Wilson Diaz, A. Keyser, H. Daele, P. Rouzé, J. Gielen, M. Montagu (1996)
Nucleotide sequence of the Arabidopsis thaliana gene encoding the G-box-binding factor 1 (GBF1) (Accession number X99941).Plant Physiology, 112
(1996)
Identification and nucleotide sequences of cDNA clones of phosphate-starvation inducible beta-glucosidase genes of Brassicaceae (Accession nos
J. Xue, Mette Jørgensen, U. Pihlgren, L. Rask (1995)
The myrosinase gene family in Arabidopsis thaliana: gene organization, expression and evolutionPlant Molecular Biology, 27
A. Raychaudhuri, P. Tipton (2002)
Cloning and Expression of the Gene for Soybean Hydroxyisourate Hydrolase. Localization and Implications for Function and Mechanism1Plant Physiology, 130
W. Burmeister, S. Cottaz, H. Driguez, R. Iori, S. Palmieri, B. Henrissat (1997)
The crystal structures of Sinapis alba myrosinase and a covalent glycosyl-enzyme intermediate provide insights into the substrate recognition and active-site machinery of an S-glycosidase.Structure, 5 5
T. Fowler (1993)
Deletion of theTrichoderma reeseiβ-Glucosidase Gene,bgl1
(1996)
Zea mays beta-D-glucosidase (glu1) gene (GenBank Accession No
Kentaro Inoue, Y. Ebizuka (1996)
Purification and Characterization of a β-Glucosidase which Converts Furostanol Glycosides to Spirostanol Glycosides from Costus speciosusAdvances in Experimental Medicine and Biology, 404
Lionel Verdoucq, J. Morinière, D. Bevan, A. Esen, A. Vasella, B. Henrissat, Mirjam Czjze (2004)
Structural determinants of substrate specificity in family 1 beta-glucosidases: novel insights from the crystal structure of sorghum dhurrinase-1, a plant beta-glucosidase with strict specificity, in complex with its natural substrate.The Journal of biological chemistry, 279 30
M. Burset, I. Seledtsov, V. Solovyev (2000)
Analysis of canonical and non-canonical splice sites in mammalian genomes.Nucleic acids research, 28 21
W. Hösel, W. Barz (1975)
β‐Glucosidases from Cicer arietinum L.FEBS Journal, 57
Jeanette Nikus, A. Esen, L. Jonsson (2003)
Cloning of a plastidic rye (Secale cereale) β‐glucosidase cDNA and its expression in Escherichia coliPhysiologia Plantarum, 118
Eng‐Kiat Lim, C. Doucet, Yi Li, L. Elias, D. Worrall, Steven Spencer, Joe Ross, D. Bowles (2002)
The Activity of ArabidopsisGlycosyltransferases toward Salicylic Acid, 4-Hydroxybenzoic Acid, and Other Benzoates*The Journal of Biological Chemistry, 277
T. Vision, D. Brown, S. Tanksley (2000)
The origins of genomic duplications in Arabidopsis.Science, 290 5499
L. Rask, E. Andreasson, B. Ekbom, S. Eriksson, B. Pontoppidan, J. Meijer (2004)
Myrosinase: gene family evolution and herbivore defense in BrassicaceaePlant Molecular Biology, 42
M. Reichelt, P. Brown, B. Schneider, N. Oldham, E. Stauber, J. Tokuhisa, D. Kliebenstein, T. Mitchell-Olds, J. Gershenzon (2002)
Benzoic acid glucosinolate esters and other glucosinolates from Arabidopsis thaliana.Phytochemistry, 59 6
D. P. Dharmawardhana, B. E. Ellis, J. E. Carlson (1995)
A b-glucosidase from lodgepole pine specific for the lignin precursor coniferinPlant Physiol., 107
M. A. Malboobi, L. Tremblay, D. D. Lefebvre (1996)
Identification and nucleotide sequences of cDNA clones of phosphate-starvation inducible beta-glucosidase genes of Brassicaceae (Accession nos. U72153 and U72154; Plant Gene Register PGR96-114)Plant Physiol., 112
W. Hösel, Ingrid Tober, S. Eklund, E. Conn (1987)
Characterization of beta-glucosidases with high specificity for the cyanogenic glucoside dhurrin in Sorghum bicolor (L.) moench seedlings.Archives of biochemistry and biophysics, 252 1
B. Henrissat (1991)
A classification of glycosyl hydrolases based on amino acid sequence similarities.The Biochemical journal, 280 ( Pt 2)
M. Czjzek, M. Cicek, V. Zamboni, D. Bevan, B. Henrissat, A. Esen (2000)
The mechanism of substrate (aglycone) specificity in beta -glucosidases is revealed by crystal structures of mutant maize beta -glucosidase-DIMBOA, -DIMBOAGlc, and -dhurrin complexes.Proceedings of the National Academy of Sciences of the United States of America, 97 25
C. Simillion, K. Vandepoele, M. Montagu, M. Zabeau, Y. Peer (2002)
The hidden duplication past of Arabidopsis thalianaProceedings of the National Academy of Sciences of the United States of America, 99
B. L. Møller, J. E. Poulton (1993)
Methods in Plant Biochemistry
A. Raychaudhuri, P. Tipton (2003)
A familiar motif in a new context: the catalytic mechanism of hydroxyisourate hydrolase.Biochemistry, 42 22
K. Gallardo, C. Job, S. Groot, M. Puype, H. Demol, J. Vandekerckhove, Dominique Job (2001)
Proteomic analysis of arabidopsis seed germination and priming.Plant physiology, 126 2
H. Niemeyer (1988)
Hydroxamic acids (4-hydroxy-1,4-benzoxazin-3-ones), defence chemicals in the GramineaePhytochemistry, 27
J. Berrin, J. Berrin, M. Czjzek, P. Kroon, W. McLauchlan, A. Puigserver, G. Williamson, N. Juge, N. Juge (2003)
Substrate (aglycone) specificity of human cytosolic beta-glucosidase.The Biochemical journal, 373 Pt 1
(1995)
A root specific myrosinase in Arabidopsis responding to cyst nematode infection (direct sequence submission to GenBank)
E. Conn (1993)
β-Glycosidases in Plants: Substrate Specificity
Stephen Mount (1982)
A catalogue of splice junction sequences.Nucleic acids research, 10 2
(1998)
Arabidopsis thaliana beta - glucosidase ( GLUC ) mRNA , complete cds ( direct sequence submission to GenBank )
P. Rubinelli, Yi Hu, Hong Ma (1998)
Identification, sequence analysis and expression studies of novel anther-specific genes of Arabidopsis thalianaPlant Molecular Biology, 37
Beixin Mo, Derek Bewley (2002)
β-Mannosidase (EC 3.2.1.25) activity during and following germination of tomato (Lycopersicon esculentum Mill.) seeds. Purification, cloning and characterizationPlanta, 215
L. Hogge, D. Reed, E. Underhill, G. Haughn (1988)
HPLC Separation of Glucosinolates from Leaves and Seeds of Arabidopsis thaliana and Their Identification Using Thermospray Liquid Chramatography/Mass SpectrometryJournal of Chromatographic Science, 26
W. Hösel, A. Nahrstedt (1975)
Spezifische Glucosidasen für das Cyanglucosid Triglochinin. Reinigung und Charakterisierung vonβ-Glucosidasen aus Alocasia macrorrhiza SchottBiological Chemistry, 356
Inke Nitz, Heike Berkefeld, P. Puzio, F. Grundler (2001)
Pyk10, a seedling and root specific gene and promoter from Arabidopsis thaliana.Plant science : an international journal of experimental plant biology, 161 2
F. Härtel, A. Brandt (2002)
Characterization of a Brassica napus myrosinase expressed and secreted by Pichia pastoris.Protein expression and purification, 24 2
(1998)
A genomic cyanogenic beta - glucosidase gene from Cassava ( Accession No . X 94986 )
J. Felsenstein (1985)
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAPEvolution, 39
Joe Ross, Yi Li, Eng‐Kiat Lim, D. Bowles (2001)
Higher plant glycosyltransferasesGenome Biology, 2
Kentaro Inoue, M. Shibuya, Kazuo Yamamoto, Y. Ebizuka (1996)
Molecular cloning and bacterial expression of a cDNA encoding furostanol glycoside 26‐O‐β‐glucosidase of Costus speciosusFEBS Letters, 389
A. Falk, L. Rask (1995)
Expression of a Zeatin-O-Glucoside-Degrading [beta]-Glucosidase in Brassica napus, 108
K. Ryan, E. Swinny, C. Winefield, K. Markham (2001)
Flavonoids and UV Photoprotection in Arabidopsis MutantsZeitschrift für Naturforschung C, 56
E. Andreasson, L. Jørgensen, A. Höglund, L. Rask, J. Meijer (2001)
Different myrosinase and idioblast distribution in Arabidopsis and Brassica napus.Plant physiology, 127 4
S. Altschul, Thomas Madden, A. Schäffer, Jinghui Zhang, Zheng Zhang, W. Miller, D. Lipman (1997)
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.Nucleic acids research, 25 17
P. Sharp (1981)
Speculations on RNA splicingCell, 23
John Brown, C. Simpson (1998)
SPLICE SITE SELECTION IN PLANT PRE-mRNA SPLICING.Annual review of plant physiology and plant molecular biology, 49
(1975)
b - Glucosidases from Cicer arietinum L . Purification and properties of isoflavone - 7 - O - glucoside - specific b - glucosidases
S. Chivasa, B. Ndimba, W. Simon, D. Robertson, Xiao‐Lan Yu, J. Knox, P. Bolwell, A. Slabas (2002)
Proteomic analysis of the Arabidopsis thaliana cell wallELECTROPHORESIS, 23
U. Laemmli (1970)
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4Nature, 227
Eng‐Kiat Lim, Yi Li, A. Parr, R. Jackson, D. Ashford, D. Bowles (2001)
Identification of Glucosyltransferase Genes Involved in Sinapate Metabolism and Lignin Synthesis in Arabidopsis *The Journal of Biological Chemistry, 276
Jane Koukol, P. Miljanich, Eric Conn (1961)
The metabolism of aromatic compounds in higher plants. III. The beta-glucosides of o-coumaric, coumarinic, and melilotic acids.The Journal of biological chemistry, 236
In plants, Glycoside Hydrolase (GH) Family 1 β-glycosidases are believed to play important roles in many diverse processes including chemical defense against herbivory, lignification, hydrolysis of cell wall-derived oligosaccharides during germination, and control of active phytohormone levels. Completion of the Arabidopsis thalianagenome sequencing project has enabled us, for the first time, to determine the total number of Family 1 members in a higher plant. Reiterative database searches revealed a multigene family of 48 members that includes eight probable pseudogenes. Manual reannotation and analysis of the entire family were undertaken to rectify existing misannotations and identify phylogenetic relationships among family members. Forty-seven members (designated BGLU1 through BGLU47) share a common evolutionary origin and were subdivided into approximately 10 subfamilies based on phylogenetic analysis and consideration of intron–exon organizations. The forty-eighth member of this family (At3g06510; sfr2) is a β-glucosidase-like gene that belongs to a distinct lineage. Information pertaining to expression patterns and potential functions of Arabidopsis GH Family 1 members is presented. To determine the biological function of all family members, we intend to investigate the substrate specificity of each mature hydrolase after its heterologous expression in the Pichia pastoris expression system. To test the validity of this approach, the BGLU44-encoded hydrolase was expressed in P. pastoris and purified to homogeneity. When tested against a wide range of natural and synthetic substrates, this enzyme showed a preference for β-mannosides including 1,4-β-D-mannooligosaccharides, suggesting that it may be involved in A. thaliana in degradation of mannans, galactomannans, or glucogalactomannans. Supporting this notion, BGLU44 shared high sequence identity and similar gene organization with tomato endosperm β-mannosidase and barley seed β-glucosidase/β-mannosidase BGQ60.
Plant Molecular Biology – Springer Journals
Published: Dec 30, 2004
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