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Complete nucleotide sequence and genome organization of peach virus D, a putative new member of the genus Marafivirus

Complete nucleotide sequence and genome organization of peach virus D, a putative new member of... The complete nucleotide sequence of peach virus D (PeVD) from Prunus persica was determined. The PeVD genome consists of 6,612 nucleotides excluding the 3’ poly(A) tail and contains a single open reading frame coding for a polyprotein of 227 kDa. Sequence comparisons and phylogenetic analysis revealed that PeVD is most closely related to viruses in the genus Marafivirus, family Tymoviridae. The complete nucleotide and CP amino acid sequences of PeVD were most similar (51.1–57.8% and 32.2–48.0%, respectively) to members of the genus Marafivirus, suggesting that PeVD is a new member of this genus. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Archives of Virology Springer Journals

Complete nucleotide sequence and genome organization of peach virus D, a putative new member of the genus Marafivirus

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References (13)

Publisher
Springer Journals
Copyright
Copyright © Springer-Verlag Wien 2017
Subject
Biomedicine; Virology; Medical Microbiology; Infectious Diseases
ISSN
0304-8608
eISSN
1432-8798
DOI
10.1007/s00705-017-3255-y
pmid
28188372
Publisher site
See Article on Publisher Site

Abstract

The complete nucleotide sequence of peach virus D (PeVD) from Prunus persica was determined. The PeVD genome consists of 6,612 nucleotides excluding the 3’ poly(A) tail and contains a single open reading frame coding for a polyprotein of 227 kDa. Sequence comparisons and phylogenetic analysis revealed that PeVD is most closely related to viruses in the genus Marafivirus, family Tymoviridae. The complete nucleotide and CP amino acid sequences of PeVD were most similar (51.1–57.8% and 32.2–48.0%, respectively) to members of the genus Marafivirus, suggesting that PeVD is a new member of this genus.

Journal

Archives of VirologySpringer Journals

Published: Jun 1, 2017

Keywords: Complete Nucleotide Sequence; Ringspot Virus; Apple Chlorotic Leaf Spot Virus; Turnip Yellow Mosaic Virus; Prune Dwarf Virus

There are no references for this article.