Complete genomic sequence of barley ( Hordeum vulgare ) endornavirus (HvEV) determined by next-generation sequencing

Complete genomic sequence of barley ( Hordeum vulgare ) endornavirus (HvEV) determined by... Endornaviruses are unusual plant-, fungus- and oomycete-infecting viruses with a large, ca 14- to 17-kb linear double-stranded RNA (dsRNA) genome and a persistent lifestyle. The complete genome sequence of an endornavirus from the barley ( Hordeum vulgare ) Nerz variety was determined from paired Illumina MySeq reads derived from purified dsRNAs. The genome is 14,243 nt long, with 5’ and 3’ non-coding regions of 207 and 47 nt, respectively. It encodes a single large protein of 4663 amino acids that carries conserved motifs for a methyltransferase, a helicase and an RNA-dependent RNA polymerase. The sequence of Hordeum vulgare endornavirus (HvEV) carries all the hallmarks of a typical member of the genus Endornavirus , with the exception of an UDP-glycosyltransferase motif observed in many, but not all, endornaviral genomes. Archives of Virology Springer Journals

Complete genomic sequence of barley ( Hordeum vulgare ) endornavirus (HvEV) determined by next-generation sequencing

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Springer Vienna
Copyright © 2016 by Springer-Verlag Wien
Biomedicine; Virology; Medical Microbiology; Infectious Diseases
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