Complete genome sequence of pepper yellow mosaic virus, a potyvirus, occurring in Brazil

Complete genome sequence of pepper yellow mosaic virus, a potyvirus, occurring in Brazil The complete genomic sequence of pepper yellow mosaic virus (PepYMV), a member of the genus Potyvirus , was determined. The sequence was 9745 nucleotides long, excluding the 3′ poly(A) tail. The genome contained a large open reading frame encoding a polyprotein of 3085 amino acids, which contained the typically conserved motifs found in members of the genus Potyvirus and an additional P3-PIPO (pretty interesting potyvirus ORF). In a pairwise comparison with other potyvirus sequences, the full genome of PepYMV shared a maximum of 63.84 % nucleotide sequence identity with pepper mottle virus (PepMoV), followed by verbena virus Y (VVY, 62.11 %), potato virus Y (PVY, 62.07 %) and Peru tomato mosaic virus (PTV, 62.00 %). Based upon a phylogenetic analysis, PepYMV was most closely related to PepMoV and PTV, within the PVY subgroup cluster, like most potyviruses isolated in solanaceous hosts in South America. Archives of Virology Springer Journals

Complete genome sequence of pepper yellow mosaic virus, a potyvirus, occurring in Brazil

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Springer Vienna
Copyright © 2012 by Springer-Verlag
Biomedicine; Infectious Diseases; Medical Microbiology; Virology
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