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A. Geering, L. McMichael, R. Dietzgen, John Thomas (2000)
Genetic diversity among banana streak virus isolates from Australia (vol 90, pg 921, 2000)Phytopathology, 90
Christophe Mindzié, H. Doutrelepont, L. Vrydaghs, R. Swennen, R. Swennen, H. Beeckman, E. Langhe, P. Maret (2001)
First archaeological evidence of banana cultivation in central Africa during the third millennium before presentVegetation History and Archaeobotany, 10
J. Kubiriba, J. Legg, W. Tushemereirwe, E. Adipala (2001)
Vector transmission of Banana streak virus in the screenhouse in UgandaAnnals of Applied Biology, 139
A. Geering, L. McMichael, R. Dietzgen, J. Thomas (2000)
Genetic Diversity Among Banana streak virus Isolates from Australia.Phytopathology, 90 8
S. Phillips, R. Briddon, A. Brunt, R. Hull (1999)
The Partial Characterization of a Badnavirus Infecting the Greater Asiatic or Water Yam (Dioscorea alata)Journal of Phytopathology, 147
Y. Xiong, T. Eickbush (1990)
Origin and evolution of retroelements based upon their reverse transcriptase sequences.The EMBO Journal, 9
(1971)
Viruses affecting cacao
A. Bhat, S. Devasahayam, Y. Sarma, R. Pant (2003)
Association of a badnavirus in black pepper (Piper nigrum L.) transmitted by mealybug (Ferrisia virgata) in IndiaCurrent Science, 84
D. Silva, P. Jones, M. Shaw (2002)
Identification and transmission of Piper yellow mottle virus and Cucumber mosaic virus infecting black pepper (Piper nigrum) in Sri LankaPlant Pathology, 51
R. Geijskes, K. Braithwaite, J. Dale, R. Harding, G. Smith (2002)
Sequence analysis of an Australian isolate of sugarcane bacilliform badnavirusArchives of Virology, 147
G. Harper, D. Hart, S. Moult, R. Hull (2002)
Detection of banana streak virus in field samples of bananas from Uganda.Annals of Applied Biology, 141
Lynda Hagen, M. Jacquemond, A. Lépingle, Hervé Lot, M. Tepfer (1993)
Nucleotide sequence and genomic organization of cacao swollen shoot virus.Virology, 196 2
B. Lockhart (1986)
Purification and serology of a bacilliform virus associated with banana streak diseasePhytopathology, 76
(1993)
Serological and genomic heterogeneity of banana streak badnavirus : implications for virus detection in Musa germplasm
R. Briddon, S. Phillips, A. Brunt, R. Hull (2004)
Analysis of the Sequence of Dioscorea Alata Bacilliform Virus; Comparison to other Members of the Badnavirus GroupVirus Genes, 18
I. Yang, G. Hafner, J. Dale, R. Harding (2003)
Genomic characterisation of taro bacilliform virusArchives of Virology, 148
A. Brunt, G. Foster (1999)
Virus Taxonomy. Seventh Report of the International Committee on Taxomony of Viruses
G. Harper, J. Osuji, J. Heslop-Harrison, R. Hull (1999)
Integration of banana streak badnavirus into the Musa genome: molecular and cytogenetic evidence.Virology, 255 2
Susannah Gal, B. Pisan, Thomas Hohn, Nigel Grimsley, Barbara Hohn (1992)
Agroinfection of transgenic plants leads to viable cauliflower mosaic virus by intermolecular recombination.Virology, 187 2
N. Suzuki (2000)
Virus Taxonomy : Seventh Report of the International Committee for the Taxonomy of Viruses.(共著)
(1996)
Banana streak virus and an unidentified filamentous virus disease complex of Highland bananas in Uganda
David Schoenbrun (1993)
Cattle herds and banana gardens: the historical geography of the western Great Lakes region,ca AD 800–1500African Archaeological Review, 11
S. Medberry, B. Lockhart, N. Olszewski (1990)
Properties of Commelina yellow mottle virus's complete DNA sequence, genomic discontinuities and transcript suggest that it is a pararetrovirus.Nucleic acids research, 18 18
N. Nath, S. Mathur, I. Dasgupta (2002)
Molecular analysis of two complete rice tungro bacilliform virus genomic sequences from IndiaArchives of Virology, 147
A. Jones, W. McGavin, A. Geering, B. Lockhart (2001)
A New Badnavirus in Ribes Species, its Detection by PCR, and its Close Association with Gooseberry Vein Banding Disease.Plant disease, 85 4
Is banana streak virus strain OL the only activatable virus integrant in the Musa genome ? Proc , Second International Conference on Molec Cellular Biol of Banana
Q. Huang, J. Hartung (2001)
Cloning and sequence analysis of an infectious clone of Citrus yellow mosaic virus that can infect sweet orange via Agrobacterium-mediated inoculation.The Journal of general virology, 82 Pt 10
R. Hull, J. Sadler, M. Longstaff (1986)
The sequence of carnation etched ring virus DNA: comparison with cauliflower mosaic virus and retrovirusesThe EMBO Journal, 5
G. Harper, R. Hull (2004)
Cloning and Sequence Analysis of Banana Streak Virus DNAVirus Genes, 17
J. Thompson, T. Gibson, F. Plewniak, F. Jeanmougin, D. Higgins (1997)
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.Nucleic acids research, 25 24
(1996)
onwards) Plant viruses online: Descriptions and lists from the VIDE database
M. Bouhida, B. Lockhart, N. Olszewski (1993)
An analysis of the complete sequence of a sugarcane bacilliform virus genome infectious to banana and rice.The Journal of general virology, 74 ( Pt 1)
M. Cummings (2004)
MEGA (Molecular Evolutionary Genetics Analysis)Dictionary of Bioinformatics and Computational Biology
M. Nei, T. Gojobori (1986)
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.Molecular biology and evolution, 3 5
C. Fauquet, J. Stanley (2003)
Geminivirus classification and nomenclature: progress and problemsAnnals of Applied Biology, 142
T. Ndowora, Ganesh Dahal, Daryle Lafleur, G. Harper, R. Hull, N. Olszewski, B. Lockhart (1999)
Evidence that badnavirus infection in Musa can originate from integrated pararetroviral sequences.Virology, 255 2
A. Geering, N. Olszewski, Ganesh Dahal, John Thomas, B. Lockhart (2001)
Analysis of the distribution and structure of integrated Banana streak virus DNA in a range of Musa cultivars.Molecular plant pathology, 2 4
Ilin Yang, G. Hafner, Peter Revill, James Dale, Robert Harding (2003)
Sequence diversity of South Pacific isolates of Taro bacilliform virus and the development of a PCR-based diagnostic testArchives of Virology, 148
MJ Gonzales, J Dugan, RW Shafer (2002)
Synonymous and nonsynonymous mutation rates in sequences with allelic mixtures.BioInformatics, 18
J. Schoelz, W. Wintermantel (1993)
Expansion of Viral Host Range through Complementation and Recombination in Transgenic Plants.The Plant cell, 5
B. Lockhart, L. Autrey (1988)
Occurrence in sugarcane of a bacilliform virus related serologically to banana streak virusPlant Disease, 72
O. Azzam, M. Arboleda, K. Umadhay, J. Reyes, F. Cruz, A. Mackenzie, K. McNally (2000)
Genetic composition and complexity of virus populations at tungro-endemic and outbreak rice sitesArchives of Virology, 145
M. Gonzales, Jonathan Dugan, R. Shafer (2002)
Synonymous-non-synonymous mutation rates between sequences containing ambiguous nucleotides (Syn-SCAN)Bioinformatics, 18 6
A. Geering, N. Olszewski, G. Harper, B. Lockhart, R. Hull, John Thomas (2005)
Banana contains a diverse array of endogenous badnaviruses.The Journal of general virology, 86 Pt 2
Sudhir Kumar, K. Tamura, I. Jakobsen, M. Nei (2001)
MEGA2: molecular evolutionary genetics analysis softwareBioinformatics, 17 12
(1970)
Pest and diseases of tropical crops and their control
G. Harper, G. Dahal, G. Thottappilly, R. Hull (1999)
Detection of episomal banana streak badnavirus by IC-PCR.Journal of virological methods, 79 1
K. Hoffmann, S. Sackey, E. Maiss, D. Adomako, H. Vetten (1997)
Immunocapture Polymerase Chain Reaction for the Detection and Characterization of Cacao Swollen Shoot Virus 1 A IsolatesJournal of Phytopathology, 145
J. Hay, Matthew Jones, Maggi Blakebrough, Indranil Dasgupta, Jeffrey Davies, Roger Hull (1991)
An analysis of the sequence of an infectious clone of rice tungro bacilliform virus, a plant pararetrovirus.Nucleic acids research, 19 10
In a study of the variation among isolates of Banana streak virus (BSV) in Uganda, 140 sequences were obtained from 49 samples by PCR across the conserved reverse transcriptase/RNaseH region of the genome. Pairwise comparison of these sequences suggested that they represented 15 different species and phylogenetic analyses showed that all species fell into three major clades based on 28% sequence difference. In addition to the Ugandan sequences, clade I also contained BSV species that are known as both integrated sequences and episomal viruses; clade II also contained integrated BSV sequences but which have not previously been identified as episomal viruses. Clade III comprised of Sugarcane bacilliform virus isolates and Ugandan BSV sequences and for which there is no evidence of integration. The possible reasons for the extraordinary levels of virus sequence variation and the potential origins and epidemiology of these viruses causing banana streak disease are discussed.
Archives of Virology – Springer Journals
Published: Dec 1, 2005
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