Current state of the genetic polymorphism in spring barley (Hordeum vulgare L.) from Russia assessed by the alleles of hordein-coding loci

Current state of the genetic polymorphism in spring barley (Hordeum vulgare L.) from Russia... Starch gel electrophoresis was performed to study the polymorphism of hordeins encoded by the Hrd A, Hrd B, and Hrd F loci in 211 varieties of spring barley. For 41 of these varieties, the genetic formulas were established for the first time. In the two samples of varieties, the comparative analysis of allelic diversity and allele frequencies of hordein-coding loci was carried out. The first sample consisted of 101 spring barley varieties approved for the use on the territory of the Russian Federation in 1999, while the second sample included 160 spring barley varieties that were approved in 2014; 49 of these varieties were common for both samples. It is demonstrated that the current tendency to reduction of the proportion of heterogeneous spring barley varieties is mainly due to the introduction of foreign varieties homogeneous for the hordein-coding loci. At the same time, there is an increase in polymorphism of hordein-coding loci in modern spring barley varieties. The number of alleles for the Hrd A locus increased by five alleles, and for the Hrd B locus, by nine alleles. Along with the alleles recorded earlier in barley landrace populations and varieties bred in 20th century, three novel alleles of the Hrd A locus and four alleles of the Hrd B locus were identified. The number of alleles of the Hrd F locus remained unchanged (four), and the changes in their frequencies were small. At the same time, the changes in frequency observed for some alleles of the Hrd A and Hrd B loci were statistically significant. All newly identified alleles of hordein-coding loci were found with low frequencies (from 0.003 to 0.006), so despite the increased number of alleles, no statistically significant increase in genetic diversity in terms of μ and PIC indices was observed. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Russian Journal of Genetics Springer Journals

Current state of the genetic polymorphism in spring barley (Hordeum vulgare L.) from Russia assessed by the alleles of hordein-coding loci

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Publisher
Springer Journals
Copyright
Copyright © 2016 by Pleiades Publishing, Inc.
Subject
Biomedicine; Human Genetics; Animal Genetics and Genomics; Microbial Genetics and Genomics
ISSN
1022-7954
eISSN
1608-3369
DOI
10.1134/S1022795416060077
Publisher site
See Article on Publisher Site

Abstract

Starch gel electrophoresis was performed to study the polymorphism of hordeins encoded by the Hrd A, Hrd B, and Hrd F loci in 211 varieties of spring barley. For 41 of these varieties, the genetic formulas were established for the first time. In the two samples of varieties, the comparative analysis of allelic diversity and allele frequencies of hordein-coding loci was carried out. The first sample consisted of 101 spring barley varieties approved for the use on the territory of the Russian Federation in 1999, while the second sample included 160 spring barley varieties that were approved in 2014; 49 of these varieties were common for both samples. It is demonstrated that the current tendency to reduction of the proportion of heterogeneous spring barley varieties is mainly due to the introduction of foreign varieties homogeneous for the hordein-coding loci. At the same time, there is an increase in polymorphism of hordein-coding loci in modern spring barley varieties. The number of alleles for the Hrd A locus increased by five alleles, and for the Hrd B locus, by nine alleles. Along with the alleles recorded earlier in barley landrace populations and varieties bred in 20th century, three novel alleles of the Hrd A locus and four alleles of the Hrd B locus were identified. The number of alleles of the Hrd F locus remained unchanged (four), and the changes in their frequencies were small. At the same time, the changes in frequency observed for some alleles of the Hrd A and Hrd B loci were statistically significant. All newly identified alleles of hordein-coding loci were found with low frequencies (from 0.003 to 0.006), so despite the increased number of alleles, no statistically significant increase in genetic diversity in terms of μ and PIC indices was observed.

Journal

Russian Journal of Genetics – Springer Journals

Published: Jul 13, 2016

References

  • Temporal trends in the diversity of UK wheat
    Donini, P.; Law, J.R.; Koebner, R.M.D.
  • Quantitative evaluation of genetic diversity in wheat germplasm using molecular markers
    Manifesto, M.M.; Schlatter, A.R.; Hopp, H.E.
  • Diversity changes in an intensively bred wheat germplasm during the 20th century
    Christiansen, M.J.; Andersen, S.B.; Ortiz, R.
  • Allelic diversity changes in 96 Canadian oat cultivars released from 1886 to 2001
    Fu, Y.-B.; Peterson, G.W.; Scoles, G.
  • Molecular diversity in French bread wheat accessions related to temporal trends and breeding programs
    Roussel, V.; Koenig, J.; Beckert, M.; Balfourier, F.
  • Genetic variability evaluation in Moroccan collection of barley, Hordeum vulgare L., by means of storage proteins and RAPDs
    Dakir, E.-H.; Ruiz, M.-L.; Garcia, P.; Vega, P.
  • Mapping of Hrd (Hordeum vulgare L. emed. Vav. et Bach.) loci
    Sozinov, A.A.; Netsvetaev, V.P.; Grigoryan, E.M.; Obraztsov, I.S.
  • The genetic analysis of barley storage proteins
    Shewry, P.R.; Faulks, A.J.; Pickering, R.A.
  • The prolamin storage proteins of cereal seeds: structure and evolution
    Shewry, P.R.; Tatham, A.S.
  • Genetic control of the hordein synthesis and its relationship with economic traits in spring barley
    Netsvetaev, V.P.
  • Polimorfizm belkov i ego znachenie v genetike i selektsii
    Sozinov, A.A.
  • Coordinator’s report: chromosome 5
    Jensen, J.
  • Assessment of barley seeds cultivar identity and purity by means of electrophoretic analysis of storage proteins, Metodich. posobie k praktikumu “Belkovye markery dlya geneticheskoi pasportizatsii i uluchsheniya genomov rastenii khozyaistvenno tsennykh vidov”
    Pomortsev, A.A.; Lyalina, E.V.
  • Dinamika populyatsionnykh genofondov pri antropogennykh vozdeistviyakh
    Pomortsev, A.A.; Kalabushkin, B.A.
  • A retrospective analysis of spring barley germplasm development from “foundation genotypes” to currently successful cultivars
    Russell, J.; Ellis, R.; Thomas, W.B.
  • Dynamics of genetic variation at gliadin-coding loci in Saratov cultivars of common wheat Triticum aestivum L. over eight decades of scientific breeding
    Novosel’skaya-Dragovich, A.Yu.; Krupnov, V.A.; Saifulin, R.A.; Pukhal’skii, V.A.
  • Changes in the genetic diversity of barley of Nordic and Baltic origin
    Brantestam, A.K.; Bothmer, R.; Rashal, I.; Weibull, J.
  • The dynamics of the diversity of spring soft wheat in Western and Eastern Siberia at gliadin loci for a century breeding period
    Nikolaev, A.A.
  • Hordein polymorphism of cultivated barley (Hordeum vulgare L.)
    Pomortsev, A.A.; Netsvetaev, V.P.; Sozinov, A.A.
  • Vvedenie v kolichestvennuyu biologiyu
    Ivanter, E.V.; Korosov, A.V.
  • Itogi Nauki Tekh., Ser.: Obshch. Genet.
    Zhivotovskii, L.A.
  • Optimizing parental selection for genetic linkage maps
    Anderson, J.A.; Churchill, G.A.; Autrique, J.E.
  • Primenenie neparametricheskikh kriteriev statistiki v mediko-biologicheskikh issledovaniyakh
    Gubler, E.V.; Genkin, A.A.
  • The use of electrophoretic analysis of resource proteins in laboratory monitoring of grain seeds’ variety testing
    Pomortsev, A.A.; Lyalina, E.V.
  • Handbook of Variety Testing: Electrophoresis Handbook: Variety Identification
    Cook, R.J.
  • The development of the domestic market of spring barley varieties
    Goncharov, S.V.; Mordovin, A.N.
  • The World Wheat Book: A History of Wheat Breeding
    Feldman, M.
  • Genogeography and patterns of distribution of allelic variants in three hordein coding loci of spring barley on the territory of the former Soviet Union
    Pomortsev, A.A.; Kalabushkin, B.A.; Ladogina, M.P.; Blank, M.L.
  • Distribution of the allelic variants of three hordeincoding loci of spring barley in Russia
    Pomortsev, A.A.; Kalabushkin, B.A.; Lyalina, E.V.
  • Genetic diversity in cultivated plants—loss or stability?
    Khlestkina, E.K.; Huang, X.Q.; Quenum, F.J.B.
  • Comparative analysis of the genetic diversity dynamics at gliadin loci in the winter common wheat Triticum aestivum L. cultivars developed in Serbia and Italy over 40 years of scientific breeding
    Novosel’skaya-Dragovich, A.Yu.; Fisenko, A.V.; Imasheva, A.G.; Pukhal’skii, V.A.
  • Genetic diversity trends in twentieth century crop cultivars: a meta analysis
    Wouw, M.; Hintum, T.; Kik, C.

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