Access the full text.
Sign up today, get DeepDyve free for 14 days.
J. Giovannoni (2004)
Genetic Regulation of Fruit Development and RipeningThe Plant Cell Online, 16
D. Cantu, B. Blanco-Ulate, L. Y. Yang (2009)
Ripening-regulated susceptibility of tomato fruit to Botrytis cinerea requires NOR but not RIN or ethylene, 150
(2014)
Genetic regulation and structural changes
Yasuhiro Ito, Ayako Nishizawa-Yokoi, M. Endo, Masafumi Mikami, Y. Shima, N. Nakamura, Eiichi Kotake-Nara, Susumu Kawasaki, S. Toki (2017)
Re-evaluation of the rin mutation and the role of RIN in the induction of tomato ripeningNature Plants, 3
Wen Li, You-ping Xu, Zhixian Zhang, Wen-Yuan Cao, Fei Li, Xue-ping Zhou, Gongyou Chen, Xin-Zhong Cai (2012)
Identification of Genes Required for Nonhost Resistance to Xanthomonas oryzae pv. oryzae Reveals Novel Signaling ComponentsPLoS ONE, 7
J. Ye, Tixu Hu, Congmei Yang, Hanxia Li, Ming-lei Yang, Raina Ijaz, Z. Ye, Yuyang Zhang (2015)
Transcriptome Profiling of Tomato Fruit Development Reveals Transcription Factors Associated with Ascorbic Acid, Carotenoid and Flavonoid BiosynthesisPLoS ONE, 10
Xiaoqi Pan, D. Fu, B. Zhu, Chengwen Lu, Yunbo Luo (2013)
Overexpression of the ethylene response factor SlERF1 gene enhances resistance of tomato fruit to Rhizopus nigricansPostharvest Biology and Technology, 75
J. Giovannoni (2007)
Fruit ripening mutants yield insights into ripening control.Current opinion in plant biology, 10 3
(2009)
during geminivirus infection
M. Quinet, T. Angosto, F. Yuste-Lisbona, R. Blanchard-Gros, Servane Bigot, J. Martínez, S. Lutts (2019)
Tomato Fruit Development and MetabolismFrontiers in Plant Science, 10
(2017)
salicylic acid accumulation
(2008)
DNA-binding specificity, transcriptional activation
K. Otulak-Kozieł, E. Kozieł, J. Bujarski (2018)
Spatiotemporal Changes in Xylan-1/Xyloglucan and Xyloglucan Xyloglucosyl Transferase (XTH-Xet5) as a Step-In of Ultrastructural Cell Wall Remodelling in Potato–Potato Virus Y (PVYNTN) Hypersensitive and Susceptible ReactionInternational Journal of Molecular Sciences, 19
Wenqing Yu, Ruirui Zhao, J. Sheng, Lin Shen (2018)
SlERF2 Is Associated with Methyl Jasmonate-Mediated Defense Response against Botrytis cinerea in Tomato Fruit.Journal of agricultural and food chemistry, 66 38
K. Buxdorf, G. Rubinsky, O. Barda (2014)
The transcription factor SlSHINE3 modulates defense responses in tomato plants, 84
P. Wit, W. Flach (1979)
Differential accumulation of phytoalexins in tomato leaves but not in fruits after inoculation with virulent and avirulent races of Cladosporium fulvumPhysiologial Plant Pathology, 15
Kristen Fortney, M. Kotlyar, I. Jurisica (2010)
Inferring the functions of longevity genes with modular subnetwork biomarkers of Caenorhabditis elegans agingGenome Biology, 11
Lincheng Zhang, Mingku Zhu, Lijun Ren, Anzhou Li, Guoping Chen, Zongli Hu (2018)
The SlFSR gene controls fruit shelf-life in tomatoJournal of Experimental Botany, 69
(2014)
The transcription factor SlSHINE3 modulates
(2002)
biochemistry of fruit ripening, First Edition
Z. Ouyang, Shixia Liu, Lihong Huang, Yongbo Hong, Xiaohui Li, Lei Huang, Yafen Zhang, Huijuan Zhang, Dayong Li, F. Song (2016)
Tomato SlERF.A1, SlERF.B4, SlERF.C3 and SlERF.A3, Members of B3 Group of ERF Family, Are Required for Resistance to Botrytis cinereaFrontiers in Plant Science, 7
E. Miedes, E. Lorences (2009)
Xyloglucan endotransglucosylase/hydrolases (XTHs) during tomato fruit growth and ripening.Journal of plant physiology, 166 5
Junli Huang, Min Gu, Zhibing Lai, B. Fan, K. Shi, Yanhong Zhou, Jingquan Yu, Zhixiang Chen (2010)
Functional Analysis of the Arabidopsis PAL Gene Family in Plant Growth, Development, and Response to Environmental Stress1[W][OA]Plant Physiology, 153
N. Bhuiyan, G. Selvaraj, Y. D. Wei (2009)
Gene expression profiling and silencing reveal that monolignol biosynthesis plays a critical role in penetration defence in wheat against powdery mildew invasion, 60
Peitao Lü, Sheng Yu, Ning Zhu, Yun-Ru Chen, Biyan Zhou, Yu Pan, David Tzeng, J. Fabi, Jason Argyris, J. Garcia-Mas, Nenghui Ye, Jianhua Zhang, D. Grierson, Jenny Xiang, Z. Fei, J. Giovannoni, S. Zhong (2018)
Genome encode analyses reveal the basis of convergent evolution of fleshy fruit ripeningNature Plants, 4
Lu Yang, Wei Huang, Fangjie Xiong, Zhiqiang Xian, Deding Su, Maozhi Ren, Zheng-guo Li (2017)
Silencing of SlPL, which encodes a pectate lyase in tomato, confers enhanced fruit firmness, prolonged shelf‐life and reduced susceptibility to grey mouldPlant Biotechnology Journal, 15
J. Vrebalov, D. Ruezinsky, V. Padmanabhan, Ruth White, Diana Medrano, R. Drake, W. Schuch, J. Giovannoni (2002)
A MADS-Box Gene Necessary for Fruit Ripening at the Tomato Ripening-Inhibitor (Rin) LocusScience, 296
Barbara Blanco‐Ulate, E. Vincenti, D. Cantu, A. Powell (2016)
Ripening of Tomato Fruit and Susceptibility to Botrytis cinerea
(2013)
LYM2-dependent chitin perception
D. Cantu, Ariel Vicente, J. Labavitch, A. Bennett, A. Powell (2008)
Strangers in the matrix: plant cell walls and pathogen susceptibility.Trends in plant science, 13 11
D. Cantu, Ariel Vicente, L. Greve, F. Dewey, A. Bennett, J. Labavitch, A. Powell (2008)
The intersection between cell wall disassembly, ripening, and fruit susceptibility to Botrytis cinereaProceedings of the National Academy of Sciences, 105
L. Jaakola, A. Pirttilä, M. Halonen, A. Hohtola (2001)
Isolation of high quality RNA from bilberry (Vaccinium myrtillus L.) fruitMolecular Biotechnology, 19
Yan-na Shi, Xiao-fen Liu, Xue Li, Wencheng Dong, D. Grierson, Xue‐ren Yin, Kun-song Chen (2017)
SIMYB1 and SIMYB2, two new MYB genes from tomato, transcriptionally regulate cellulose biosynthesis in tobaccoJournal of Integrative Agriculture, 16
Hiroki Irieda, Y. Inoue, M. Mori, Kohji Yamada, Yuuki Oshikawa, H. Saitoh, Aiko Uemura, R. Terauchi, Saeko Kitakura, Ayumi Kosaka, Suthitar Singkaravanit-Ogawa, Y. Takano (2018)
Conserved fungal effector suppresses PAMP-triggered immunity by targeting plant immune kinasesProceedings of the National Academy of Sciences of the United States of America, 116
(2009)
defense responses in tomato plants
T. Fukamizo, S. Shinya (2019)
Chitin/Chitosan-Active Enzymes Involved in Plant-Microbe Interactions.Advances in experimental medicine and biology, 1142
Yasuhiro Ito, Y. Sekiyama, H. Nakayama, Ayako Nishizawa-Yokoi, M. Endo, Y. Shima, N. Nakamura, Eiichi Kotake-Nara, Susumu Kawasaki, S. Hirose, S. Toki (2020)
Allelic Mutations in the Ripening-Inhibitor Locus Generate Extensive Variation in Tomato Ripening1Plant Physiology, 183
Steven Spoel, Xinnian Dong (2012)
How do plants achieve immunity? Defence without specialized immune cellsNature Reviews Immunology, 12
(2014)
mildew invasion
Yoshitake Desaki, Kana Miyata, Maruya Suzuki, N. Shibuya, H. Kaku (2018)
Plant immunity and symbiosis signaling mediated by LysM receptorsInnate Immunity, 24
T. Delaney, S. Uknes, B. Vernooij, L. Friedrich, K. Weymann, D. Negrotto, T. Gaffney, Manuela Gut-Rella, H. Kessmann, E. Ward, J. Ryals (1994)
A Central Role of Salicylic Acid in Plant Disease ResistanceScience, 266
(2006)
A naturally occring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening
Minmin Du, Jiuhai Zhao, David Tzeng, Yuanyuan Liu, Lei Deng, Tianxia Yang, Qingzhe Zhai, Fangming Wu, Zhuoquan Huang, Ming Zhou, Qiao-mei Wang, Qian Chen, S. Zhong, Changbao Li, Chuanyou Li (2017)
MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato[OPEN]Plant Cell, 29
B. Blanco-Ulate, A. Morales-Cruz, K. Amrine (2014)
Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts, 5
(2015)
The battle for chitin recognition
Punit Shah, A. Powell, R. Orlando, C. Bergmann, G. Gutiérrez-Sanchez (2012)
Proteomic analysis of ripening tomato fruit infected by Botrytis cinerea.Journal of proteome research, 11 4
Shan Li, Huijinlan Xu, Zheng Ju, Dongyan Cao, Hongliang Zhu, D. Fu, D. Grierson, G. Qin, Yunbo Luo, B. Zhu (2017)
The RIN-MC Fusion of MADS-Box Transcription Factors Has Transcriptional Activity and Modulates Expression of Many Ripening Genes1Plant Physiology, 176
M. Coppola, G. Diretto, M. Digilio (2019)
Transcriptome and metabolome reprogramming in tomato plants by Trichoderma harzianum strain T22 primes and enhances defense responses against aphids, 10
Hui Shen, Xianzhi He, Charleson Poovaiah, W. Wuddineh, Junying Ma, David Mann, Huanzhong Wang, Lisa Jackson, Yuhong Tang, C. Neal, Stewart Jr, Fang Chen, R. Dixon (2012)
Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks.The New phytologist, 193 1
S. Zhong, Z. Fei, Yun-Ru Chen, Yi Zheng, Mingyun Huang, J. Vrebalov, R. McQuinn, N. Gapper, Bao Liu, Jenny Xiang, Ying Shao, J. Giovannoni (2013)
Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripeningNature Biotechnology, 31
Y. Elad, B. Williamson, P. Tudzynski, N. Delen (2007)
Botrytis: biology, pathology and control.
Sumita Omer, Santosh Kumar, B. Khan (2012)
Over-expression of a subgroup 4 R2R3 type MYB transcription factor gene from Leucaena leucocephala reduces lignin content in transgenic tobaccoPlant Cell Reports, 32
(2019)
Maize phenylalanine ammonia-lyases
Ying Gao, Ning Zhu, Xiaofang Zhu, Meng Wu, Cai-Zhong Jiang, D. Grierson, Yunbo Luo, W. Shen, S. Zhong, D. Fu, Guiqin Qu (2019)
Diversity and redundancy of the ripening regulatory networks revealed by the fruitENCODE and the new CRISPR/Cas9 CNR and NOR mutantsHorticulture Research, 6
(2021)
Host susceptibility factors render ripe
(2014)
Transcriptional regulation of fruit ripening
Xu Zhang, Zhixuan Xu, Lichen Chen, Zhonghai Ren (2019)
Comprehensive analysis of multiprotein bridging factor 1 family genes and SlMBF1c negatively regulate the resistance to Botrytis cinerea in tomatoBMC Plant Biology, 19
(2020)
Phenylpropanoid pathway engineering: an emerging
J. Ascencio-Ibanez, R. Sozzani, T. Lee (2008)
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection, 148
Shan Li, B. Zhu, Julien Pirrello, Changjie Xu, Bo Zhang, M. Bouzayen, Kun-song Chen, D. Grierson (2019)
Roles of RIN and ethylene in tomato fruit ripening and ripening‐associated traitsThe New Phytologist, 226
(2019)
Transcriptome and metabolome reprogramming
(2017)
The epigenome and transcriptional dynamics
A. Molina, E. Miedes, Laura Bacete, Tinguaro Rodríguez, Hugo Mélida, Nicolás Denancé, Andrea Sánchez-Vallet, M. Rivière, G. López, Amandine Freydier, Xavier Barlet, S. Pattathil, M. Hahn, D. Goffner (2020)
Arabidopsis cell wall composition determines disease resistance specificity and fitnessProceedings of the National Academy of Sciences of the United States of America, 118
(2014)
gamma-Aminobutyric acid induces resistance
Li Yang, Kui-Shan Wen, Xiao Ruan, Yingxian Zhao, F. Wei, Qiang Wang (2018)
Response of Plant Secondary Metabolites to Environmental FactorsMolecules : A Journal of Synthetic Chemistry and Natural Product Chemistry, 23
(2016)
Cooperative functioning between phenylalanine
B. Blanco-Ulate, E. Vincenti, A. Powell (2013)
Tomato transcriptome and mutant analyses suggest a role for plant stress hormones in the interaction between fruit and Botrytis cinerea, 4
Hua Lu (2009)
Dissection of salicylic acid-mediated defense signaling networksPlant Signaling & Behavior, 4
R. Hellens, A. Allan, E. Friel, K. Bolitho, K. Grafton, M. Templeton, Sakuntala Karunairetnam, A. Gleave, W. Laing (2005)
Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plantsPlant Methods, 1
(2013)
Tomato transcriptome and mutant analyses
(2020)
Effects of light and daytime on the regulation of chitosan
C. Cass, A. Peraldi, P. Dowd (2015)
Effects of PHENYLALANINE AMMONIA LYASE (PAL) knockdown on cell wall composition, biomass digestibility, and biotic and abiotic stress responses in Brachypodium, 66
Dedong Min, Fujun Li, Xixi Cui, Jingxiang Zhou, Jiaozhuo Li, Wen Ai, Pan Shu, Xinhua Zhang, Xiaoan Li, Demei Meng, Yanyin Guo, Jian Li (2019)
SlMYC2 are required for methyl jasmonate-induced tomato fruit resistance to Botrytis cinerea.Food chemistry, 310
I. Schultz, L. Kiemeney, J. Willems, D. Swinkels, J. Witjes, J. Kok (2006)
Analysis of Relative Gene Expression Data Using Real-time Quantita- Tive Pcr and the 2 Preanalytic Error Tracking in a Laboratory Medicine Department: Results of a 1-year Experience
Dedong Min, Fujun Li, Xinhua Zhang, Pan Shu, Xixi Cui, Lulu Dong, Chuntao Ren, Demei Meng, Jian Li (2018)
Effect of methyl salicylate in combination with 1-methylcyclopropene on postharvest quality and decay caused by Botrytis cinerea in tomato fruit.Journal of the science of food and agriculture, 98 10
Z. Czekus, P. Poor, I. Tari (2020)
Effects of light and daytime on the regulation of chitosan-induced stomatal responses and defence in tomato plants, 9
Shan Li, Kun-song Chen, D. Grierson (2018)
A critical evaluation of the role of ethylene and MADS transcription factors in the network controlling fleshy fruit ripening.The New phytologist, 221 4
Mengyu Liu, Zhen Zhang, Zhixuan Xu, Lina Wang, Chunhua Chen, Zhonghai Ren (2020)
Overexpression of SlMYB75 enhances resistance to Botrytis cinerea and prolongs fruit storage life in tomatoPlant Cell Reports, 40
S. Forlani, S. Masiero, C. Mizzotti (2019)
Fruit ripening: the role of hormones, cell wall modifications, and their relationship with pathogens.Journal of experimental botany, 70 11
(2017)
Involvement of programmed cell death
Guoping Chen, Zongli Hu, D. Grierson (2008)
Differential regulation of tomato ethylene responsive factor LeERF3b, a putative repressor, and the activator Pti4 in ripening mutants and in response to environmental stresses.Journal of plant physiology, 165 6
(2012)
High-resolution mapping of a fruit firmness-related
(2021)
Single and double mutations in tomato ripening
Cui Sun, Lifei Jin, Yiting Cai, Yini Huang, Xiaodong Zheng, Ting Yu (2019)
l-Glutamate treatment enhances disease resistance of tomato fruit by inducing the expression of glutamate receptors and the accumulation of amino acids.Food chemistry, 293
(2013)
A Large-scale identification of direct targets
O. Lorenzo, R. Piqueras, J. Sánchez-Serrano, R. Solano (2003)
ETHYLENE RESPONSE FACTOR1 Integrates Signals from Ethylene and Jasmonate Pathways in Plant Defense Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.007468.The Plant Cell Online, 15
J. Adaskaveg, C. Silva, P. Huang (2021)
Single and double mutations in tomato ripening transcription factors have distinct effects on fruit development and quality traits, 12
N. Chapman, J. Bonnet, L. Grivet (2012)
High-resolution mapping of a fruit firmness-related quantitative trait locus in tomato reveals epistatic interactions associated with a complex combinatorial locus, 159
(2018)
An ETHYLENE RESPONSE FACTOR-MYB
Tomato MADS-RIN (RIN) transcription factor has been shown to be a master activator regulating fruit ripening. Recent studies have revealed that in addition to activating many other cell wall genes, it also represses expression of XTH5, XTH8, and MAN4a, which are positively related to excess flesh softening and cell wall degradation, which might indicate it has a potential role in pathogen resistance of ripening fruit. In this study, both wild-type (WT) and RIN-knockout (RIN-KO) mutant tomato fruit were infected with Botrytis cinerea to investigate the function of RIN in defense against pathogen infection during ripening. The results showed that RIN-KO fruit were much more sensitive to B. cinerea infection with larger lesion sizes. Transcriptome data and qRT-PCR assay indicate genes of phenylalanine ammonialyase (PAL) and chitinase (CHI) in RIN-KO fruit were reduced and their corresponding enzyme activities were decreased. Transcripts of genes encoding pathogenesis-related proteins (PRs), including PR1a, PRSTH2, and APETALA2/Ethylene Response Factor (AP2/ERF) including ERF.A1, Pti5, Pti6, ERF.A4, were reduced in RIN-KO fruit compared to WT fruit. Moreover, in the absence of RIN the expression of genes encoding cell wall-modifying enzymes XTH5, XTH8, MAN4a has been reported to be elevated, which is potentially correlated with cell wall properties. When present, RIN represses transcription of XTH5 by activating ERF.F4, a class II (repressor class) ERF gene family member, and ERF.F5. These results support the conclusion that RIN enhances ripening-related resistance to gray mold infection by upregulating pathogen-resistance genes and defense enzyme activities as well as reducing accumulation of transcripts encoding some cell wall enzymes.
Food Quality and Safety – Oxford University Press
Published: Oct 15, 2021
Keywords: MADS-RIN; tomato fruit; Botrytis cinerea; pathogen resistance; cell wall
Read and print from thousands of top scholarly journals.
Already have an account? Log in
Bookmark this article. You can see your Bookmarks on your DeepDyve Library.
To save an article, log in first, or sign up for a DeepDyve account if you don’t already have one.
Copy and paste the desired citation format or use the link below to download a file formatted for EndNote
Access the full text.
Sign up today, get DeepDyve free for 14 days.
All DeepDyve websites use cookies to improve your online experience. They were placed on your computer when you launched this website. You can change your cookie settings through your browser.