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Vanessa Phelan, Jinshu Fang, P. Dorrestein (2015)
Mass Spectrometry Analysis of Pseudomonas aeruginosa Treated with AzithromycinJournal of The American Society for Mass Spectrometry, 26
F. Aylward, G. Suen, P. Biedermann, Aaron Adams, J. Scott, S. Malfatti, T. Rio, S. Tringe, M. Poulsen, K. Raffa, K. Klepzig, C. Currie (2014)
Convergent Bacterial Microbiotas in the Fungal Agricultural Systems of InsectsmBio, 5
E. Shank, V. Klepac‐Ceraj, L. Collado-Torres, Gordon Powers, R. Losick, R. Kolter (2011)
Interspecies interactions that result in Bacillus subtilis forming biofilms are mediated mainly by members of its own genusProceedings of the National Academy of Sciences, 108
B. Wolfe, R. Dutton (2015)
Fermented Foods as Experimentally Tractable Microbial EcosystemsCell, 161
W. Adlassnig, M. Peroutka, Thomas Lendl (2011)
Traps of carnivorous pitcher plants as a habitat: composition of the fluid, biodiversity and mutualistic activities.Annals of botany, 107 2
Rachel Bleich, J. Watrous, P. Dorrestein, A. Bowers, E. Shank (2015)
Thiopeptide antibiotics stimulate biofilm formation in Bacillus subtilisProceedings of the National Academy of Sciences, 112
Eric Lanni, Rachel Masyuko, C. Driscoll, Jordan Aerts, J. Shrout, P. Bohn, J. Sweedler (2014)
MALDI-guided SIMS: Multiscale Imaging of Metabolites in Bacterial BiofilmsAnalytical Chemistry, 86
Z. Takáts, J. Wiseman, B. Gologan, R. Cooks, Hao Chen, Ismael Cotte-Rodríguez, Y. Song, R. Sparrapan, L. Eberlin, R. Haddad, M. Eberlin, R. Augusti (2004)
Mass Spectrometry Sampling Under Ambient Conditions with Desorption Electrospray IonizationScience, 306
R. Caprioli, T. Farmer, Jocelyn Gile (1997)
Molecular imaging of biological samples: localization of peptides and proteins using MALDI-TOF MS.Analytical chemistry, 69 23
P. Roach, J. Laskin, A. Laskin (2010)
Molecular characterization of organic aerosols using nanospray-desorption/electrospray ionization-mass spectrometry.Analytical chemistry, 82 19
J. Watrous, Vanessa Phelan, Cheng-Chih Hsu, W. Moree, B. Duggan, T. Alexandrov, P. Dorrestein (2013)
Microbial metabolic exchange in 3DThe ISME Journal, 7
Yu-Liang Yang, Yuquan Xu, P. Straight, P. Dorrestein (2009)
Translating metabolic exchange with imaging mass spectrometryNature chemical biology, 5
Vanessa Phelan, W. Moree, J. Aguilar, D. Cornett, A. Koumoutsi, S. Noble, K. Pogliano, C. Guerrero, P. Dorrestein (2014)
Impact of a Transposon Insertion in phzF2 on the Specialized Metabolite Production and Interkingdom Interactions of Pseudomonas aeruginosaJournal of Bacteriology, 196
Jinshu Fang, P. Dorrestein (2014)
Emerging mass spectrometry techniques for the direct analysis of microbial colonies.Current opinion in microbiology, 19
J. Krieger, P. Kourtev (2012)
Bacterial diversity in three distinct sub-habitats within the pitchers of the northern pitcher plant, Sarracenia purpurea.FEMS microbiology ecology, 79 3
R. Goodwin, P. Scullion, L. MacIntyre, D. Watson, A. Pitt (2010)
Use of a solvent-free dry matrix coating for quantitative matrix-assisted laser desorption ionization imaging of 4-bromophenyl-1,4-diazabicyclo(3.2.2)nonane-4-carboxylate in rat brain and quantitative analysis of the drug from laser microdissected tissue regions.Analytical chemistry, 82 9
M. Medema, K. Blin, Peter Cimermancic, V. Jager, Piotr Zakrzewski, M. Fischbach, T. Weber, E. Takano, R. Breitling (2011)
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequencesNucleic Acids Research, 39
Katherine Louie, B. Bowen, Xiaoliang Cheng, James Berleman, R. Chakraborty, A. Deutschbauer, A. Arkin, T. Northen (2013)
"Replica-extraction-transfer" nanostructure-initiator mass spectrometry imaging of acoustically printed bacteria.Analytical chemistry, 85 22
Chhavi Bhardwaj, Jerry Moore, Yang Cui, Gerald Gasper, Hans Bernstein, R. Carlson, L. Hanley (2013)
Laser desorption VUV postionization MS imaging of a cocultured biofilmAnalytical and Bioanalytical Chemistry, 405
B. Hoefler, K. Gorzelnik, Jane Yang, Nathan Hendricks, P. Dorrestein, P. Straight (2012)
Enzymatic resistance to the lipopeptide surfactin as identified through imaging mass spectrometry of bacterial competitionProceedings of the National Academy of Sciences, 109
Kristen Murfin, Ming-Min Lee, J. Klassen, B. McDonald, B. McDonald, B. Larget, S. Forst, S. Stock, C. Currie, C. Currie, H. Goodrich-Blair (2015)
Xenorhabdus bovienii Strain Diversity Impacts Coevolution and Symbiotic Maintenance with Steinernema spp. Nematode HostsmBio, 6
C. Aguilar, H. Vlamakis, R. Losick, R. Kolter (2007)
Thinking about Bacillus subtilis as a multicellular organism.Current opinion in microbiology, 10 6
Martin Kaltenpoth, K. Strupat, A. Svatoš (2015)
Linking metabolite production to taxonomic identity in environmental samples by (MA)LDI-FISHThe ISME Journal, 10
Jane Yang, Vanessa Phelan, Ryan Simkovsky, J. Watrous, Rachelle Trial, Tinya Fleming, Roland Wenter, B. Moore, S. Golden, K. Pogliano, P. Dorrestein (2012)
Primer on Agar-Based Microbial Imaging Mass SpectrometryJournal of Bacteriology, 194
J. Watrous, P. Roach, T. Alexandrov, Brandi Heath, Jane Yang, R. Kersten, M. Voort, K. Pogliano, H. Gross, J. Raaijmakers, B. Moore, J. Laskin, N. Bandeira, P. Dorrestein (2012)
Mass spectral molecular networking of living microbial coloniesProceedings of the National Academy of Sciences, 109
K. Tateda, R. Comte, J. Pechère, T. Köhler, K. Yamaguchi, C. Delden (2001)
Azithromycin Inhibits Quorum Sensing in Pseudomonas aeruginosaAntimicrobial Agents and Chemotherapy, 45
Yusuf Nalca, L. Jänsch, Florian Bredenbruch, R. Geffers, J. Buer, S. Häussler (2006)
Quorum-Sensing Antagonistic Activities of Azithromycin in Pseudomonas aeruginosa PAO1: a Global ApproachAntimicrobial Agents and Chemotherapy, 50
R. Amin, A. Dupuis, S. Aaron, F. Ratjen (2010)
The effect of chronic infection with Aspergillus fumigatus on lung function and hospitalization in patients with cystic fibrosis.Chest, 137 1
I. Bruijn, Xu Cheng, Victor Jager, R. Exposito, J. Watrous, Nrupali Patel, J. Postma, P. Dorrestein, D. Kobayashi, J. Raaijmakers (2015)
Comparative genomics and metabolic profiling of the genus LysobacterBMC Genomics, 16
Don Nguyen, Cheng-Hsuan Wu, W. Moree, Anne Lamsa, M. Medema, Xiling Zhao, R. Gavilán, Marystella Aparicio, Librada Atencio, Chanaye Jackson, Javier Ballesteros, Joel Sánchez, J. Watrous, Vanessa Phelan, C. Wiel, R. Kersten, Samina Mehnaz, R. Mot, E. Shank, Pep Charusanti, Harish Nagarajan, B. Duggan, B. Moore, N. Bandeira, B. Palsson, K. Pogliano, Marcelino Gutiérrez, P. Dorrestein (2013)
MS/MS networking guided analysis of molecule and gene cluster familiesProceedings of the National Academy of Sciences, 110
J. Watrous, P. Dorrestein (2011)
Imaging mass spectrometry in microbiologyNature Reviews Microbiology, 9
A. Akhmetov, Chhavi Bhardwaj, L. Hanley (2015)
Laser desorption postionization mass spectrometry imaging of biological targets.Methods in molecular biology, 1203
Thomas Hoffmann, P. Dorrestein (2015)
Homogeneous Matrix Deposition on Dried Agar for MALDI Imaging Mass Spectrometry of Microbial CulturesJournal of The American Society for Mass Spectrometry, 26
Amina Bouslimani, Carla Porto, Christopher Rath, Mingxun Wang, Yurong Guo, Antonio González, Donna Berg-Lyon, G. Ackermann, Gitte Christensen, T. Nakatsuji, Lingjuan Zhang, A. Borkowski, M. Meehan, Kathleen Dorrestein, R. Gallo, N. Bandeira, R. Knight, T. Alexandrov, P. Dorrestein (2015)
Molecular cartography of the human skin surface in 3DProceedings of the National Academy of Sciences, 112
E. Mowat, R. Rajendran, Craig Williams, E. Mcculloch, B. Jones, S. Lang, G. Ramage (2010)
Pseudomonas aeruginosa and their small diffusible extracellular molecules inhibit Aspergillus fumigatus biofilm formation.FEMS microbiology letters, 313 2
H. Woo, T. Northen, Ó. Yanes, G. Siuzdak (2008)
Nanostructure-initiator mass spectrometry: a protocol for preparing and applying NIMS surfaces for high-sensitivity mass analysisNature Protocols, 3
Eric Lanni, Rachel Masyuko, C. Driscoll, Sage Dunham, J. Shrout, P. Bohn, J. Sweedler (2014)
Correlated Imaging with C60-SIMS and Confocal Raman Microscopy: Visualization of Cell-Scale Molecular Distributions in Bacterial BiofilmsAnalytical Chemistry, 86
Riya Menezes, M. Kai, K. Krause, C. Matthäus, A. Svatoš, J. Popp, E. Kothe (2015)
Monitoring metabolites from Schizophyllum commune interacting with Hypholoma fasciculare combining LESA–HR mass spectrometry and Raman microscopyAnalytical and Bioanalytical Chemistry, 407
Charlotte Michelsen, S. Khademi, H. Johansen, H. Ingmer, P. Dorrestein, L. Jelsbak (2015)
Evolution of metabolic divergence in Pseudomonas aeruginosa during long-term infection facilitates a proto-cooperative interspecies interactionThe ISME Journal, 10
Leslie Silva, T. Northen (2015)
Exometabolomics and MSI: deconstructing how cells interact to transform their small molecule environment.Current opinion in biotechnology, 34
David Gonzalez, Yuquan Xu, Yu-Liang Yang, E. Esquenazi, Wei-Ting Liu, Anna Edlund, Tram Duong, Liangcheng Du, István Molnár, William Gerwick, Paul Jensen, Michael Fischbach, Chih-Chuang Liaw, Paul Straight, Victor Nizet, P. Dorrestein (2012)
Observing the invisible through imaging mass spectrometry, a window into the metabolic exchange patterns of microbes.Journal of proteomics, 75 16
W. Moree, Vanessa Phelan, Cheng-Hsuan Wu, N. Bandeira, D. Cornett, B. Duggan, P. Dorrestein (2012)
Interkingdom metabolic transformations captured by microbial imaging mass spectrometryProceedings of the National Academy of Sciences, 109
Matthew Traxler, J. Watrous, T. Alexandrov, P. Dorrestein, R. Kolter (2013)
Interspecies Interactions Stimulate Diversification of the Streptomyces coelicolor Secreted MetabolomemBio, 4
Hui Ye, Erin Gemperline, Muthusubramanian Venkateshwaran, Ruibing Chen, P. Delaux, Maegen Howes-Podoll, Jean-Michel Ané, Lingjun Li (2013)
MALDI mass spectrometry-assisted molecular imaging of metabolites during nitrogen fixation in the Medicago truncatula-Sinorhizobium meliloti symbiosis.The Plant journal : for cell and molecular biology, 75 1
J. Watrous, P. Roach, Brandi Heath, T. Alexandrov, J. Laskin, P. Dorrestein (2013)
Metabolic profiling directly from the Petri dish using nanospray desorption electrospray ionization imaging mass spectrometry.Analytical chemistry, 85 21
S. Trimpin, E. Inutan, Thushani Herath, C. McEwen (2010)
Matrix-assisted laser desorption/ionization mass spectrometry method for selectively producing either singly or multiply charged molecular ions.Analytical chemistry, 82 1
P. Straight, J. Willey, R. Kolter (2006)
Interactions between Streptomyces coelicolor and Bacillus subtilis: Role of Surfactants in Raising Aerial StructuresJournal of Bacteriology, 188
The ability of microbes to secrete bioactive chemical signals into their environment has been known for over a century. However, it is only in the last decade that imaging mass spectrometry has provided us with the ability to directly visualize the spatial distributions of these microbial metabolites. This technology involves collecting mass spectra from multiple discrete locations across a biological sample, yielding chemical ‘maps’ that simultaneously reveal the distributions of hundreds of metabolites in two dimensions. Advances in microbial imaging mass spectrometry summarized here have included the identification of novel strain- or coculture-specific compounds, the visualization of biotransformation events (where one metabolite is converted into another by a neighboring microbe), and the implementation of a method to reconstruct the 3D subsurface distributions of metabolites, among others. Here we review the recent literature and discuss how imaging mass spectrometry has spurred novel insights regarding the chemical consequences of microbial interactions.
FEMS Microbiology Reviews – Oxford University Press
Published: Nov 1, 2016
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