Investigation of phase transitions of saturated phosphocholine lipid bilayers via molecular dynamics simulations

Investigation of phase transitions of saturated phosphocholine lipid bilayers via molecular... Lipid bilayers play an important role in biological systems as they protect cells against unwanted chemicals and provide a barrier for material inside a cell from leaking out. In this paper, nearly 30 μs of molecular dynamics (MD) simulations were performed to investigate phase transitions of 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) and 1,2-dipalmitoyl-sn-glycero-phosphocholine (DPPC) lipid bilayers from the liquid crystalline (Lα) to the ripple (Pβ) and to the gel phase (Lβ). Our MD simulations accurately predict the main transition temperature for the single-component bilayers. A key focus of this work is to quantify the structure of the Pβ phase for DMPC and compare with measures from x-ray experiments. The Pβ major arm has similar structure to that of the Lβ, while the thinner minor arm has interdigitated chains and the transition region between these two regions has large chain splay and disorder. At lower temperatures, our MD simulations predict the formation of the Lβ phase with tilted fatty acid chains. The Pβ and Lβ phases are studied for mixtures of DMPC and DPPC and compare favorably with experiment. Overall, our MD simulations provide evidence for the relevancy of the CHARMM36 lipid force field for structures and add to our understanding of the less-defined Pβ phase. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Biochimica et Biophysica Acta Biomembranes Or Bba Biomembranes Elsevier

Investigation of phase transitions of saturated phosphocholine lipid bilayers via molecular dynamics simulations

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Publisher
Elsevier
Copyright
Copyright © 2018 Elsevier B.V.
ISSN
0005-2736
eISSN
1879-2642
D.O.I.
10.1016/j.bbamem.2018.04.014
Publisher site
See Article on Publisher Site

Abstract

Lipid bilayers play an important role in biological systems as they protect cells against unwanted chemicals and provide a barrier for material inside a cell from leaking out. In this paper, nearly 30 μs of molecular dynamics (MD) simulations were performed to investigate phase transitions of 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) and 1,2-dipalmitoyl-sn-glycero-phosphocholine (DPPC) lipid bilayers from the liquid crystalline (Lα) to the ripple (Pβ) and to the gel phase (Lβ). Our MD simulations accurately predict the main transition temperature for the single-component bilayers. A key focus of this work is to quantify the structure of the Pβ phase for DMPC and compare with measures from x-ray experiments. The Pβ major arm has similar structure to that of the Lβ, while the thinner minor arm has interdigitated chains and the transition region between these two regions has large chain splay and disorder. At lower temperatures, our MD simulations predict the formation of the Lβ phase with tilted fatty acid chains. The Pβ and Lβ phases are studied for mixtures of DMPC and DPPC and compare favorably with experiment. Overall, our MD simulations provide evidence for the relevancy of the CHARMM36 lipid force field for structures and add to our understanding of the less-defined Pβ phase.

Journal

Biochimica et Biophysica Acta Biomembranes Or Bba BiomembranesElsevier

Published: Aug 1, 2018

References

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