Genomic data resolve gene tree discordance in spiderhunters (Nectariniidae, Arachnothera)

Genomic data resolve gene tree discordance in spiderhunters (Nectariniidae, Arachnothera) Molecular Phylogenetics and Evolution 120 (2018) 151–157 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Genomic data resolve gene tree discordance in spiderhunters (Nectariniidae, Arachnothera) a, b b a Luke C. Campillo , Carl H. Oliveros , Frederick H. Sheldon , Robert G. Moyle Biodiversity Institute and Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS 66045, USA Museum of Natural Science and Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA ARTICLE I NFO ABSTRACT Keywords: Reduced representation genomic sequencing methods efficiently gather sequence data from thousands of loci Deep coalescence throughout the genome. These data can be used to test previous phylogenetic hypotheses produced from limited Hypogramma hypogrammicum numbers of mitochondrial and nuclear loci that often reveal intriguing, but conflicting, results. In this paper, we Sunbirds use phylogenomic data to revisit recent molecular phylogenetic work that clarified many taxonomic relation- UCEs ships within spiderhunters, but also questioned the monophyly of this distinctive genus of sunbirds (AVES: Uninformative loci Nectariniidae; Arachnothera). DNA sequence data were produced by target-capture sequencing of ultraconserved elements (UCEs) to infer the evolutionary history of 11 species of Arachnothera and six outgroups, including the Purple-naped http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Molecular Phylogenetics and Evolution Elsevier

Genomic data resolve gene tree discordance in spiderhunters (Nectariniidae, Arachnothera)

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Publisher
Elsevier
Copyright
Copyright © 2017 Elsevier Inc.
ISSN
1055-7903
eISSN
1095-9513
D.O.I.
10.1016/j.ympev.2017.12.011
Publisher site
See Article on Publisher Site

Abstract

Molecular Phylogenetics and Evolution 120 (2018) 151–157 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Genomic data resolve gene tree discordance in spiderhunters (Nectariniidae, Arachnothera) a, b b a Luke C. Campillo , Carl H. Oliveros , Frederick H. Sheldon , Robert G. Moyle Biodiversity Institute and Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS 66045, USA Museum of Natural Science and Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA ARTICLE I NFO ABSTRACT Keywords: Reduced representation genomic sequencing methods efficiently gather sequence data from thousands of loci Deep coalescence throughout the genome. These data can be used to test previous phylogenetic hypotheses produced from limited Hypogramma hypogrammicum numbers of mitochondrial and nuclear loci that often reveal intriguing, but conflicting, results. In this paper, we Sunbirds use phylogenomic data to revisit recent molecular phylogenetic work that clarified many taxonomic relation- UCEs ships within spiderhunters, but also questioned the monophyly of this distinctive genus of sunbirds (AVES: Uninformative loci Nectariniidae; Arachnothera). DNA sequence data were produced by target-capture sequencing of ultraconserved elements (UCEs) to infer the evolutionary history of 11 species of Arachnothera and six outgroups, including the Purple-naped

Journal

Molecular Phylogenetics and EvolutionElsevier

Published: Mar 1, 2018

References

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