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Phylogenetic inference of mitochondrial control region (501 bp) of 167 individuals from 12 regional populations revealed that Chinese swamp eels fell into five genetic lineages, Lineage A, B, C, D ...
. Evidence for positive selection at nuclear diagnostic genes was obtained using multilocus extensions of the McDonald–Kreitman test with polymorphism data from each species. In contrast, mitochondrial protein ...
were assembled to reference sequences from S. intermedia texana (KU904486) and S. lacertina (KU904488) for mitochondrial gene sequences for 12S, and 16S cytochrome oxidase 1 (COI), NADH dehydrogenase 5 ...
monophyletic groups of AFFs. Results indicated that ten lineages originated from direct, but asynchronous, marine-to- freshwater shifts. These lineages contribute < 2% to the current AFF species richness. Eleven ...
requires a calibrated phylogeny . In the case of Gobiomorphus, the single comprehensive phylogenetic study of the group used a small fragment of the cytochrome b gene , but the resulting mitochondrial ...
) Moore WS. Inferring phylogenies from mtDNA variation: mitochondrial - gene trees versus nuclear- gene trees, Evolution , 1995, vol. 49 (pg. 718- 726) Google Scholar CrossRef Search ADS Motohashi E ...
analysis of pufferfish mitochondrial genomes (Yamanoue Y, unpublished data) and that of ten nuclear protein-coding genes from various actinopterygians (Li et al. 2008). We set only three partitions ...
of a paired fin, however, would be inferred from the absence of its girdle, as seen in Acanthostracion quadricornis (Fig. 2) based on multiple voucher specimens from the Academy of Natural Sciences ...
from mitochondrial DNA sequences. Zool. Sci. 19: 1305-1312. Google Scholar Honda, M., Y. Yasukawa, and H. Ota. 2002. Phylogeny of the Eurasian freshwater turtles of the genus Mauremys Gray, 1869 ...
. 1). For each rearranged mitochondrial genome, we infer the minimum set of contiguous genes that, when duplicated, creates an intermediate sequence from which gene losses could have established ...
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