Access the full text.
Sign up today, get DeepDyve free for 14 days.
Loading next page...
/lp/wiley/structure-of-the-conserved-domain-of-anac-a-member-of-the-nac-family-vBhY3s3Lxi
References (34)
-
Christoph Müller (2001)
Transcription factors: global and detailed views.Current opinion in structural biology, 11 1
-
M. Allen, K. Yamasaki, M. Ohme-Takagi, M. Tateno, Masashi Suzuki (1998)
A novel mode of DNA recognition by a β‐sheet revealed by the solution structure of the GCC‐box binding domain in complex with DNAThe EMBO Journal, 17
-
S. Hoth, M. Morgante, J. Sánchez, M. Hanafey, S. Tingey, N. Chua (2002)
Genome-wide gene expression profiling in Arabidopsis thaliana reveals new targets of abscisic acid and largely impaired gene regulation in the abi1-1 mutantJournal of Cell Science, 115
-
M. Collinge, T. Boller (2001)
Differential induction of two potato genes, Stprx2 and StNAC, in response to infection by Phytophthora infestans and to woundingPlant Molecular Biology, 46
-
A. Perrakis, R. Morris, V. Lamzin (1999)
Automated protein model building combined with iterative structure refinementNature Structural Biology, 6
-
The Initiative (2000)
Analysis of the genome sequence of the flowering plant Arabidopsis thalianaNature, 408
-
Krestine Greve, T. Cour, M. Jensen, F. Poulsen, K. Skriver (2003)
Interactions between plant RING-H2 and plant-specific NAC (NAM/ATAF1/2/CUC2) proteins: RING-H2 molecular specificity and cellular localization.The Biochemical journal, 371 Pt 1
-
P. Kraulis (1991)
A program to produce both detailed and schematic plots of protein structures -
T. Jones, J. Zou, S. Cowan, M. Kjeldgaard, Serge HAGgGE (1991)
Improved methods for building protein models in electron density maps and the location of errors in these models.Acta crystallographica. Section A, Foundations of crystallography, 47 ( Pt 2)
-
M. Tateno, K. Yamasaki, N. Amano, J. Kakinuma, H. Koike, M. Allen, Masashi Suzuki (1997)
DNA recognition by β‐sheetsBiopolymers, 44
-
M. Duval, T. Hsieh, S. Kim, T. Thomas (2002)
Molecular characterization of AtNAM: a member of theArabidopsis NAC domain superfamilyPlant Molecular Biology, 50
-
PJ Kraulis (1991)
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structuresJ Appl Crystallogr, 24
-
E. Souer, A. Houwelingen, Daisy Kloos, J. Mol, R. Koes (1996)
The No Apical Meristem Gene of Petunia Is Required for Pattern Formation in Embryos and Flowers and Is Expressed at Meristem and Primordia BoundariesCell, 85
-
TC Terwilliger (2000)
Maximum‐likelihood density modificationActa Crystallogr D, 56
-
A. Nicholls, K. Sharp, B. Honig (1991)
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbonsProteins: Structure, 11
-
(2004)
EMBO reports VOL 5 | NO -
J. Thompson, D. Higgins, T. Gibson (1994)
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.Nucleic acids research, 22 22
-
N. Luscombe, S. Austin, H. Berman, J. Thornton (2000)
An overview of the structures of protein-DNA complexesGenome Biology, 1
-
Structure of the Arabidopsis NAC domain -
A. Olsen, H. Ernst, L. Leggio, E. Johansson, S. Larsen, K. Skriver (2004)
Preliminary crystallographic analysis of the NAC domain of ANAC, a member of the plant-specific NAC transcription factor family.Acta crystallographica. Section D, Biological crystallography, 60 Pt 1
-
Tao Ren, F. Qu, T. Morris (2000)
HRT Gene Function Requires Interaction between a NAC Protein and Viral Capsid Protein to Confer Resistance to Turnip Crinkle VirusPlant Cell, 12
-
E. Merritt, David Bacon (1997)
Raster3D: photorealistic molecular graphics.Methods in enzymology, 277
-
Serge Cohen, M. Moulin, S. Hashemolhosseini, K. Kilian, M. Wegner, C. Müller (2003)
Structure of the GCM domain–DNA complex: a DNA‐binding domain with a novel fold and mode of target site recognitionThe EMBO Journal, 22
-
Qi Xie, G. Frugis, D. Colgan, N. Chua (2000)
Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development.Genes & development, 14 23
-
Q. Xie, Hui Guo, G. Dallman, Shengyun Fang, A. Weissman, N. Chua (2002)
SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signalsNature, 419
-
D. Gilbert, D. Westhead, Juris Viksna, J. Thornton (2001)
A Computer System to Perform Structure Comparison using Representations of Protein StructureComputers & chemistry, 26 1
-
M. Aida, T. Ishida, H. Fukaki, Hisao Fujisawa, M. Tasaka (1997)
Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.The Plant cell, 9
-
J. Riechmann, Jacqueline Heard, George Martin, T. Reuber, C. Jiang, J. Keddie, L. Adam, O. Pineda, O. Ratcliffe, Raymond Samaha, R. Creelman, M. Pilgrim, P. Broun, James Zhang, D. Ghandehari, B. Sherman, Guo-Liang Yu (2000)
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.Science, 290 5499
-
G. Murshudov, A. Vagin, E. Dodson (1997)
Refinement of macromolecular structures by the maximum-likelihood method.Acta crystallographica. Section D, Biological crystallography, 53 Pt 3
-
T. Terwilliger, J. Berendzen (1999)
Automated MAD and MIR structure solutionActa Crystallographica Section D: Biological Crystallography, 55
-
Axel Brüngera, Paul Adamsb, G. Clorec, Warren DeLanod, Piet Grose, Ralf Grosse-Kunstlevea, Jian-Sheng Jiangf, John Kuszewskic, Michael Nilgesg, Navraj Pannuh, Randy Readi, Luke Riceb, Thomas Simonsonj, Gregory Warrenb (1998)
Crystallography & NMR system: A new software suite for macromolecular structure determination.Acta crystallographica. Section D, Biological crystallography, 54 Pt 5
-
T. Terwilliger
Electronic Reprint Biological Crystallography Maximum-likelihood Density Modification Using Pattern Recognition of Structural Motifs Pattern Recognition of Structural Motifs -
Q. Xie, A. Sanz-Burgos, Huishan Guo, J. García, C. Gutiérrez (1999)
GRAB proteins, novel members of the NAC domain family, isolated by their interaction with a geminivirus proteinPlant Molecular Biology, 39
-
L. Holm, C. Sander (1993)
Protein structure comparison by alignment of distance matrices.Journal of molecular biology, 233 1
- Publisher
- Wiley
- Copyright
- Copyright © 2013 Wiley Periodicals, Inc
- ISSN
- 1469-221X
- eISSN
- 1469-3178
- DOI
- 10.1038/sj.embor.7400093
- pmid
- 15083810
- Publisher site
- See Article on Publisher Site
Abstract
The structure of the DNA‐binding NAC domain of Arabidopsis ANAC (abscisic‐acid‐responsive NAC) has been determined by X‐ray crystallography to 1.9 Å resolution (Protein Data Bank codes 1UT4 and 1UT7). This is the first structure determined for a member of the NAC family of plant‐specific transcriptional regulators. NAC proteins are characterized by their conserved N‐terminal NAC domains that can bind both DNA and other proteins. NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain does not possess a classical helix–turn–helix motif; instead it reveals a new transcription factor fold consisting of a twisted β‐sheet surrounded by a few helical elements. The functional dimer formed by the NAC domain was identified in the structure, which will serve as a structural template for understanding NAC protein function at the molecular level.
Journal
EMBO Reports – Wiley
Published: Mar 1, 2004
Keywords: ; ; ; ; ;