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Christine Gemünd, Chenna Ramu, Brigitte Altenberg-Greulich, Toby Gibson (2001)
Gene2EST: a BLAST2 server for searching expressed sequence tag (EST) databases with eukaryotic gene-sized queries.Nucleic acids research, 29 6
K. Joho, M. Darby, E. Crawford, Donald Brown (1990)
A finger protein structurally similar to TFIIIA that binds exclusively to 5S RNA in XenopusCell, 61
C. Nüsslein-Volhard, E. Wieschaus (1980)
Mutations affecting segment number and polarity in DrosophilaNature, 287
(1959)
New mutants report
A. Peter, P. Schöttler, M. Werner, N. Beinert, G. Dowe, P. Burkert, F. Mourkioti, Lore Dentzer, Yuchun He, P. Deák, P. Benos, M. Gatt, L. Murphy, D. Harris, B. Barrell, C. Ferraz, S. Vidal, C. Brun, J. Demaille, É. Cadieu, S. Dréano, S. Gloux, V. Lelaure, S. Mottier, F. Galibert, D. Borkova, B. Miñana, F. Kafatos, S. Bolshakov, I. Sidén-Kiamos, G. Papagiannakis, L. Spanos, C. Louis, E. Madueño, B. Pablos, J. Modolell, A. Bucheton, D. Callister, L. Campbell, Nadine Henderson, P. McMillan, C. Salles, E. Tait, P. Valenti, R. Saunders, Alain Billaud, L. Pachter, R. Klapper, W. Janning, D. Glover, M. Ashburner, H. Bellen, H. Jäckle, U. Schäfer (2002)
Mapping and identification of essential gene functions on the X chromosome of DrosophilaEMBO reports, 3
Ann Sluder, C. Maina (2001)
Nuclear receptors in nematodes: themes and variations.Trends in genetics : TIG, 17 4
U. Rosenberg, C. Schröder, A. Preiss, A. Kienlin, S. Côté, I. Riede, H. Jäckle (1986)
Structural homology of the product of the Drosophila Krüppel gene with Xenopus transcription factor IIIANature, 319
B. Rost (1996)
PHD: predicting one-dimensional protein structure by profile-based neural networks.Methods in enzymology, 266
F. Payre, P. Buono, N. Vanzo, A. Vincent (1997)
Two types of zinc fingers are required for dimerization of the serendipity delta transcriptional activatorMolecular and Cellular Biology, 17
E. Birney, J. Thompson, T. Gibson (1996)
PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames.Nucleic acids research, 24 14
Gary Ruvkun, Oliver Hobert (1998)
The taxonomy of developmental control in Caenorhabditis elegans.Science, 282 5396
J. Thompson, D. Higgins, T. Gibson (1994)
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.Nucleic acids research, 22 22
Siegfried Böhm, Dmitrij Frishman, H. Mewes (1997)
Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins.Nucleic acids research, 25 12
S. Altschul, Thomas Madden, A. Schäffer, Jinghui Zhang, Zheng Zhang, W. Miller, D. Lipman (1997)
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.Nucleic acids research, 25 17
O. Ptitsyn, A. Finkelstein (1989)
Prediction of protein secondary structure based on physical theory. Histones.Protein engineering, 2 6
T. Hubbard, D. Barker, E. Birney, G. Cameron, Yuan Chen, Laura Clarke, Tony Cox, James Cuff, V. Curwen, T. Down, R. Durbin, E. Eyras, J. Gilbert, M. Hammond, L. Huminiecki, A. Kasprzyk, H. Lehväslaiho, P. Lijnzaad, Craig Melsopp, Emmanuel Mongin, Roger Pettett, M. Pocock, Simon Potter, A. Rust, E. Schmidt, S. Searle, G. Slater, James Smith, W. Spooner, Arne Stabenau, J. Stalker, E. Stupka, A. Ureta-Vidal, Imre Vastrik, M. Clamp (2002)
The Ensembl genome database projectNucleic acids research, 30 1
V. Bhaskar, Scott Valentine, A. Courey (2000)
A Functional Interaction between Dorsal and Components of the Smt3 Conjugation Machinery*The Journal of Biological Chemistry, 275
D. Mccormick (1986)
Sequence the Human GenomeBio/Technology, 4
S. Chervitz, L. Aravind, G. Sherlock, C. Ball, E. Koonin, S. Dwight, M. Harris, K. Dolinski, S. Mohr, Temple Smith, S. Weng, J. Cherry, D. Botstein (1998)
Comparison of the complete protein sets of worm and yeast: orthology and divergence.Science, 282 5396
Ivica Letunic, L. Goodstadt, N. Dickens, T. Doerks, J. Schultz, R. Mott, F. Ciccarelli, R. Copley, C. Ponting, P. Bork (2002)
Recent improvements to the SMART domain-based sequence annotation resourceNucleic acids research, 30 1
F. Payre, M. Crozatier, A. Vincent (1994)
Direct control of transcription of the Drosophila morphogen bicoid by the serendipity delta zinc finger protein, as revealed by in vivo analysis of a finger swap.Genes & development, 8 22
F. Payre, S. Noselli, V. Lefrère, A. Vincent (1990)
The closely related Drosophila sry beta and sry delta zinc finger proteins show differential embryonic expression and distinct patterns of binding sites on polytene chromosomes.Development, 110 1
Tucker Collins, J. Stone, A. Williams (2001)
All in the Family: the BTB/POZ, KRAB, and SCAN DomainsMolecular and Cellular Biology, 21
M. Gaszner, J. Vazquez, P. Schedl (1999)
The Zw5 protein, a component of the scs chromatin domain boundary, is able to block enhancer-promoter interaction.Genes & development, 13 16
International Consortium (2001)
Initial sequencing and analysis of the human genomeNature, 409
Dusan Štanojević, T. Hoey, M. Levine (1989)
Sequence-specific DNA-binding activities of the gap proteins encoded by hunchback and Krüppel in DrosophilaNature, 341
Magnus Malmqvist (1996)
Epitope Mapping by Label-Free Biomolecular Interaction AnalysisMethods, 9 3
J. Riechmann, Jacqueline Heard, George Martin, T. Reuber, C. Jiang, J. Keddie, L. Adam, O. Pineda, O. Ratcliffe, Raymond Samaha, R. Creelman, M. Pilgrim, P. Broun, James Zhang, D. Ghandehari, B. Sherman, Guo-Liang Yu (2000)
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.Science, 290 5499
N. Mozden, H. Misra, E. Rhem, D. Beaton, David Stern, T. Laverty, C. Stern, T. Laverty, Rachael Rubin, A. Spradling, G. Rubin, A. Spradling, D. Ho (1999)
The Berkeley Drosophila Genome Project gene disruption project: Single P-element insertions mutating 25% of vital Drosophila genes.Genetics, 153 1
S. Eddy (1998)
Profile hidden Markov modelsBioinformatics, 14 9
Trudi Schüpbach, Eric Wieschaus (1989)
Female sterile mutations on the second chromosome of Drosophila melanogaster. I. Maternal effect mutations.Genetics, 121 1
Robert Finn, Jaina Mistry, John Tate, Penny Coggill, Andreas Heger, Joanne Pollington, O. Gavin, Prasad Gunasekaran, Goran Ceric, Kristoffer Forslund, Liisa Holm, Erik Sonnhammer, Sean Eddy, Alex Bateman (2007)
The Pfam protein families databaseNucleic Acids Research, 38
B. Chen, E. Harms, T. Chu, G. Henrion, S. Strickland (2000)
Completion of meiosis in Drosophila oocytes requires transcriptional control by grauzone, a new zinc finger protein.Development, 127 6
M. Crozatier, K. Kongsuwan, P. Ferrer, J. Merriam, J. Lengyel, A. Vincent (1992)
Single amino acid exchanges in separate domains of the Drosophila serendipity delta zinc finger protein cause embryonic and sex biased lethality.Genetics, 131 4
E. Harms, T. Chu, G. Henrion, S. Strickland (2000)
The only function of Grauzone required for Drosophila oocyte meiosis is transcriptional activation of the cortex gene.Genetics, 155 4
O. Lespinet, Y. Wolf, E. Koonin, L. Aravind (2002)
The role of lineage-specific gene family expansion in the evolution of eukaryotes.Genome research, 12 7
(1993)
PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author
G. Reuter, M. Giarrè, J. Farah, J. Gausz, A. Spierer, P. Spierer (1990)
Dependence of position-effect variegation in Drosophila on dose of a gene encoding an unusual zinc-finger proteinNature, 344
A. Preiss, U. Rosenberg, A. Kienlin, E. Seifert, H. Jäckle (1985)
Molecular genetics of Krüppel, a gene required for segmentation of the Drosophila embryoNature, 313
C2H2 zinc‐finger proteins (ZFPs) constitute the largest family of nucleic acid binding factors in higher eukaryotes. In silico analysis identified a total of 326 putative ZFP genes in the Drosophila genome, corresponding to ∼2.3% of the annotated genes. Approximately 29% of the Drosophila ZFPs are evolutionary conserved in humans and/or Caenorhabditis elegans. In addition, ∼28% of the ZFPs contain an N‐terminal zinc‐finger‐associated C4DM domain (ZAD) consisting of ∼75 amino acid residues. The ZAD is restricted to ZFPs of dipteran and closely related insects. The evolutionary restriction, an expansion of ZAD‐containing ZFP genes in the Drosophila genome and their clustering at few chromosomal sites are features reminiscent of vertebrate KRAB‐ZFPs. ZADs are likely to represent protein–protein interaction domains. We propose that ZAD‐containing ZFP genes participate in transcriptional regulation either directly or through site‐specific modification and/or regulation of chromatin.
EMBO Reports – Wiley
Published: Dec 1, 2002
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