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References (53)
-
J. Eisen, K. Nelson, I. Paulsen, J. Heidelberg, Martin Wu, R. Dodson, R. Deboy, M. Gwinn, W. Nelson, D. Haft, E. Hickey, J. Peterson, A. Durkin, James Kolonay, Fan Yang, I. Holt, L. Umayam, T. Mason, M. Brenner, T. Shea, Debbie Parksey, W. Nierman, T. Feldblyum, Cheryl Hansen, M. Craven, D. Radune, J. Vamathevan, H. Khouri, O. White, T. Gruber, K. Ketchum, K. Ketchum, J. Venter, H. Tettelin, D. Bryant, C. Fraser (2002)
The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacteriumProceedings of the National Academy of Sciences of the United States of America, 99
-
L Dufosse, C Echanove (2005)
The last step in the biosynthesis of aryl carotenoids in the cheese ripening bacteria Brevibacterium linens ATCC9175 (Brevibacterium aurantiacum sp. Nov.) involves a cytochrome P450-dependent monooxygenaseCarotenoid Sci, 9
-
G. Schnurr, N. Misawa, Gerhard Sandmann (1996)
Expression, purification and properties of lycopene cyclase from Erwinia uredovora.The Biochemical journal, 315 ( Pt 3)
-
JA Maresca, NU Frigaard, DA Bryant (2005)
Identification of a novel class of lycopene cyclases in photosynthetic organisms -
H Park, SS Kreunen, AJ Cuttriss, D DellaPenna, BJ Pogson (2002)
Identification of the carotenoid isomerase provides insight into carotenoid biosynthesis, prolamellar body formation, and photomorphogenesisPlant Cell, 14
-
H. Alper, K. Miyaoku, G. Stephanopoulos (2005)
Construction of lycopene-overproducing E. coli strains by combining systematic and combinatorial gene knockout targetsNature Biotechnology, 23
-
P. Krubasik, G. Sandmann (2000)
Molecular evolution of lycopene cyclases involved in the formation of carotenoids with ionone end groups.Biochemical Society transactions, 28 6
-
Tal Isaacson, I. Ohad, P. Beyer, J. Hirschberg (2004)
Analysis in Vitro of the Enzyme CRTISO Establishes a Poly-cis-Carotenoid Biosynthesis Pathway in Plants1Plant Physiology, 136
-
S. Takaichi, Zheng‐Yu Wang, M. Umetsu, T. Nozawa, K. Shimada, M. Madigan (1997)
New carotenoids from the thermophilic green sulfur bacterium Chlorobium tepidum: 1′,2′-dihydro-γ-carotene, 1′,2′-dihydrochlorobactene, and OH-chlorobactene glucoside ester, and the carotenoid composition of different strainsArchives of Microbiology, 168
-
E. Garí, J. Toledo, I. Gibert, J. Barbé (1992)
Nucleotide sequence of the methoxyneurosporene dehydrogenase gene* from Rhodobacter sphaeroides: Comparison with other bacterial carotenoid dehydrogenasesFems Microbiology Letters, 93
-
N. Misawa, Y. Satomi, K. Kondo, Akihiro Yokoyama, S. Kajiwara, Toshiko Saito, T. Ohtani, W. Miki (1995)
Structure and functional analysis of a marine bacterial carotenoid biosynthesis gene cluster and astaxanthin biosynthetic pathway proposed at the gene levelJournal of Bacteriology, 177
-
P. Beyer, U. Kröncke, V. Nievelstein (1991)
On the mechanism of the lycopene isomerase/cyclase reaction in Narcissus pseudonarcissus L. chromoplasts.The Journal of biological chemistry, 266 26
-
Benjamin Mijts, Pyung-Cheon Lee, C. Schmidt-Dannert (2005)
Identification of a carotenoid oxygenase synthesizing acyclic xanthophylls: combinatorial biosynthesis and directed evolution.Chemistry & biology, 12 4
-
L Dufosse (2005)
Brevibacterium aurantiacum, carotenogenic hydrox mutant: a unique source of isorenieratene, carotenoid now readily available for biological function assessmentCarotenoid Sci, 9
-
F. Cunningham, Zairen Sun, Daniel Chamovitz, Joseph Hirschberg, E. Gantt (1994)
Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942.The Plant cell, 6
-
A. Yokoyama, H. Izumida, Y. Shizuri (1996)
New Carotenoid Sulfates Isolated from a Marine BacteriumBioscience, Biotechnology, and Biochemistry, 60
-
Tal Isaacson, G. Ronen, D. Zamir, J. Hirschberg (2002)
Cloning of tangerine from tomato reveals a carotenoid isomerase essential for the production of beta-carotene and xanthophylls in plants.The Plant cell, 14 2
-
L. Hannibal, J. Lorquin, Nicolas D’ORTOLI, N. Garcia, C. Chaintreuil, Catherine Masson-Boivin, B. Dreyfus, E. Giraud (2000)
Isolation and Characterization of Canthaxanthin Biosynthesis Genes from the Photosynthetic Bacterium Bradyrhizobiumsp. Strain ORS278Journal of Bacteriology, 182
-
L. Tao, A. Schenzle, J. Odom, Q. Cheng (2005)
Novel Carotenoid Oxidase Involved in Biosynthesis of 4,4′-Diapolycopene DialdehydeApplied and Environmental Microbiology, 71
-
Hyoungshin Park, S. Kreunen, Abby Cuttriss, D. DellaPenna, B. Pogson (2002)
Identification of the Carotenoid Isomerase Provides Insight into Carotenoid Biosynthesis, Prolamellar Body Formation, and Photomorphogenesis Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010302.The Plant Cell Online, 14
-
L. Tao, S. Picataggio, P. Rouvière, Q. Cheng (2004)
Asymmetrically acting lycopene β-cyclases (CrtLm) from non-photosynthetic bacteriaMolecular Genetics and Genomics, 271
-
R. Peck, Eric Johnson, M. Krebs (2002)
Identification of a Lycopene β-Cyclase Required for Bacteriorhodopsin Biogenesis in the Archaeon Halobacterium salinarumJournal of Bacteriology, 184
-
M. Mochimaru, H. Masukawa, S. Takaichi (2005)
The cyanobacterium Anabaena sp. PCC 7120 has two distinct β‐carotene ketolases: CrtO for echinenone and CrtW for ketomyxol synthesisFEBS Letters, 579
-
I. Pecker, R. Gabbay, F. Cunningham, J. Hirschberg (1996)
Cloning and characterization of the cDNA for lycopene β-cyclase from tomato reveals decrease in its expression during fruit ripeningPlant Molecular Biology, 30
-
L. Dufossé, M. Echanove (2005)
The last step in the biosynthesis of aryl carotenoids in the cheese ripening bacteria Brevibacterium linens ATCC 9175 (Brevibacterium aurantiacum sp. nov.) involves a cytochrome P450-dependent monooxygenaseFood Research International, 38
-
P. Hugueney, A. Badillo, Hsu-Ching Chen, A. Klein, Joseph Hirschberg, B. Camara, Marcel Kuntz (1995)
Metabolism of cyclic carotenoids: a model for the alteration of this biosynthetic pathway in Capsicum annuum chromoplasts.The Plant journal : for cell and molecular biology, 8 3
-
A. Velayos, A. Eslava, E. Iturriaga (2000)
A bifunctional enzyme with lycopene cyclase and phytoene synthase activities is encoded by the carRP gene of Mucor circinelloides.European journal of biochemistry, 267 17
-
L. Baldomá, J. Badía, G. Sweet, J. Aguilar (1990)
Cloning, mapping and gene product identification of rhaT from Escherichia coli K12Fems Microbiology Letters, 72
-
S. Jensen, E. Hegge, L. Jackman, D. Sparrow (1964)
Bacterial Carotenoids. XVII. The Carotenoids of Photosynthetic Green Bacteria.Acta Chemica Scandinavica, 18
-
H. Krügel, P. Krubasik, Kerstin Weber, H. Saluz, G. Sandmann (1999)
Functional analysis of genes from Streptomyces griseus involved in the synthesis of isorenieratene, a carotenoid with aromatic end groups, revealed a novel type of carotenoid desaturase.Biochimica et biophysica acta, 1439 1
-
G. Armstrong, M. Alberti, F. Leach, J. Hearst (1989)
Nucleotide sequence, organization, and nature of the protein products of the carotenoid biosynthesis gene cluster of Rhodobacter capsulatusMolecular and General Genetics MGG, 216
-
U. Misra, M. Gonzalez-Gronow, G. Gawdi, Salvatore Pizzo (1997)
Up-regulation of the α2-Macroglobulin Signaling Receptor on Rheumatoid Synovial Fibroblasts*The Journal of Biological Chemistry, 272
-
M. Viveiros, P. Krubasik, G. Sandmann, M. Houssaini-Iraqui (2000)
Structural and functional analysis of the gene cluster encoding carotenoid biosynthesis in Mycobacterium aurum A+.FEMS microbiology letters, 187 1
-
L. Pasamontes, D. Hug, M. Tessier, H. Hohmann, J. Schierle, A. Loon (1997)
Isolation and characterization of the carotenoid biosynthesis genes of Flavobacterium sp. strain R1534.Gene, 185 1
-
G. Armstrong (1999)
2.12 – Carotenoid Genetics and Biochemistry, 2
-
M. Teramoto, S. Takaichi, Y. Inomata, H. Ikenaga, N. Misawa (2003)
Structural and functional analysis of a lycopene β‐monocyclase gene isolated from a unique marine bacterium that produces myxolFEBS Letters, 545
-
Nabil Arrach, Rafael Fernández-Martín, E. Cerdá-Olmedo, Javier Avalos (2001)
A single gene for lycopene cyclase, phytoene synthase, and regulation of carotene biosynthesis in Phycomyces.Proceedings of the National Academy of Sciences of the United States of America, 98 4
-
S. Kajiwara, T. Kakizono, Toshiko Saito, K. Kondo, T. Ohtani, N. Nishio, S. Nagai, N. Misawa (1995)
Isolation and functional identification of a novel cDNA for astaxanthin biosynthesis from Haematococcus pluvialis, and astaxanthin synthesis in Escherichia coliPlant Molecular Biology, 29
-
P. Krubasik, G. Sandmann (2000)
A carotenogenic gene cluster from Brevibacterium linens with novel lycopene cyclase genes involved in the synthesis of aromatic carotenoidsMolecular and General Genetics MGG, 263
-
H. Linden, N. Misawa, Toshiko Saito, G. Sandmann (2004)
A novel carotenoid biosynthesis gene coding for ζ-carotene desaturase: functional expression, sequence and phylogenetic originPlant Molecular Biology, 24
-
K. Masamoto, H. Wada, T. Kaneko, S. Takaichi (2001)
Identification of a gene required for cis-to-trans carotene isomerization in carotenogenesis of the cyanobacterium Synechocystis sp. PCC 6803.Plant & cell physiology, 42 12
-
N. Arrach, Schmidhauser Tj, J. Avalos (2002)
Mutants of the carotene cyclase domain of al-2 from Neurospora crassaMolecular Genetics and Genomics, 266
-
J. Breitenbach, G. Sandmann (2005)
ζ-Carotene cis isomers as products and substrates in the plant poly-cis carotenoid biosynthetic pathway to lycopenePlanta, 220
-
G. Sandmann (1994)
Phytoene Desaturase: Genes, Enzymes and Phylogenetic AspectsJournal of Plant Physiology, 143
-
Yasuhiro Nishida, K. Adachi, H. Kasai, Y. Shizuri, K. Shindo, A. Sawabe, S. Komemushi, W. Miki, N. Misawa (2005)
Elucidation of a Carotenoid Biosynthesis Gene Cluster Encoding a Novel Enzyme, 2,2′-β-Hydroxylase, from Brevundimonas sp. Strain SD212 and Combinatorial Biosynthesis of New or Rare XanthophyllsApplied and Environmental Microbiology, 71
-
H. Hemmi, Satoru Ikejiri, T. Nakayama, T. Nishino (2003)
Fusion-type lycopene beta-cyclase from a thermoacidophilic archaeon Sulfolobus solfataricus.Biochemical and biophysical research communications, 305 3
-
B. Fernández-González, G. Sandmann, A. Vioque (1997)
A New Type of Asymmetrically Acting β-Carotene Ketolase Is Required for the Synthesis of Echinenone in the Cyanobacterium Synechocystis sp. PCC 6803*The Journal of Biological Chemistry, 272
-
B. Wieland, Éva, GLORIA-MAERCKER, Gunther, Thumm, M. Lechner, J. Bravo, Karl, Poralla (1994)
Genetic and biochemical analyses of the biosynthesis of the yellow carotenoid 4,4'-diaponeurosporene of Staphylococcus aureusJournal of Bacteriology, 176
-
J. Breitenbach, A. Vioque, G. Sandmann (2001)
Gene sll0033 from Synechocystis 6803 Encodes a Carotene Isomerase Involved in the Biosynthesis of all-E LycopeneZeitschrift für Naturforschung C, 56
-
A. Yokoyama, W. Miki, H. Izumida, Y. Shizuri (1996)
New Trihydroxy-keto-carotenoids Isolated from an Astaxanthin-producing Marine Bacterium.Bioscience, biotechnology, and biochemistry, 60 2
-
L. Tao, Q. Cheng (2004)
Novel β-carotene ketolases from non-photosynthetic bacteria for canthaxanthin synthesisMolecular Genetics and Genomics, 272
-
F. Cunningham, B. Pogson, Zairen Sun, K. McDonald, D. DellaPenna, E. Gantt (1996)
Functional analysis of the beta and epsilon lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation.The Plant cell, 8
-
J. Verdoes, P. Krubasik, G. Sandmann, A. Ooyen (1999)
Isolation and functional characterisation of a novel type of carotenoid biosynthetic gene from Xanthophyllomyces dendrorhousMolecular and General Genetics MGG, 262
- Publisher
- Springer Journals
- Copyright
- Copyright © 2006 by Society for Industrial Microbiology
- Subject
- Chemistry; Microbial Genetics and Genomics; Microbiology ; Bioinformatics; Biochemistry, general; Genetic Engineering; Biotechnology
- ISSN
- 1367-5435
- eISSN
- 1476-5535
- DOI
- 10.1007/s10295-006-0121-4
- pmid
- 16609853
- Publisher site
- See Article on Publisher Site
Abstract
Many new carotenoid synthesis genes have recently been identified through genomic sequencing or functional cloning. Some of them exhibit novel structures and/or novel functions. This review describes such examples in the families of lycopene β-cyclases, putative homologues of phytoene dehydrogenases and new carotenoid hydroxylases. Both the functionally novel lycopene β-monocyclases and structurally novel fusion-type of lycopene β-cyclases were described. Another newly discovered sequence of lycopene β-cyclase described might represent a new class of lycopene β-cyclases previously not identified in several cyanobacteria. Three examples of putative homologues of phytoene dehydrogenases were described, however, they were confirmed to encode different and/or new functions such as β-carotene ketolase, 4,4′-diapolycopene oxygenase or prolycopene isomerase. Two new carotenoid hydroxylase genes were described that encoded the new function of 2,2′-β-ionone ring hydroxylase or 3,3′-isorenieratene hydroxylase. Phylogenetic analysis of these genes shed light on their possible evolutionary origins. These new genes also provide tools for synthesis of novel and desirable carotenoids by genetic engineering.
Journal
Journal of Industrial Microbiology Biotechnology – Springer Journals
Published: Apr 12, 2006