Access the full text.
Sign up today, get DeepDyve free for 14 days.
L. Ramsay, M. Macaulay, S. Ivanissevich, K. MacLean, L. Cardle, J. Fuller, K. Edwards, S. Tuvesson, M. Morgante, A. Massari, E. Maestri, N. Marmiroli, T. Sjakste, M. Ganal, W. Powell, R. Waugh (2000)
A simple sequence repeat-based linkage map of barley.Genetics, 156 4
M. Bennett, J. Smith (1976)
Nuclear dna amounts in angiosperms.Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 274 933
M. Maroof, R. Biyashev, Guangsheng Yang, Qingyi Zhang, R. Allard (1994)
Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics.Proceedings of the National Academy of Sciences of the United States of America, 91 12
T. Holton, J. Christopher, Linda McClure, N. Harker, R. Henry (2004)
Identification and mapping of polymorphic SSR markers from expressed gene sequences of barley and wheatMolecular Breeding, 9
N. Sharopova, M. McMullen, L. Schultz, Steven Schroeder, Hector Sanchez-Villeda, J. Gardiner, Dean Bergstrom, K. Houchins, S. Melia-Hancock, T. Musket, Ngozi Duru, M. Polacco, K. Edwards, T. Ruff, J. Register, Cory Brouwer, Richard Thompson, R. Velasco, E. Chin, Michael Lee, W. Woodman-Clikeman, M. Long, E. Liscum, K. Cone, G. Davis, E. Coe (2002)
Development and mapping of SSR markers for maizePlant Molecular Biology, 48
D. Kosambi (1943)
The estimation of map distances from recombination values.Annals of Human Genetics, 12
B. Søgaard, P. Wettstein-knowles (1987)
Barley: Genes and chromosomesCarlsberg Research Communications, 52
M. Macaulay, L. Ramsay, W. Powell, R. Waugh (2001)
A representative, highly informative ’genotyping set’ of barley SSRsTheoretical and Applied Genetics, 102
L. Cardle, L. Ramsay, D. Milbourne, M. Macaulay, D. Marshall, R. Waugh (2000)
Computational and experimental characterization of physically clustered simple sequence repeats in plants.Genetics, 156 2
A. Kleinhofs, A. Kilian, M. Maroof, R. Biyashev, P. Hayes, F. Chen, N. Lapitan, A. Fenwick, T. Blake, V. Kanazin, E. Ananiev, L. Dahleen, D. Kudrna, J. Bollinger, S. Knapp, B. Liu, M. Sorrells, M. Heun, J. Franckowiak, D. Hoffman, R. Skadsen, B. Steffenson (1993)
A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genomeTheoretical and Applied Genetics, 86
S. Temnykh, W. Park, N. Ayres, S. Cartinhour, N. Hauck, L. Lipovich, Yong-Gu Cho, T. Ishii, S. McCouch (2000)
Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.)Theoretical and Applied Genetics, 100
Joanne Russell, John Fuller, G. Young, B. Thomas, Malcolm Macaulay, Robbie Waugh, Wayne Powell, Graziana Taramino (1997)
Discriminating between barley genotypes using microsatellite markers.Genome, 40 4
Künzel G., Waugh R. (2002)
Integration of microsatellite markers into the translocation-based physical RFLP map of barley chromosome 3HTheoretical and Applied Genetics, 105
P. Gupta, H. Balyan, K. Edwards, P. Isaac, V. Korzun, M. Röder, M. Gautier, P. Joudrier, A. Schlatter, J. Dubcovsky, R. Peña, M. Khairallah, G. Penner, M. Hayden, P. Sharp, B. Keller, R. Wang, J. Hardouin, P. Jack, P. Leroy (2002)
Genetic mapping of 66 new microsatellite (SSR) loci in bread wheatTheoretical and Applied Genetics, 105
J. Becker, M. Heun (1995)
Barley microsatellites: allele variation and mappingPlant Molecular Biology, 27
G. Künzel, L. Korzun, A. Meister (2000)
Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints.Genetics, 154 1
Y. Xu, Lihuang Zhu, J. Xiao, N. Huang, S. McCouch (1997)
Chromosomal regions associated with segregation distortion of molecular markers in F2 , backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L.)Molecular and General Genetics MGG, 253
M. Knox, T. Ellis (2002)
Excess heterozygosity contributes to genetic map expansion in pea recombinant inbred populations.Genetics, 162 2
T. Lyttle (1991)
Segregation distorters.Annual review of genetics, 25
(1990)
The informativeness of human (dC-dA)n (dG-dT)n polymorphism
D. Struss, J. Plieske (1998)
The use of microsatellite markers for detection of genetic diversity in barley populationsTheoretical and Applied Genetics, 97
R. Koebner, P. Donini, J. Reeves, R. Cooke, J. Law (2003)
Temporal flux in the morphological and molecular diversity of UK barleyTheoretical and Applied Genetics, 106
J. Russell, R. Ellis, W. Thomas, R. Waugh, J. Provan, A. Booth, J. Fuller, P. Lawrence, G. Young, W. Powell (2000)
A retrospective analysis of spring barley germplasm development from `foundation genotypes' to currently successful cultivarsMolecular Breeding, 6
T. Thiel, W. Michalek, R. Varshney, A. Graner (2003)
Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)Theoretical and Applied Genetics, 106
K. Pillen, A. Binder, B. Kreuzkam, L. Ramsay, R. Waugh, J. Förster, J. Léon (2000)
Mapping new EMBL-derived barley microsatellites and their use in differentiating German barley cultivarsTheoretical and Applied Genetics, 101
M. Smulders, G. Bredemeijer, W. Rus-Kortekaas, P. Arens, B. Vosman (1997)
Use of short microsatellites from database sequences to generate polymorphisms among Lycopersicon esculentum cultivars and accessions of other Lycopersicon speciesTheoretical and Applied Genetics, 94
J. Shin, S. Chao, L. Corpuz, T. Blake (1990)
A partial map of the barley genome incorporating restriction fragment length polymorphism, polymerase chain reaction, isozyme, and morphological marker loci.Genome, 33 6
M. Röder, V. Korzun, K. Wendehake, J. Plaschke, M. Tixier, P. Leroy, M. Ganal (1998)
A microsatellite map of wheat.Genetics, 149 4
Andreas Graner, A. Jahoor, J. Schondelmaier, H. Siedler, Klaus Pillen, G. Fischbeck, Gerhard Wenzel, Reinhold Herrmann (1991)
Construction of an RFLP map of barleyTheoretical and Applied Genetics, 83
B. Foroughi-Wehr, W. Friedt (1984)
Rapid production of recombinant barley yellow mosaic virus resistant Hordeum vulgare lines by anther cultureTheoretical and Applied Genetics, 67
(2000)
A retrospective analysis of spring barley germplasm from ’foundation genotypes’ to currently successful cultivars
(1944)
The estimation of map distance from recombination values
M. Heun, A. Kennedy, J. Anderson, N. Lapitan, M. Sorrells, S. Tanksley (1991)
Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare)Genome, 34
Sin-Chieh Liu, Stanley Kowalski, T. Lan, Kenneth Feldmann, Andrew Paterson, Andrew Paterson (1996)
Genome-wide high-resolution mapping by recurrent intermating using Arabidopsis thaliana as a model.Genetics, 142 1
E. Pestsova, M. Ganal, M. Röder (2000)
Isolation and mapping of microsatellite markers specific for the D genome of bread wheat.Genome, 43 4
J. Anderson, G. Churchill, J. Autrique, S. Tanksley, M. Sorrells (1993)
Optimizing parental selection for genetic linkage maps.Genome, 36 1
E. Lander, E. Lander, P. Green, Jeff Abrahamson, A. Barlow, M. Daly, S. Lincoln, Lee Newburg (1987)
MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.Genomics, 1 2
José Costa, A. Corey, P. Hayes, C. Jobet, A. Kleinhofs, A. Kopisch-Obusch, S. Kramer, D. Kudrna, Ming Li, O. Riera-Lizarazu, Kazuhiro Sato, P. Szűcs, T. Toojinda, M. Vales, R. Wolfe (2001)
Molecular mapping of the Oregon Wolfe Barleys: a phenotypically polymorphic doubled-haploid populationTheoretical and Applied Genetics, 103
L. Pépin, Y. Amigues, A. Lépingle, J. Berthier, A. Bensaid, Daniel Vaiman (1995)
Sequence conservation of microsatellites between Bos taurus (cattle), Capra hircus (goat) and related species. Examples of use in parentage testing and phylogeny analysisHeredity, 74
(2002)
Identification and mapping of polymorphic SSR markers from expressed sequences of barley and wheat
A. Islam, K Shepherd, D Sparrow (1981)
Isolation and characterization of euplasmic wheat-barley chromosome addition linesHeredity, 46
Tatjana Sjakste, Isaak Rashal, Marion Röder (2003)
Inheritance of microsatellite alleles in pedigrees of Latvian barley varieties and related European ancestorsTheoretical and Applied Genetics, 106
E. Chani, V. Ashkenazi, J. Hillel, R. Veilleux (2002)
Microsatellite marker analysis of an anther-derived potato family: skewed segregation and gene-centromere mapping.Genome, 45 2
Z. Liu, R. Biyashev, M. Maroof (1996)
Development of simple sequence repeat DNA markers and their integration into a barley linkage mapTheoretical and Applied Genetics, 93
J. Weber (1990)
Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms.Genomics, 7 4
To enhance the marker density of existing genetic maps of barley ( Hordeum vulgare L.), a new set of microsatellite markers containing dinucleotide motifs was developed from genomic clones. Out of 254 primer pairs tested, a total of 167 primer pairs were classifed as functional in a panel of six barley cultivars and three H. spontaneum accessions, and of those, 127 primer pairs resulting in 133 loci were either mapped or located onto chromosomes. The polymorphism information content (PIC) ranged from 0.05 to 0.94 with an average of 0.60. The number of alleles per locus varied from 1 to 9. On average, 3.9 alleles per primer pair were observed. The RFLP frameworks of two previously published linkage maps were used to locate a total of 115 new microsatellite loci on at least one mapping population. The chromosomal assignment of 48 mapped loci was corroborated on a set of wheat-barley chromosome addition lines; 18 additional loci which were not polymorphic in the mapping populations were assigned to chromosomes by this method. The microsatellites were located on all seven linkage groups with four significant clusters in the centromeric regions of 2H, 3H, 6H and 7H. These newly developed microsatellites improve the density of existing barley microsatellite maps and can be used in genetic studies and breeding research.
TAG Theoretical and Applied Genetics – Springer Journals
Published: Oct 1, 2003
Read and print from thousands of top scholarly journals.
Already have an account? Log in
Bookmark this article. You can see your Bookmarks on your DeepDyve Library.
To save an article, log in first, or sign up for a DeepDyve account if you don’t already have one.
Copy and paste the desired citation format or use the link below to download a file formatted for EndNote
Access the full text.
Sign up today, get DeepDyve free for 14 days.
All DeepDyve websites use cookies to improve your online experience. They were placed on your computer when you launched this website. You can change your cookie settings through your browser.