Access the full text.
Sign up today, get DeepDyve free for 14 days.
UNM Digital Repository UNM Digital Repository Effects of size and temperature on metabolic rate Effects of size and temperature on metabolic rate
Zak Zak, Willig Willig, Moorhead Moorhead, Wildman Wildman (1994)
Functional diversity of microbial communitiesSoil Biology and Biochemistry, 26
D. White, W. Davis, J. Nickels, J. King, R. Bobbie (2004)
Determination of the sedimentary microbial biomass by extractible lipid phosphateOecologia, 40
B. Marschner, A. Bredow (2002)
Temperature effects on release and ecologically relevant properties of dissolved organic carbon in sterilised and biologically active soil samplesSoil Biology & Biochemistry, 34
L. Verchot (1999)
Cold storage of a tropical soil decreases nitrification potentialSoil Science Society of America Journal, 63
A. Townsend, P. Vitousek, E. Holland (1992)
Tropical soils could dominate the short-term carbon cycle feedbacks to increased global temperaturesClimatic Change, 22
K. Ekschmitt, Manqiang Liu, S. Vetter, Oliver Fox, V. Wolters (2005)
Strategies used by soil biota to overcome soil organic matter stability — why is dead organic matter left over in the soil?Geoderma, 128
E. Bååth, T. Anderson (2003)
Comparison of soil fungal/bacterial ratios in a pH gradient using physiological and PLFA-based techniquesSoil Biology & Biochemistry, 35
G. Ågren, R. Hyvönen, T. Nilsson (2007)
Are Swedish forest soils sinks or sources for CO2—model analyses based on forest inventory dataBiogeochemistry, 82
(2005)
Bacteria and archaea. In: Principles and Applications of Soil Microbiology (eds Sylvia DM
M. Kirschbaum (2006)
The temperature dependence of organic-matter decomposition - still a topic of debateSoil Biology & Biochemistry, 38
Bossio Bossio, Scow Scow (1998)
Impacts of carbon and flooding on soil microbial communitiesMicrobial Ecology, 35
G. Ågren, J. Wetterstedt (2007)
What determines the temperature response of soil organic matter decompositionSoil Biology & Biochemistry, 39
T. Ise, P. Moorcroft (2006)
The global-scale temperature and moisture dependencies of soil organic carbon decomposition: an analysis using a mechanistic decomposition modelBiogeochemistry, 80
D. Lipson, Michelle Blair, G. Barron‐Gafford, Kathrine Grieve, R. Murthy (2006)
Relationships Between Microbial Community Structure and Soil Processes Under Elevated Atmospheric Carbon DioxideMicrobial Ecology, 51
B. Emmett, C. Beier, M. Estiarte, A. Tietema, H. Kristensen, Dylan Williams, J. Peñuelas, I. Schmidt, A. Sowerby (2004)
The Response of Soil Processes to Climate Change: Results from Manipulation Studies of Shrublands Across an Environmental GradientEcosystems, 7
T. Wutzler, M. Reichstein (2008)
Colimitation of decomposition by substrate and decomposers - a comparison of model formulationsBiogeosciences, 5
Keith Smith, T. Ball, F. Conen, K. Dobbie, J. Massheder, A. Rey (2003)
Exchange of greenhouse gases between soil and atmosphere: interactions of soil physical factors and biological processesEuropean Journal of Soil Science, 54
A. Townsend, P. Vitousek, S. Trumbore (1995)
Soil organic matter dynamics along gradients in temperature and land use on the Island of HawaiiEcology, 76
J. Andrews, R. Matamala, Kristi Westover, W. Schlesinger (2000)
Temperature effects on the diversity of soil heterotrophs and the δ13C of soil-respired CO2.Soil Biology & Biochemistry, 32
S. Lyles (1969)
Biology of microorganisms
Neil MacDonald, D. Zak, K. Pregitzer (1995)
Temperature Effects on Kinetics of Microbial Respiration and Net Nitrogen and Sulfur MineralizationSoil Science Society of America Journal, 59
M. Waldrop, M. Firestone (2004)
Altered utilization patterns of young and old soil C by microorganisms caused by temperature shifts and N additionsBiogeochemistry, 67
S. Trumbore, O. Chadwick, R. Amundson (1996)
Rapid Exchange Between Soil Carbon and Atmospheric Carbon Dioxide Driven by Temperature ChangeScience, 272
S. Solomon (2007)
The Physical Science Basis : Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change, 996
Davidson Davidson, Janssens Janssens, Luo Luo (2006)
On the variability of respiration in terrestrial ecosystemsGlobal Change Biology, 12
(2005)
Chapter 5 . Bacteria and archaea
Pendall Pendall, Bridgham Bridgham, Hanson Hanson (2004)
Below‐ground process responses to elevated CO 2 and temperatureNew Phytologist, 162
V. Allison, Zhanna Yermakov, R. Miller, J. Jastrow, R. Matamala (2007)
Using landscape and depth gradients to decouple the impact of correlated environmental variables on soil microbial community compositionSoil Biology & Biochemistry, 39
T. Balser, M. Firestone (2005)
Linking microbial community composition and soil processes in a California annual grassland and mixed-conifer forestBiogeochemistry, 73
J. Yuste, D. Baldocchi, A. Gershenson, A. Goldstein, L. Misson, S. Wong (2007)
Microbial soil respiration and its dependency on carbon inputs, soil temperature and moistureGlobal Change Biology, 13
R. Bol, T. Bolger, R. Cully, D. Little (2003)
Recalcitrant soil organic materials mineralize more efficiently at higher temperaturesJournal of Plant Nutrition and Soil Science, 166
P. Dalias, Jonathan Anderson, P. Bottner, M. Coûteaux (2001)
Temperature responses of carbon mineralization in conifer forest soils from different regional climates incubated under standard laboratory conditionsGlobal Change Biology, 7
J. Lloyd, John Taylor (1994)
On the temperature dependence of soil respirationFunctional Ecology, 8
D. Moorhead, R. Sinsabaugh (2006)
A THEORETICAL MODEL OF LITTER DECAY AND MICROBIAL INTERACTIONEcological Monographs, 76
M. Waldrop, M. Waldrop, M. Firestone (2006)
Response of Microbial Community Composition and Function to Soil Climate ChangeMicrobial Ecology, 52
Qi Qi, Xu Xu, Wu Wu (2002)
Temperature sensitivity of soil respiration and its effects on ecosystem carbon budgetEcological Modelling, 153
S. Simpson, Jay Quade, P. Renne, Robert Butler, William McIntosh, Naomi Levin, Manuel Dominguez-Rodrigo, Michael Rogers (2005)
Long-term sensitivity of soil carbon turnover to warmingNature, 433
Alan, R., Townsend (2007)
Soil Organic Matter Dynamics Along Gradients in Temperature and Land Use on the Island of
J. Fraterrigo, T. Balser, M. Turner (2006)
Microbial community variation and its relationship with nitrogen mineralization in historically altered forests.Ecology, 87 3
R. Izaurralde, J. Williams, W. Post, A. Thomson, W. McGill, L. Owens, R. Lal (2007)
Long-term modeling of soil C erosion and sequestration at the small watershed scaleClimatic Change, 80
J. Schimel, T. Balser, M. Wallenstein (2007)
Microbial stress-response physiology and its implications for ecosystem function.Ecology, 88 6
Kuzyakov Kuzyakov, Blagodatskaya Blagodatskaya, Blagodatsky Blagodatsky (2009)
‘Comments on the paper by Kemmitt et al. (2008) ‘Mineralization of native soil organic matter is not regulated by the size, activity or composition of the soil microbial biomass – a new perspective’ (Soil Biology & Biochemistry 40, 61–73)Soil Biology and Biochemistry, 41
Å. Frostegård, E. Bååth, A. Tunlio (1993)
Shifts in the structure of soil microbial communities in limed forests as revealed by phospholipid fatty acid analysisSoil Biology & Biochemistry, 25
W. Parton, D. Schimel, C. Cole, D. Ojima (1987)
Analysis of factors controlling soil organic matter levels in Great Plains grasslandsSoil Science Society of America Journal, 51
W. Silver (1998)
The Potential Effects of Elevated Co2 and Climate Change on Tropical Forest Soils and Biogeochemical CyclingClimatic Change, 39
D. Lipson (2007)
Relationships between temperature responses and bacterial community structure along seasonal and altitudinal gradients.FEMS microbiology ecology, 59 2
L. Gu, W. Post, A. King (2004)
Fast labile carbon turnover obscures sensitivity of heterotrophic respiration from soil to temperature: A model analysisGlobal Biogeochemical Cycles, 18
Muller Muller, Hoper Hoper (2004)
Soil organic matter turnover as a function of the soil clay contentSoil Biology and Biochemistry, 36
M. Tuomi, P. Vanhala, Kristiina Karhu, H. Fritze, J. Liski (2008)
Heterotrophic soil respiration—Comparison of different models describing its temperature dependenceEcological Modelling, 211
J. Møller, Morten Miller, A. Kjøller (1999)
Fungal–bacterial interaction on beech leaves: influence on decomposition and dissolved organic carbon qualitySoil Biology & Biochemistry, 31
S. Trumbore (1993)
Comparison of carbon dynamics in tropical and temperate soils using radiocarbon measurementsGlobal Biogeochemical Cycles, 7
B. Ellert, J. Bettany (1992)
Temperature dependence of net nitrogen and sulfur mineralizationSoil Science Society of America Journal, 56
Q. Liu, Nelson Edwards, W. Post, Lianhong Gu, Joanne Ledford, Suzanne Lenhart (2006)
Temperature‐independent diel variation in soil respiration observed from a temperate deciduous forestGlobal Change Biology, 12
C. Rasmussen, R. Southard, W. Horwath (2006)
Mineral control of organic carbon mineralization in a range of temperate conifer forest soilsGlobal Change Biology, 12
D. Tison, D. Pope (1980)
Effect of temperature on mineralization by heterotrophic bacteriaApplied and Environmental Microbiology, 39
Møller Møller, Miller Miller, Kjøller Kjøller (1999)
Fungal–bacterial interaction on beech leavesSoil Biology and Biochemistry, 31
J. Zak, M. Willig, D. Moorhead, H. Wildman (1994)
Functional diversity of microbial communities: A quantitative approachSoil Biology & Biochemistry, 26
M. Aneja, Shilpi Sharma, F. Fleischmann, S. Stich, W. Heller, G. Bahnweg, J. Munch, M. Schloter (2006)
Microbial Colonization of Beech and Spruce Litter—Influence of Decomposition Site and Plant Litter Species on the Diversity of Microbial CommunityMicrobial Ecology, 52
J. Garland (1996)
Analytical approaches to the characterization of samples of microbial communities using patterns of potential C source utilizationSoil Biology & Biochemistry, 28
E. Holland, A. Townsend, P. Vitousek (1995)
Variability in temperature regulation of CO2 fluxes and N mineralization from five Hawaiian soils: implications for a changing climateGlobal Change Biology, 1
R. Conant, R. Drijber, M. Haddix, W. Parton, E. Paul, A. Plante, J. Six, J. Steinweg (2007)
Sensitivity of organic matter decomposition to warming varies with its qualityGlobal Change Biology, 14
S. Grosso, W. Parton, A. Mosier, Elisabeth Holland, Elise Pendall, D. Schimel, D. Ojima (2005)
Modeling soil CO2 emissions from ecosystemsBiogeochemistry, 73
E. Pendall, L. Rustad, J. Schimel (2008)
Towards a predictive understanding of belowground process responses to climate change: have we moved any closer?Functional Ecology, 22
W. Post, W. Emanuel, P. Zinke, A. Stangenberger (1982)
Soil carbon pools and world life zonesNature, 298
F. Conen, J. Leifeld, B. Seth, C. Alewell (2006)
Warming mineralises young and old soil carbon equallyBiogeosciences, 3
Matthew Rodman (1965)
General MicrobiologyMedical Journal of Australia, 1
G. Saiz, K. Black, B. Reidy, S. Lopez, E. Farrell (2007)
Assessment of soil CO2 efflux and its components using a process-based model in a young temperate forest siteGeoderma, 139
Emmett Emmett, Beier Beier, Estiarte Estiarte (2004)
The response of soil processes to climate changeEcosystems, 7
K. Smalla, U. Wachtendorf, H. Heuer, Wen-Tso Liu, L. Forney (1998)
Analysis of BIOLOG GN Substrate Utilization Patterns by Microbial CommunitiesApplied and Environmental Microbiology, 64
Smith Smith, Ball Ball, Conen Conen, Dobbie Dobbie, Massheder Massheder, Rey Rey (2003)
Exchange of greenhouse gases between soil and atmosphereEuropean Journal of Soil Science, 54
(1998)
Signature lipid biomarker analysis
K. Nadelhoffer, A. Giblin, G. Shaver, J. Laundre (1991)
EFFECTS OF TEMPERATURE AND SUBSTRATE QUALITY ON ELEMENT MINERALIZATION IN SIX ARCTIC SOILSEcology, 72
J. Bauer, M. Herbst, J. Huisman, L. Weihermüller, H. Vereecken (2008)
Sensitivity of simulated soil heterotrophic respiration to temperature and moisture reduction functionsGeoderma, 145
J. Pietikäinen, M. Pettersson, E. Bååth (2005)
Comparison of temperature effects on soil respiration and bacterial and fungal growth rates.FEMS microbiology ecology, 52 1
Hana ŠANTRU˚CˇKOVÁ, M. Bird, Y. Kalaschnikov, Milan Grund, D. Elhottová, M. Šimek, S. Grigoryev, G. Gleixner, A. Arneth, E. Schulze, J. Lloyd (2003)
Microbial characteristics of soils on a latitudinal transect in SiberiaGlobal Change Biology, 9
M. Kirschbaum (2000)
Will changes in soil organic carbon act as a positive or negative feedback on global warming?Biogeochemistry, 48
Gu Gu, Post Post, King King (2004)
Fast labile carbon turnover obscures sensitivity of heterotrophic respiration from soil to temperatureGlobal Biogeochemical Cycles, 18
Y. Qi, Ming Xu, Jianguo Wu (2002)
Temperature sensitivity of soil respiration and its effects on ecosystem carbon budget: nonlinearity begets surprisesEcological Modelling, 153
N. Panikov (1999)
Understanding and prediction of soil microbial community dynamics under global changeApplied Soil Ecology, 11
H. Liu, Linghao Li, Xingguo Han, Jianhui Huang, Jian-xin Sun, Hong Wang (2006)
Respiratory substrate availability plays a crucial role in the response of soil respiration to environmental factorsApplied Soil Ecology, 32
Pendall Pendall, Rustad Rustad, Schimel Schimel (2008)
Towards a predictive understanding of belowground process responses to climate changeFunctional Ecology, 22
R. Hyvönen, G. Ågren, P. Dalias (2005)
Analysing temperature response of decomposition of organic matterGlobal Change Biology, 11
(1984)
Factors affecting cellulase activity in terrestrial and aquatic ecosystems
(1984)
Biostatistical Analysis
E. Pendall, S. Bridgham, P. Hanson, B. Hungate, D. Kicklighter, Dale Johnson, B. Law, Yiqi Luo, J. Megonigal, M. Olsrud, M. Ryan, S. Wan (2004)
Below-ground process responses to elevated CO2 and temperature: a discussion of observations, measurement methods, and modelsNew Phytologist, 162
B. Nicolardot, G. Fauvet, D. Chèneby (1994)
Carbon and nitrogen cycling through soil microbial biomass at various temperaturesSoil Biology & Biochemistry, 26
Pete Smith, Changming Fang, Julian Dawson, John Moncrieff (2008)
Impact of Global Warming on Soil Organic CarbonAdvances in Agronomy, 97
E. Jobbágy, R. Jackson (2000)
THE VERTICAL DISTRIBUTION OF SOIL ORGANIC CARBON AND ITS RELATION TO CLIMATE AND VEGETATIONEcological Applications, 10
G. Ågren, E. Bosatta (2002)
Reconciling differences in predictions of temperature response of soil organic matterSoil Biology & Biochemistry, 34
M. Beare (1997)
Fungal and Bacterial Pathways of Organic Matter Decomposition and Nitrogen Mineralization in Arable Soils
D. Zak, G. Kling (2006)
Microbial community composition and function across an arctic tundra landscape.Ecology, 87 7
L. Carpenter-Boggs, A. Kennedy, J. Reganold (1998)
Use of Phospholipid Fatty Acids and Carbon Source Utilization Patterns To Track Microbial Community Succession in Developing CompostApplied and Environmental Microbiology, 64
G. Zogg, D. Zak, D. Ringelberg, D. White, Neil MacDonald, K. Pregitzer (1997)
Compositional and functional shifts in microbial communities due to soil warmingSoil Science Society of America Journal, 61
S. Allison, J. Martiny (2008)
Resistance, resilience, and redundancy in microbial communitiesProceedings of the National Academy of Sciences, 105
A. Larionova, I. Yevdokimov, S. Bykhovets (2007)
Temperature response of soil respiration is dependent on concentration of readily decomposable CBiogeosciences, 4
R. Dahlgren, J. Boettinger, G. Huntington, R. Amundson (1997)
Soil development along an elevational transect in the western Sierra Nevada, CaliforniaGeoderma, 78
T. Müller, H. Höper (2004)
Soil organic matter turnover as a function of the soil clay content: consequences for model applicationsSoil Biology & Biochemistry, 36
D. Bossio, K. Scow (1998)
Impacts of Carbon and Flooding on Soil Microbial Communities: Phospholipid Fatty Acid Profiles and Substrate Utilization PatternsMicrobial Ecology, 35
Gillooly Gillooly, Brown Brown, West West, Savage Savage, Charnov Charnov (2001)
Effects of size and temperature on metabolic rateScience, 293
Å. Frostegård, A. Tunlid, E. Bååth (1993)
Phospholipid Fatty Acid Composition, Biomass, and Activity of Microbial Communities from Two Soil Types Experimentally Exposed to Different Heavy MetalsApplied and Environmental Microbiology, 59
E. Davidson, I. Janssens, Yiqi Luo (2006)
On the variability of respiration in terrestrial ecosystems: moving beyond Q10Global Change Biology, 12
E.-Detlef Schulze, A. Freibauer (2005)
Environmental science: Carbon unlocked from soilsNature, 437
F. Beinroth (1982)
Some highly weathered soils of Puerto Rico, 1. Morphology, formation and classificationGeoderma, 27
C. Fang, Pete Smith, J. Moncrieff, Jo Smith (2005)
Similar response of labile and resistant soil organic matter pools to changes in temperatureNature, 433
S. Manzoni, A. Porporato (2007)
A theoretical analysis of nonlinearities and feedbacks in soil carbon and nitrogen cyclesSoil Biology & Biochemistry, 39
T. Balser, A. Kinzig, M. Firestone (2002)
Linking Soil Microbial Communities and Ecosystem Functioning
N. Panikov, P. Flanagan, W. Oechel, M. Mastepanov, T. Christensen (2006)
Microbial activity in soils frozen to below −39 °CSoil Biology & Biochemistry, 38
C. Biasi, O. Rusalimova, H. Meyer, C. Kaiser, W. Wanek, P. Barsukov, H. Junger, Andreas Richter (2005)
Temperature-dependent shift from labile to recalcitrant carbon sources of arctic heterotrophs.Rapid communications in mass spectrometry : RCM, 19 11
Ise Ise, Moorcroft Moorcroft (2006)
The global‐scale temperature and moisture dependencies of soil organic carbon decompositionBiogeochemistry, 80
S. Kemmitt, C. Lanyon, I. Waite, Q. Wen, T. Addiscott, N. Bird, A. O'donnell, P. Brookes (2008)
Mineralization of native soil organic matter is not regulated by the size, activity or composition of the soil microbial biomass-a new perspectiveSoil Biology & Biochemistry, 40
E. Davidson, I. Janssens (2006)
Temperature sensitivity of soil carbon decomposition and feedbacks to climate changeNature, 440
Understanding the temperature sensitivity of soil respiration is critical for predicting the response of ecosystems to climate change, yet the microbial communities responsible are rarely considered explicitly in studies or models. In this study, we assessed total microbial community composition, quantified bacterial respiration temperature response, and investigated the temperature dependence of bacterial carbon substrate utilization in tropical, temperate, and taiga soils (from Puerto Rico, California, and Alaska). Microbial community composition was characterized using phospholipid fatty acid analysis. Bacterial community respiration on a standardized set of substrates was ascertained using the BiOLOG™ substrate utilization assay incubated at four temperatures: 4, 12, 28, and 40 °C. First, we found that microbial communities from the three latitudes were compositionally distinct and that the bacterial component of the three communities had markedly different respiration temperature–response curves corresponding with their experienced temperature regimes. We use these data to highlight limitations of widely used temperature–response equations and investigate temperature‐dependent patterns of substrate utilization. We found that temperature response, in terms of both respiration rates and substrate use, varied for these bacterial communities independent of substrate quality or quantity interactions such as labile depletion. In contrast to the common assumption of heterotrophic microbial ubiquity, we found that bacterial community differences from these diverse systems appeared to determine both rates of respiration and patterns of carbon substrate usage. We suggest that microbial community composition‐specific responses to changing climate may be important in predicting the long‐term role of ecosystems in atmospheric CO2 dynamics.
Global Change Biology – Wiley
Published: Dec 1, 2009
Read and print from thousands of top scholarly journals.
Already have an account? Log in
Bookmark this article. You can see your Bookmarks on your DeepDyve Library.
To save an article, log in first, or sign up for a DeepDyve account if you don’t already have one.
Copy and paste the desired citation format or use the link below to download a file formatted for EndNote
Access the full text.
Sign up today, get DeepDyve free for 14 days.
All DeepDyve websites use cookies to improve your online experience. They were placed on your computer when you launched this website. You can change your cookie settings through your browser.