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References (173)
-
Bernardo Arriaza, Wilmar Salo, A. Aufderheide, Todd Holcomb (1995)
Pre-Columbian tuberculosis in northern Chile: molecular and skeletal evidence.American journal of physical anthropology, 98 1
-
E. Willerslev, A. Hansen, Jonas Binladen, Tina Brand, M. Gilbert, B. Shapiro, M. Bunce, C. Wiuf, D. Gilichinsky, A. Cooper (2003)
Diverse Plant and Animal Genetic Records from Holocene and Pleistocene SedimentsScience, 300
-
S. Pääbo (1985)
Molecular cloning of Ancient Egyptian mummy DNANature, 314
-
D. Caramelli, C. Lalueza-Fox, C. Vernesi, Martina Lari, A. Casoli, F. Mallegni, B. Chiarelli, I. Dupanloup, J. Bertranpetit, G. Barbujani, G. Bertorelle (2003)
Evidence for a genetic discontinuity between Neandertals and 24,000-year-old anatomically modern EuropeansProceedings of the National Academy of Sciences of the United States of America, 100
-
C. Troy, D. MacHugh, J. Bailey, D. Magee, R. Loftus, P. Cunningham, A. Chamberlain, B. Sykes, D. Bradley (2001)
Genetic evidence for Near-Eastern origins of European cattleNature, 410
-
H. Poinar, M. Kuch, G. McDonald, P. Martin, S. Pääbo (2003)
Nuclear Gene Sequences from a Late Pleistocene Sloth CoproliteCurrent Biology, 13
-
M. Hofreiter, C. Capelli, M. Krings, L. Waits, N. Conard, Susanne Münzel, G. Rabeder, Doris Nagel, M. Paunović, G. Jambrĕsić, S. Meyer, G. Weiss, S. Pääbo (2002)
Ancient DNA analyses reveal high mitochondrial DNA sequence diversity and parallel morphological evolution of late pleistocene cave bears.Molecular biology and evolution, 19 8
-
E. Golenberg, D. Giannasi, M. Clegg, C. Smiley, M. Durbin, David Henderson, G. Zurawski (1990)
Chloroplast DNA sequence from a Miocene Magnolia speciesNature, 344
-
Michel Kohn, Robert Wayne (1997)
Facts from feces revisited.Trends in ecology & evolution, 12 6
-
I. Ovchinnikov, A. Götherström, G. Romanova, Vitaliy Kharitonov, K. Lidén, W. Goodwin (2000)
Molecular analysis of Neanderthal DNA from the northern CaucasusNature, 404
-
E. Friedberg, G. Walker, W. Siede (2006)
DNA Repair and Mutagenesis -
E. Paxinos, H. James, S. Olson, M. Sorenson, Jennifer Jackson, R. Fleischer (2002)
mtDNA from fossils reveals a radiation of Hawaiian geese recently derived from the Canada goose (Branta canadensis)Proceedings of the National Academy of Sciences of the United States of America, 99
-
P. Wandeler, S. Smith, P. Morin, R. Pettifor, S. Funk (2003)
Patterns of nuclear DNA degeneration over time — a case study in historic teeth samplesMolecular Ecology, 12
-
D. Lambert, P. Ritchie, C. Millar, B. Holland, A. Drummond, C. Baroni (2002)
Rates of Evolution in Ancient DNA from Adélie PenguinsScience, 295
-
M. Höss, P. Jaruga, T. Zastawny, M. Dizdaroglu, S. Pääbo (1996)
DNA damage and DNA sequence retrieval from ancient tissues.Nucleic acids research, 24 7
-
(2001)
A simple reason why Neanderthal ancestry can be consistent with current DNA information -
L. Huynen, C. Millar, R. Scofield, D. Lambert (2003)
Nuclear DNA sequences detect species limits in ancient moaNature, 425
-
C. Stringer (2002)
Modern human origins: progress and prospects.Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 357 1420
-
Y. Matsuoka, Y. Vigouroux, M. Goodman, J. G., E. Buckler, J. Doebley (2002)
A single domestication for maize shown by multilocus microsatellite genotypingProceedings of the National Academy of Sciences of the United States of America, 99
-
Richard Thomas, W. Schaffner, A. Wilson, S. Pääbo (1989)
DNA phylogeny of the extinct marsupial wolfNature, 340
-
R. Schmitz, D. Serre, G. Bonani, S. Feine, F. Hillgruber, Heike Krainitzki, S. Pääbo, F. Smith (2002)
The Neandertal type site revisited: Interdisciplinary investigations of skeletal remains from the Neander Valley, GermanyProceedings of the National Academy of Sciences of the United States of America, 99
-
M. Wolpoff, John Hawks, R. Caspari (2000)
Multiregional, not multiple origins.American journal of physical anthropology, 112 1
-
O. Handt, M. Krings, Ryk Ward, S. Pääbo (1996)
The retrieval of ancient human DNA sequences.American journal of human genetics, 59 2
-
P. Endicott, M. Gilbert, C. Stringer, C. Lalueza-Fox, E. Willerslev, A. Hansen, A. Cooper (2003)
The genetic origins of the Andaman Islanders.American journal of human genetics, 72 1
-
K. Padian (2000)
What the Media Don't Tell You About Evolution.Scientific American, 282
-
Albert Zink, W. Grabner, Udo Reischl, Hans Wolf, Andreas Nerlich (2003)
Molecular study on human tuberculosis in three geographically distinct and time delineated populations from ancient EgyptEpidemiology and Infection, 130
-
M. Hofreiter, H. Poinar, W. Spaulding, K. Bauer, P. Martin, G. Possnert, S. Pääbo (2000)
A molecular analysis of ground sloth diet through the last glaciationMolecular Ecology, 9
-
D. Serre, A. Langaney, Mario Chech, M. Teschler-Nicola, M. Paunović, P. Mennecier, M. Hofreiter, G. Possnert, S. Pääbo (2004)
No Evidence of Neandertal mtDNA Contribution to Early Modern HumansPLoS Biology, 2
-
Christian Haas, Albert Zink, Erika Molnár, Ulrike Szeimies, Udo Reischl, A. Marcsik, Y. Ardagna, Olivier Dutour, G. Pálfi, G. Pálfi, Andreas Nerlich (2000)
Molecular evidence for different stages of tuberculosis in ancient bone samples from Hungary.American journal of physical anthropology, 113 3
-
C. Vilà, P. Savolainen, J. Maldonado, I. Amorim, John Rice, R. Honeycutt, K. Crandall, J. Lundeberg, R. Wayne (1997)
Multiple and ancient origins of the domestic dog.Science, 276 5319
-
S. Pääbo, D. Irwin, A. Wilson (1990)
DNA damage promotes jumping between templates during enzymatic amplification.The Journal of biological chemistry, 265 8
-
Colin Smith, A. Chamberlain, M. Riley, C. Stringer, M. Collins (2003)
University of Birmingham The thermal history of human fossils and the likelihood of successful DNA amplification -
A. Sidow, A. Wilson, S. Pääbo (1991)
Bacterial DNA in Clarkia fossils.Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 333 1268
-
J. Burger, W. Rosendahl, O. Loreille, Helmut Hemmer, T. Eriksson, Anders Götherström, J. Hiller, Matthew Collins, T. Wess, K. Alt (2004)
Molecular phylogeny of the extinct cave lion Panthera leo spelaea.Molecular phylogenetics and evolution, 30 3
-
M. Collins, E. Waite, A. Duin (1999)
Predicting protein decomposition: the case of aspartic-acid racemization kinetics.Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 354 1379
-
Chinese Academy of Sciences, Beijing, People’s Republic of China. -
I. Barnes, P. Matheus, B. Shapiro, D. Jensen, Arthur Cooper (2002)
Dynamics of Pleistocene Population Extinctions in Beringian Brown BearsScience, 295
-
A. Reid, T. Fanning, J. Hultin, J. Taubenberger (1999)
Origin and evolution of the 1918 "Spanish" influenza virus hemagglutinin gene.Proceedings of the National Academy of Sciences of the United States of America, 96 4
-
A. Cooper, C. Lalueza-Fox, Simon Anderson, A. Rambaut, J. Austin, R. Ward (2001)
Complete mitochondrial genome sequences of two extinct moas clarify ratite evolutionNature, 409
-
S. Pääbo, A. Wilson (1988)
Polymerase chain reaction reveals cloning artefactsNature, 334
-
M. Krings, A. Stone, R. Schmitz, Heike Krainitzki, M. Stoneking, S. Pääbo (1997)
Neandertal DNA Sequences and the Origin of Modern HumansCell, 90
-
Matthias Hoss, S. Pāābo, N. Vereshchagin (1994)
Mammoth DNA sequencesNature, 370
-
C. Krajewski, L. Buckley, M. Westerman (1997)
DNA phylogeny of the marsupial wolf resolvedProceedings of the Royal Society of London. Series B: Biological Sciences, 264
-
Elizabeth Hadly, Michel Kohn, Jennifer Leonard, Robert Wayne (1998)
A genetic record of population isolation in pocket gophers during Holocene climatic change.Proceedings of the National Academy of Sciences of the United States of America, 95 12
-
P. Goloubinoff, S. Pääbo, A. Wilson (1993)
Evolution of maize inferred from sequence diversity of an Adh2 gene segment from archaeological specimens.Proceedings of the National Academy of Sciences of the United States of America, 90
-
Lori Andrews, Lori Andrews, N. Buenger, J. Bridge, L. Rosenow, D. Stoney, R. Gaensslen, Theodore Karamanski, Russell Lewis, Jordan Paradise, Amy Inlander, David Gonen, David Gonen (2004)
Constructing Ethical Guidelines for BiohistoryScience, 304
-
M. Bunce, T. Worthy, T. Ford, W. Hoppitt, E. Willerslev, A. Drummond, A. Cooper (2003)
Extreme reversed sexual size dimorphism in the extinct New Zealand moa DinornisNature, 425
-
C. Vilà, J. Leonard, A. Götherström, S. Marklund, K. Sandberg, K. Lidén, R. Wayne, H. Ellegren (2001)
Widespread origins of domestic horse lineages.Science, 291 5503
-
T. Watanobe, N. Ishiguro, N. Okumura, M. Nakano, A. Matsui, H. Hongo, H. Ushiro (2001)
Ancient Mitochondrial DNA Reveals the Origin of Sus scrofa from Rebun Island, JapanJournal of Molecular Evolution, 52
-
T. Lindahl, Olle Karlstrom (1973)
Heat-induced depyrimidination of deoxyribonucleic acid in neutral solution.Biochemistry, 12 25
-
R. Debruyne, V. Barriel, P. Tassy (2003)
Mitochondrial cytochrome b of the Lyakhov mammoth (Proboscidea, Mammalia): new data and phylogenetic analyses of Elephantidae.Molecular phylogenetics and evolution, 26 3
-
M. Krings, H. Geisert, R. Schmitz, Heike Krainitzki, S. Pääbo (1999)
DNA sequence of the mitochondrial hypervariable region II from the neandertal type specimen.Proceedings of the National Academy of Sciences of the United States of America, 96 10
-
Rong-Lin Wang, A. Stec, J. Hey, L. Lukens, J. Doebley (1999)
The limits of selection during maize domesticationNature, 398
-
H. Donoghue, M. Spigelman, J. Zias, A. Gernaey‐Child, D. Minnikin (1998)
Mycobacterium tuberculosis complex DNA in calcified pleura from remains 1400 years oldLetters in Applied Microbiology, 27
-
S. Whitt, Larissa Wilson, M. Tenaillon, B. Gaut, E. Buckler (2002)
Genetic diversity and selection in the maize starch pathwayProceedings of the National Academy of Sciences of the United States of America, 99
-
A. Kuyl, C. Kuiken, J. Dekker, W. Perizonius, J. Goudsmit (1995)
Nuclear counterparts of the cytoplasmic mitochondrial 12S rRNA gene: A problem of ancient DNA and molecular phylogeniesJournal of Molecular Evolution, 40
-
A. Suarez, N. Tsutsui (2004)
The Value of Museum Collections for Research and Society, 54
-
Russell Higuchi, Barbara Bowman, M. Freiberger, O. Ryder, A. Wilson (1984)
DNA sequences from the quagga, an extinct member of the horse familyNature, 312
-
M. Drancourt, G. Aboudharam, M. Signoli, O. Dutour, D. Raoult (1998)
Detection of 400-year-old Yersinia pestis DNA in human dental pulp: an approach to the diagnosis of ancient septicemia.Proceedings of the National Academy of Sciences of the United States of America, 95 21
-
A. Stone, M. Stoneking (1998)
mtDNA analysis of a prehistoric Oneota population: implications for the peopling of the New World.American journal of human genetics, 62 5
-
Matthias Höss, A. Dilling, Andrew Currant, S. Pääbo (1996)
Molecular phylogeny of the extinct ground sloth Mylodon darwinii.Proceedings of the National Academy of Sciences of the United States of America, 93 1
-
M. Gilbert, Jon Cuccui, W. White, N. Lynnerup, R. Titball, A. Cooper, M. Prentice (2004)
Absence of Yersinia pestis-specific DNA in human teeth from five European excavations of putative plague victims.Microbiology, 150 Pt 2
-
H. Fletcher, H. Donoghue, J. Holton, I. Pap, M. Spigelman (2003)
Widespread occurrence of Mycobacterium tuberculosis DNA from 18th-19th century Hungarians.American journal of physical anthropology, 120 2
-
Colin Smith, A. Chamberlain, M. Riley, A. Cooper, C. Stringer, M. Collins (2001)
Neanderthal DNA: Not just old but old and cold?Nature, 410
-
A. Greenwood, F. Lee, C. Capelli, R. DeSalle, A. Tikhonov, P. Marx, R. Macphee (2001)
Evolution of endogenous retrovirus-like elements of the woolly mammoth (Mammuthus primigenius) and its relatives.Molecular biology and evolution, 18 5
-
R. Cano, Monica Borucki (1995)
Revival and identification of bacterial spores in 25- to 40-million-year-old Dominican amber.Science, 268 5213
-
Anne Stone, M. Stoneking (1999)
Analysis of ancient DNA from a prehistoric Amerindian cemetery.Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 354 1379
-
Wilmar Salo, A. Aufderheide, J. Buikstra, Todd Holcomb (1994)
Identification of Mycobacterium tuberculosis DNA in a pre-Columbian Peruvian mummy.Proceedings of the National Academy of Sciences of the United States of America, 91 6
-
C. Krajewski, A. Driskell, P. Baverstock, M. Braun (1992)
Phylogenetic relationships of the thylacine (Mammalia: Thylacinidae) among dasyuroid marsupials : evidence from cytochrome b DNA sequencesProceedings of the Royal Society of London. Series B: Biological Sciences, 250
-
W. Thomas, S. Pääbo, Francis Villablanca, Allan Wilson (1990)
Spatial and temporal continuity of kangaroo rat populations shown by sequencing mitochondrial DNA from museum specimensJournal of Molecular Evolution, 31
-
C. Kolman, N. Tuross (2000)
Ancient DNA analysis of human populations.American journal of physical anthropology, 111 1
-
Albert Zink, Christian Haas, Udo Reischl, Ulrike Szeimies, Andreas Nerlich (2001)
Molecular analysis of skeletal tuberculosis in an ancient Egyptian population.Journal of medical microbiology, 50 4
-
S. Pääbo (1989)
Ancient DNA: extraction, characterization, molecular cloning, and enzymatic amplification.Proceedings of the National Academy of Sciences of the United States of America, 86 6
-
S. Pääbo (1990)
Amplifying ancient DNA -
C. Vernesi, Giulietta Benedetto, D. Caramelli, Erica Secchieri, Lucia Simoni, Emile Katti, P. Malaspina, A. Novelletto, Vito Marin, G. Barbujani (2001)
Genetic characterization of the body attributed to the evangelist LukeProceedings of the National Academy of Sciences of the United States of America, 98
-
M. Jobling (2001)
Near-Eastern origins of European cattleTrends in Genetics, 17
-
C. Stringer, P. Andrews (1988)
Genetic and fossil evidence for the origin of modern humans.Science, 239 4845
-
T. Watanobe, N. Ishiguro, M. Nakano, Hiroto Takamiya, A. Matsui, H. Hongo (2002)
Prehistoric Introduction of Domestic Pigs onto the Okinawa Islands: Ancient Mitochondrial DNA EvidenceJournal of Molecular Evolution, 55
-
P. Morin, Karen Chambers, C. Boesch, L. Vigilant (2001)
Quantitative polymerase chain reaction analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes verus)Molecular Ecology, 10
-
O. Handt, M. Höss, M. Krings, S. Pääbo (1994)
Ancient DNA: Methodological challengesExperientia, 50
-
L. Vigilant, M. Hofreiter, Heike Siedel, C. Boesch (2001)
Paternity and relatedness in wild chimpanzee communitiesProceedings of the National Academy of Sciences of the United States of America, 98
-
W. Navidi, N. Arnheim, M. Waterman (1992)
A multiple-tubes approach for accurate genotyping of very small DNA samples by using PCR: statistical considerations.American journal of human genetics, 50 2
-
A. Hansen, E. Willerslev, C. Wiuf, T. Mourier, P. Arctander (2001)
Statistical evidence for miscoding lesions in ancient DNA templates.Molecular biology and evolution, 18 2
-
Hendrik Poinar, B. Stankiewicz (1999)
Protein preservation and DNA retrieval from ancient tissues.Proceedings of the National Academy of Sciences of the United States of America, 96 15
-
Yong-Gang Yao, Q. Kong, X. Man, H. Bandelt, Ya-ping Zhang (2003)
Reconstructing the evolutionary history of China: a caveat about inferences drawn from ancient DNA.Molecular biology and evolution, 20 2
-
Hong Yang, E. Golenberg, J. Shoshani (1996)
Phylogenetic resolution within the Elephantidae using fossil DNA sequence from the American mastodon (Mammut americanum) as an outgroup.Proceedings of the National Academy of Sciences of the United States of America, 93 3
-
T. Ozawa, S. Hayashi, V. Mikhelson (1997)
Phylogenetic Position of Mammoth and Steller's Sea Cow Within Tethytheria Demonstrated by Mitochondrial DNA SequencesJournal of Molecular Evolution, 44
-
R. DeSalle, J. Gatesy, W. Wheeler, D. Grimaldi (1992)
DNA sequences from a fossil termite in Oligo-Miocene amber and their phylogenetic implications.Science, 257 5078
-
G. Logan, C. Smiley, G. Eglinton (1995)
Preservation of fossil leaf waxes in association with their source tissues, Clarkia, northern Idaho, USAGeochimica et Cosmochimica Acta, 59
-
M. Höss, M. Kohn, S. Pääbo, F. Knauer, W. Schröder (1992)
Excrement analysis by PCRNature, 359
-
L. Orlando, D. Bonjean, H. Bocherens, A. Thénot, A. Argant, M. Otte, C. Hänni (2002)
Ancient DNA and the population genetics of cave bears (Ursus spelaeus) through space and time.Molecular biology and evolution, 19 11
-
S. Woodward, N. Weyand, M. Bunnell (1994)
DNA sequence from Cretaceous period bone fragments.Science, 266 5188
-
C. Pertoldi, M. Hansen, V. Loeschcke, A. Madsen, L. Jacobsen, H. Baagøe (2001)
Genetic consequences of population decline in the European otter (Lutra lutra): an assessment of microsatellite DNA variation in Danish otters from 1883 to 1993Proceedings of the Royal Society of London. Series B: Biological Sciences, 268
-
(2001)
The Neandertal paradox -
D. Raoult, G. Aboudharam, É. Crubézy, G. Larrouy, B. Ludes, M. Drancourt (2000)
Molecular identification by "suicide PCR" of Yersinia pestis as the agent of medieval black death.Proceedings of the National Academy of Sciences of the United States of America, 97 23
-
G. Adcock, E. Dennis, S. Easteal, G. Huttley, L. Jermiin, W. Peacock, A. Thorne (2001)
Mitochondrial DNA sequences in ancient Australians: Implications for modern human origins.Proceedings of the National Academy of Sciences of the United States of America, 98 2
-
Christopher Hardy, C. Callou, J. Vigne, D. Casane, N. Dennebouy, J. Mounolou, M. Monnerot (1995)
Rabbit mitochondrial DNA diversity from prehistoric to modern timesJournal of Molecular Evolution, 40
-
A. Stone, M. Stoneking (1993)
Ancient DNA from a pre-Columbian Amerindian population.American journal of physical anthropology, 92 4
-
T. Lindahl, B. Nyberg (1972)
Rate of depurination of native deoxyribonucleic acid.Biochemistry, 11 19
-
C. Pusch, L. Bachmann (2004)
Spiking of contemporary human template DNA with ancient DNA extracts induces mutations under PCR and generates nonauthentic mitochondrial sequences.Molecular biology and evolution, 21 5
-
M. Hofreiter, V. Jaenicke, D. Serre, A. Haeseler, S. Pääbo (2001)
DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA.Nucleic acids research, 29 23
-
M. Krings, C. Capelli, F. Tschentscher, H. Geisert, S. Meyer, A. Haeseler, K. Grossschmidt, G. Possnert, M. Paunović, S. Pääbo (2000)
A view of Neandertal genetic diversityNature Genetics, 26
-
M. Noro, R. Masuda, Irena Dubrovo, M. Yoshida, Makoto Kato (1998)
Molecular Phylogenetic Inference of the Woolly Mammoth Mammuthus primigenius, Based on Complete Sequences of Mitochondrial Cytochrome b and 12S Ribosomal RNA GenesJournal of Molecular Evolution, 46
-
B. Stankiewicz, H. Poinar, D. Briggs, R. Evershed, G. Poinar (1998)
Chemical preservation of plants and insects in natural resinsProceedings of the Royal Society of London. Series B: Biological Sciences, 265
-
E. Willerslev, A. Hansen, H. Poinar (2004)
Isolation of nucleic acids and cultures from fossil ice and permafrost.Trends in ecology & evolution, 19 3
-
R. Vreeland, W. Rosenzweig, D. Powers (2000)
Isolation of a 250 million-year-old halotolerant bacterium from a primary salt crystalNature, 407
-
J. Timmis, M. Ayliffe, Chun-Yuan Huang, W. Martin (2004)
Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomesNature Reviews Genetics, 5
-
T. Lindahl (1993)
Recovery of antediluvian DNANature, 365
-
R. Cano, H. Poinar, N. Pieniązek, A. Acra, G. Poinar (1993)
Amplification and sequencing of DNA from a 120–135-million-year-old weevilNature, 363
-
J. Constable, J. Constable, Craig Packer, D. Collins, A. Pusey (1995)
Nuclear DNA from primate dungNature, 373
-
R. Saiki, D. Gelfand, S. Stoffel, S. Scharf, R. Higuchi, G. Horn, K. Mullis, H. Erlich (1988)
Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.Science, 239 4839
-
(2000)
The hybrid child from Portugal -
M. Hofreiter, G. Rabeder, V. Jaenicke-Després, Gerhard Withalm, Doris Nagel, M. Paunović, G. Jambrĕsić, S. Pääbo (2004)
Evidence for Reproductive Isolation between Cave Bear PopulationsCurrent Biology, 14
-
Martin Jones (2003)
Ancient DNA in pre-Columbian archaeology: a reviewJournal of Archaeological Science, 30
-
A. Greenwood, J. Castresana, G. Feldmaier-Fuchs, S. Pääbo (2001)
A molecular phylogeny of two extinct sloths.Molecular phylogenetics and evolution, 18 1
-
J. Leonard, R. Wayne, A. Cooper (2000)
Population genetics of ice age brown bears.Proceedings of the National Academy of Sciences of the United States of America, 97 4
-
Mark Thomas, E. Hagelberg, H. Jones, Ziheng Yang, A. Lister (2000)
Molecular and morphological evidence on the phylogeny of the ElephantidaeProceedings of the Royal Society of London. Series B: Biological Sciences, 267
-
H. Zischler, M. Höss, O. Handt, A. Haeseler, A. Kuyl, J. Goudsmit (1995)
Detecting dinosaur DNA.Science, 268 5214
-
P. Ritchie, C. Millar, G. Gibb, C. Baroni, D. Lambert (2003)
Ancient DNA enables timing of the pleistocene origin and holocene expansion of two adélie penguin lineages in antarctica.Molecular biology and evolution, 21 2
-
C. Hänni, Vincent Laudet, D. Stéhelin, P. Taberlet (1994)
Tracking the origins of the cave bear (Ursus spelaeus) by mitochondrial DNA sequencing.Proceedings of the National Academy of Sciences of the United States of America, 91 25
-
R. Shapiro (1981)
Damage to DNA Caused by Hydrolysis -
A. Cooper, H. Poinar (2000)
Ancient DNA: Do It Right or Not at AllScience, 289
-
M. Hofreiter, J. Betancourt, A. Sbriller, V. Markgraf, H. McDonald (2003)
Phylogeny, diet, and habitat of an extinct ground sloth from Cuchillo Curá, Neuquén Province, southwest ArgentinaQuaternary Research, 59
-
J. Hawks, M. Wolpoff (2001)
THE ACCRETION MODEL OF NEANDERTAL EVOLUTION, 55
-
R. Saiki, S. Scharf, F. Faloona, K. Mullis, G. Horn, H. Erlich, N. Arnheim (1985)
Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.Science, 230 4732
-
R. Schaaper, T. Kunkel, L. Loeb (1983)
Infidelity of DNA synthesis associated with bypass of apurinic sites.Proceedings of the National Academy of Sciences of the United States of America, 80 2
-
H. Poinar, M. Hofreiter, W. Spaulding, P. Martin, B. Stankiewicz, Helen Bland, R. Evershed, G. Possnert, S. Pääbo (1998)
Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis.Science, 281 5375
-
Craig Miller, L. Waits (2003)
The history of effective population size and genetic diversity in the Yellowstone grizzly (Ursus arctos): Implications for conservationProceedings of the National Academy of Sciences of the United States of America, 100
-
A. Cooper, CtCILE MOURER-CHAUVIRP, Geoffrey CHAMBERSt, A. von, Haeseler, A. Wilson, S. Pāābo (1992)
Independent origins of New Zealand moas and kiwis.Proceedings of the National Academy of Sciences of the United States of America, 89
-
M. Richards, B. Sykes, R. Hedges (1995)
Authenticating DNA Extracted From Ancient Skeletal RemainsJournal of Archaeological Science, 22
-
O. Haddrath, A. Baker (2001)
Complete mitochondrial DNA genome sequences of extinct birds: ratite phylogenetics and the vicariance biogeography hypothesis.Proceedings. Biological sciences, 268 1470
-
M.M.E. Jans, C. Nielsen-Marsh, Colin Smith, M. Collins, H. Kars (2004)
Characterisation of microbial attack on archaeological bone.Journal of Archaeological Science, 31
-
S. Fish, T. Shepherd, T. McGenity, W. Grant (2002)
Recovery of 16S ribosomal RNA gene fragments from ancient haliteNature, 417
-
M. Hale, P. Lurz, M. Shirley, S. Rushton, R. Fuller, K. Wolff (2001)
Impact of Landscape Management on the Genetic Structure of Red Squirrel PopulationsScience, 293
-
O. Loreille, L. Orlando, M. Patou-Mathis, Michel Philippe, P. Taberlet, C. Hänni (2001)
Ancient DNA analysis reveals divergence of the cave bear, Ursus spelaeus, and brown bear, Ursus arctos, lineagesCurrent Biology, 11
-
(2004)
D ow nl oa de d fr om w w w .a nn ua lr ev ie w s. or g by b -o n: U ni ve rs id ad e de L is bo a (U L -
M. Gilbert, E. Willerslev, Anders Hansen, I. Barnes, L. Rudbeck, N. Lynnerup, A. Cooper (2003)
Distribution patterns of postmortem damage in human mitochondrial DNA.American journal of human genetics, 72 1
-
P. Savolainen, Ya-ping Zhang, Jing Luo, J. Lundeberg, T. Leitner (2002)
Genetic Evidence for an East Asian Origin of Domestic DogsScience, 298
-
I. Colson, M. Richards, J. Bailey, B. Sykes, R. Hedges (1997)
DNA Analysis of Seven Human Skeletons Excavated from the Terp of WijnaldumJournal of Archaeological Science, 24
-
S. Pääbo, A. Wilson (1991)
Miocene DNA sequences — a dream come true?Current Biology, 1
-
H. Poinar, M. Kuch, K. Sobolik, I. Barnes, A. Stankiewicz, T. Kuder, W. Spaulding, V. Bryant, A. Cooper, S. Pääbo (2001)
A molecular analysis of dietary diversity for three archaic Native AmericansProceedings of the National Academy of Sciences of the United States of America, 98
-
G. Bar-Gal, Hamoudi Khalaily, O. Mader, Pierre Ducos, L. Horwitz (2002)
Ancient DNA Evidence for the Transition from Wild to Domestic Status in Neolithic Goats: A Case Study from the Site of Abu Gosh, IsraelAncient Biomolecules, 4
-
G. Eglinton, G. Logan, R. Ambler, J. Boon, W. Perizonius (1991)
Molecular preservation. DiscussionPhilosophical Transactions of the Royal Society B, 333
-
E. Willerslev, A. Hansen, R. Rønn, Tina Brand, I. Barnes, C. Wiuf, D. Gilichinsky, D. Mitchell, A. Cooper (2004)
Long-term persistence of bacterial DNACurrent Biology, 14
-
J. Bailey, M. Richards, V. Macaulay, I. Colson, Tim I, D. Bradley, R. Hedges, B. Sykes (1996)
Ancient DNA suggests a recent expansion of European cattle from a diverse wild progenitor speciesProceedings of the Royal Society of London. Series B: Biological Sciences, 263
-
M. Nordborg (1998)
On the probability of Neanderthal ancestry.American journal of human genetics, 63 4
-
Hiroki Oota, N. Saitou, T. Matsushita, S. Ueda (1995)
A genetic study of 2,000-year-old human remains from Japan using mitochondrial DNA sequences.American journal of physical anthropology, 98 2
-
M. Wolpoff, John Hawks, D. Frayer, Keith Hunley (2001)
Modern human ancestry at the peripheries: a test of the replacement theory.Science, 291 5502
-
J. Austin, A. Ross, A. Smith, R. Fortey, Richard Thomas (1997)
Problems of reproducibility – does geologically ancient DNA survive in amber–preserved insects?Proceedings of the Royal Society of London. Series B: Biological Sciences, 264
-
D. Serre, M. Hofreiter, S. Pääbo (2004)
Mutations induced by ancient DNA extracts?Molecular biology and evolution, 21 8
-
C. Hänni, A. Bègue, V. Laudet, D. Stéhelin, T. Brousseau, P. Amouyel, H. Duday (1995)
Molecular typing of neolithic human bonesJournal of Archaeological Science, 22
-
E. Hagelberg, Mark Thomas, C. Cook, A. Sher, G. Baryshnikov, A. Lister (1994)
DNA from ancient mammoth bonesNature, 370
-
T. Lindahl (1993)
Instability and decay of the primary structure of DNANature, 362
-
(2003)
erratum: Rapid change in mouse mitochondrial DNANature, 423
-
S. Wisely, S. Buskirk, M. Fleming, D. McDonald, E. Ostrander (2002)
Genetic diversity and fitness in black-footed ferrets before and during a bottleneck.The Journal of heredity, 93 4
-
H. Poinar, M. Höss, J. Bada, S. Pääbo (1996)
Amino Acid Racemization and the Preservation of Ancient DNAScience, 272
-
H. Koon, R.A Nicholson, M. Collins (2003)
A practical approach to the identification of low temperature heated bone using TEMJournal of Archaeological Science, 30
-
K. Thangaraj, L. Singh, A. Reddy, V. Rao, S. Sehgal, P. Underhill, Melanie Pierson, Ian Frame, E. Hagelberg (2003)
Genetic Affinities of the Andaman Islanders, a Vanishing Human PopulationCurrent Biology, 13
-
Cidália Duarte, João Maurício, Paul, B., Pettitt, P. Souto, E. Trinkaus, H. Plicht, J. Zilhão (1999)
The early Upper Paleolithic human skeleton from the Abrigo do Lagar Velho (Portugal) and modern human emergence in Iberia.Proceedings of the National Academy of Sciences of the United States of America, 96 13
-
Hiroki Oota, N. Saitou, T. Matsushita, S. Ueda (1999)
Molecular genetic analysis of remains of a 2,000-year-old human population in China-and its relevance for the origin of the modern Japanese population.American journal of human genetics, 64 1
-
I. Barnes, J.P.W Young, K. Dobney (2000)
DNA-based Identification of Goose Species from Two Archaeological Sites in LincolnshireJournal of Archaeological Science, 27
-
B. Luke, D. Hess, E. Oakeley, C. Wirbelauer, M. Blondel, M. Vigneron, Matthias Peter, W. Krek (2003)
Early Allelic Selection in Maize as Revealed by Ancient DNAScience, 302
-
S. Larson, R. Jameson, M. Etnier, M. Fleming, P. Bentzen (2002)
Loss of genetic diversity in sea otters (Enhydra lutris) associated with the fur trade of the 18th and 19th centuriesMolecular Ecology, 11
-
P. Soltis, D. Soltis, C. Smiley (1992)
An rbcL sequence from a Miocene Taxodium (bald cypress).Proceedings of the National Academy of Sciences of the United States of America, 89 1
-
O. Handt, Martin Richards, Marion Trommsdorff, C. Kilger, Jaana Simanainen, Oleg Georgiev, Karin Bauer, Anne Stone, Robert Hedges, Walter Schaffner, Gerd Utermann, B. Sykes, S. Pääbo (1994)
Molecular genetic analyses of the Tyrolean Ice Man.Science, 264 5166
-
H. Poinar, R. Cano, G. Poinar (1993)
DNA from an extinct plantNature, 363
-
O. Thalmann, Juliane Hebler, H. Poinar, S. Pääbo, L. Vigilant (2004)
Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apesMolecular Ecology, 13
-
D. Piperno, Kent Flannery (2001)
The earliest archaeological maize (Zea mays L.) from highland Mexico: new accelerator mass spectrometry dates and their implications.Proceedings of the National Academy of Sciences of the United States of America, 98 4
-
S. Vasan, Xin Zhang, Xini Zhang, A. Kapurniotu, J. Bernhagen, S. Teichberg, J. Basgen, D. Wagle, D. Shih, I. Terlecky, R. Bucala, A. Cerami, J. Egan, P. Ulrich (1996)
An agent cleaving glucose-derived protein crosslinks in vitro and in vivoNature, 382
-
J. Leonard, R. Wayne, Jane Wheeler, R. Valadez, Sonia Guillén, C. Vilà (2002)
Ancient DNA Evidence for Old World Origin of New World DogsScience, 298
-
(1999)
Nuclear DNA sequences from late Pleistocene megafauna.Molecular biology and evolution, 16 11
-
M. Gilbert, Anders Hansen, E. Willerslev, L. Rudbeck, I. Barnes, N. Lynnerup, A. Cooper (2003)
Characterization of genetic miscoding lesions caused by postmortem damage.American journal of human genetics, 72 1
-
C. Nielsen-Marsh, R. Hedges, T. Mann, M. Collins (2000)
A preliminary investigation of the application of differential scanning calorimetry to the study of collagen degradation in archaeological boneThermochimica Acta, 365
- Publisher
- Annual Reviews
- Copyright
- Copyright © 2004 by Annual Reviews. All rights reserved
- ISSN
- 0066-4197
- eISSN
- 1545-2948
- DOI
- 10.1146/annurev.genet.37.110801.143214
- pmid
- 15568989
- Publisher site
- See Article on Publisher Site
Abstract
▪ Abstract About 20 years ago, DNA sequences were separately described from the quagga (a type of zebra) and an ancient Egyptian individual. What made these DNA sequences exceptional was that they were derived from 140- and 2400-year-old specimens. However, ancient DNA research, defined broadly as the retrieval of DNA sequences from museum specimens, archaeological finds, fossil remains, and other unusual sources of DNA, only really became feasible with the advent of techniques for the enzymatic amplification of specific DNA sequences. Today, reports of analyses of specimens hundreds, thousands, and even millions of years old are almost commonplace. But can all these results be believed? In this paper, we critically assess the state of ancient DNA research. In particular, we discuss the precautions and criteria necessary to ascertain to the greatest extent possible that results represent authentic ancient DNA sequences. We also highlight some significant results and areas of promising future research.
Journal
Annual Review of Genetics – Annual Reviews
Published: Dec 15, 2004