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B. Owor, Dionne Shepherd, N. Taylor, R. Edema, A. Monjane, J. Thomson, D. Martin, A. Varsani (2007)
Successful application of FTA Classic Card technology and use of bacteriophage phi29 DNA polymerase for large-scale field sampling and cloning of complete maize streak virus genomes.Journal of virological methods, 140 1-2
Dionne Shepherd, A. Varsani, Oliver Windram, P. Lefeuvre, A. Monjane, B. Owor, D. Martin (2008)
Novel sugarcane streak and sugarcane streak Reunion mastreviruses from southern Africa and La RéunionArchives of Virology, 153
B. Owor, D. Martin, Dionne Shepherd, R. Edema, A. Monjane, E. Rybicki, J. Thomson, A. Varsani (2007)
Genetic analysis of maize streak virus isolates from Uganda reveals widespread distribution of a recombinant variant.The Journal of general virology, 88 Pt 11
D. Posada (2006)
ModelTest Server: a web-based tool for the statistical selection of models of nucleotide substitution onlineNucleic Acids Research, 34
K. Tamura, J. Dudley, M. Nei, Sudhir Kumar (2007)
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.Molecular biology and evolution, 24 8
C. Fenoll, J. Schwarz, D. Black, Michel Schneider, S. Howell (1990)
The intergenic region of maize streak virus contains a GC-rich element that activates rightward transcription and binds maize nuclear factorsPlant Molecular Biology, 15
L Bigarre, M Salah, M Granier, R Frutos, J-C Thouvenel, M Peterschmitt (1999)
Nucleotide sequence evidence for three distinct sugarcane streak mastrevirusesArch Virol, 144
C. Fenoll, D. Black, S. Howell (1988)
The intergenic region of maize streak virus contains promoter elements involved in rightward transcription of the viral genomeThe EMBO Journal, 7
E. Walt, D. Martin, A. Varsani, J. Polston, E. Rybicki (2008)
Experimental observations of rapid Maize streak virus evolution reveal a strand-specific nucleotide substitution biasVirology Journal, 5
M. Peterschmitt, B. Reynaud, G. Sommermeyer, P. Baudin (1991)
Characterization of maize streak virus isolates using monoclonal and polyclonal antibodies and by transmission to a few hosts.Plant Disease, 75
E. Pahlich, Chr. Gerlitz (1980)
A rapid DNA isolation procedure for small quantities of fresh leaf tissuePhytochemistry, 19
F. Hughes, E. Rybicki, R. Kirby (2005)
Complete nucleotide sequence of sugarcane streak MonogeminivirusArchives of Virology, 132
E. Walt, E. Rybicki, A. Varsani, J. Polston, Rosalind Billharz, L. Donaldson, A. Monjane, D. Martin (2009)
Rapid host adaptation by extensive recombinationThe Journal of General Virology, 90
G. Harkins, W. Delport, S. Duffy, N. Wood, A. Monjane, B. Owor, L. Donaldson, S. Saumtally, G. Triton, R. Briddon, Dionne Shepherd, E. Rybicki, D. Martin, A. Varsani (2009)
Experimental evidence indicating that mastreviruses probably did not co-diverge with their hostsVirology Journal, 6
(2005)
Ball LA (eds) Virus taxonomy (VIIIth Report of the ICTV)
J. Thompson, D. Higgins, T. Gibson (1994)
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.Nucleic acids research, 22 22
A. Varsani, Dionne Shepherd, A. Monjane, B. Owor, Julia Erdmann, E. Rybicki, M. Peterschmitt, Rob Briddon, P. Markham, S. Oluwafemi, Oliver Windram, P. Lefeuvre, J. Lett, D. Martin (2008)
Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogenThe Journal of General Virology, 89
D. Martin, C. Williamson, D. Posada (2005)
RDP2: recombination detection and analysis from sequence alignmentsBioinformatics, 21 2
M. Pinner, P. Markham (1990)
Serotyping and strain identification of maize streak virus isolates.The Journal of general virology, 71 ( Pt 8)
P. Lefeuvre, J. Lett, A. Varsani, A. Varsani, Darren Martin (2008)
Widely Conserved Recombination Patterns among Single-Stranded DNA VirusesJournal of Virology, 83
A. Varsani, S. Oluwafemi, Oliver Windram, Dionne Shepherd, A. Monjane, B. Owor, E. Rybicki, P. Lefeuvre, D. Martin (2008)
Panicum streak virus diversity is similar to that observed for maize streak virusArchives of Virology, 153
J Stanley, DM Bisaro, RW Briddon, JK Brown, CM Fauquet, BD Harrison, EP Rybicki, DC Stenger (2005)
Virus taxonomy (VIIIth Report of the ICTV)
T. Antwerpen, S. Mcfarlane, G. Buchanan, Dionne Shepherd, D. Martin, E. Rybicki, A. Varsani (2008)
First Report of Maize streak virus Field Infection of Sugarcane in South Africa.Plant disease, 92 6
S. Oluwafemi, A. Varsani, A. Monjane, Dionne Shepherd, B. Owor, E. Rybicki, D. Martin (2008)
A new African streak virus species from NigeriaArchives of Virology, 153
Stéphane Guindon, O. Gascuel (2003)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.Systematic biology, 52 5
The sugarcane-infecting streak viruses (SISVs) are a diverse collection of mastreviruses (family Geminiviridae ) within the African streak virus group. Four SISVs have currently been described, including the well-characterized maize streak virus. Here, we present a full annotated sequence record of an isolate of a new SISV species, Saccharum streak virus (SacSV), isolated in South Africa. The isolate shares less than 66% identity with any other mastrevirus, but is most closely related to Urochloa streak virus (USV), a mastrevirus from Nigeria that has until now been an outlier in the African streak virus phylogenetic tree. As with USV, the SacSV isolate we have characterized bears no obvious evidence of inter-species recombination.
Archives of Virology – Springer Journals
Published: Oct 1, 2009
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