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Electronic Reprint Biological Crystallography the Protein Data Bank Biological Crystallography the Protein Data Bank
Among the various databases dedicated to the identification of protein families and domains, PROSITE is the first one created and has continuously evolved since. PROSITE currently consists of a large collection of biologically meaningful motifs that are described as patterns or profiles, and linked to documentation briefly describing the protein family or domain they are designed to detect. The close relationship of PROSITE with the SWISS-PROT protein database allows the evaluation of the sensitivity and specificity of the PROSITE motifs and their periodic reviewing. In return, PROSITE is used to help annotate SWISS-PROT entries. The main characteristics and the techniques of family and domain identification used by PROSITE are reviewed in this paper. Key words pattern regular expression profile weight matrix database © Henry Stewart Publications « Previous | Next Article » Table of Contents This Article Brief Bioinform (2002) 3 (3): 265-274. doi: 10.1093/bib/3.3.265 This article appears in: InterPro » Abstract Free Full Text (PDF) Free Classifications Paper Services Article metrics Alert me when cited Alert me if corrected Find similar articles Similar articles in Web of Science Similar articles in PubMed Add to my archive Download citation Request Permissions Citing Articles Load citing article information Citing articles via CrossRef Citing articles via Scopus Citing articles via Web of Science Citing articles via Google Scholar Google Scholar Articles by Sigrist, C. J. A. Articles by Bucher, P. Search for related content PubMed PubMed citation Articles by Sigrist, C. J. A. Articles by Cerutti, L. Articles by Hulo, N. Articles by Gattiker, A. Articles by Falquet, L. Articles by Pagni, M. Articles by Bairoch, A. 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Briefings in Bioinformatics – Oxford University Press
Published: Sep 1, 2002
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