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Shusei Sato, S. Tabata, H. Hirakawa, E. Asamizu, K. Shirasawa, S. Isobe, T. Kaneko, Yasukazu Nakamura, D. Shibata, K. Aoki, M. Egholm, James Knight, R. Bogden, Changbao Li, Yang Shuang, Xun Xu, S. Pan, Shifeng Cheng, Xin Liu, Yuanyuan Ren, Jun Wang, A. Albiero, F. Pero, S. Todesco, J. Eck, Robert Buels, A. Bombarely, J. Gosselin, Minyun Huang, J. Leto, Naama Menda, S. Strickler, Linyong Mao, Shan Gao, I. Tecle, T. York, Yi Zheng, J. Vrebalov, Je Lee, S. Zhong, L. Mueller, W. Stiekema, Paolo Ribeca, T. Alioto, Wencai Yang, Sanwen Huang, Yong-chen Du, Zhonghua Zhang, Jianchang Gao, Yan-mei Guo, Xiaoxuan Wang, Ying Li, Jun He, Chuanyou Li, Zhukuan Cheng, Jianru Zuo, Jianfeng Ren, Jiuhai Zhao, Liuhua Yan, Hongling Jiang, Baoliang Wang, Hongshuang Li, Zhen-jun Li, F. Fu, Bingtang Chen, B. Han, Qi Feng, Danlin Fan, Ying Wang, H. Ling, Yongbiao Xue, D. Ware, W. McCombie, Z. Lippman, Jer-Ming Chia, K. Jiang, S. Pasternak, Laura Gelley, M. Kramer, L. Anderson, Song-Bin Chang, S. Royer, L. Shearer, S. Stack, J. Rose, Yimin Xu, N. Eannetta, A. Matas, R. McQuinn, S. Tanksley, F. Camara, R. Guigó, S. Rombauts, Jeffrey Fawcett, Y. Peer, D. Zamir, Chunbo Liang, M. Spannagl, H. Gundlach, R. Bruggmann, K. Mayer, Zhiqi Jia, Junhong Zhang, Z. Ye, G. Bishop, S. Butcher, Rosa Lopez-Cobollo, Daniel Buchan, Ioannis Filippis, J. Abbott, Rekha Dixit, Manju Singh, Archana Singh, J. Pal, A. Pandit, Pradeep Singh, A. Mahato, V. Dogra, K. Gaikwad, T. Sharma, T. Mohapatra, N. Singh, M. Causse, C. Rothan, T. Schiex, Céline Noirot, A. Bellec, C. Klopp, C. Delalande, H. Bergès, J. Mariette, P. Frasse, S. Vautrin, M. Zouine, A. Latché, C. Rousseau, F. Regad, J. Pech, Murielle Philippot, M. Bouzayen, Pierre Pericard, Sonia Osorio, A. Carmen, A. Monforte, A. Granell, R. Fernández-Muñoz, Mariana Conte, G. Lichtenstein, F. Carrari, G. Bellis, F. Fuligni, C. Peano, S. Grandillo, Pasquale Termolino, M. Pietrella, Elio Fantini, G. Falcone, A. Fiore, G. Giuliano, L. Lopez, Paolo Facella, G. Perrotta, Loretta Daddiego, G. Bryan, M. Orozco, X. Pastor, D. Torrents, Keygene Schriek, R. Feron, Jan Oeveren, P. Heer, Lorena daPonte, Saskia Jacobs-Oomen, M. Cariaso, M. Prins, M. Eijk, A. Janssen, M. Haaren, Sung-Hwan Jo, Jungeun Kim, Suk-Yoon. Kwon, Sangmi Kim, D. Koo, Sanghyeob Lee, Cheol-Goo Hur, Chris Clouser, A. Rico, A. Hallab, C. Gebhardt, K. Klee, Anika Joecker, J. Warfsmann, U. Goebel, S. Kawamura, K. Yano, J. Sherman, H. Fukuoka, Satomi Negoro, Sarita Bhutty, Parul Chowdhury, D. Chattopadhyay, E. Datema, S. Smit, E. Schijlen, J. Belt, J. Haarst, S. Peters, M. Staveren, M. Henkens, P. Mooyman, T. Hesselink, R. Ham, Guoyong Jiang, M. Droege, D. Choi, B. Kang, Byung-Dong Kim, Minkyu Park, Seungill Kim, Seon-In Yeom, Yong-Hwan Lee, Y. Choi, Guangcun Li, Jianwei Gao, Yongsheng Liu, Shengxiong Huang, V. Fernández-Pedrosa, Carmen Collado, S. Zuniga, Guoping Wang, R. Cade, R. Dietrich, J. Rogers, S. Knapp, Z. Fei, Ruth White, T. Thannhauser, J. Giovannoni, M. Botella, Louise Gilbert, R. González, J. Goicoechea, Yeisoo Yu, D. Kudrna, K. Collura, Marina Wissotski, R. Wing, H. Schoof, B. Meyers, Aishwarya Gurazada, P. Green, S. Mathur, S. Vyas, A. Solanke, Rahul Kumar, Vikrant Gupta, A. Sharma, P. Khurana, J. Khurana, A. Tyagi, T. Dalmay, I. Mohorianu, Brandon Walts, S. Chamala, W. Barbazuk, Jingping Li, Hui Guo, Tae-Ho Lee, Yupeng Wang, Dong Zhang, A. Paterson, Xiyin Wang, Haibao Tang, A. Barone, M. Chiusano, M. Ercolano, N. D’Agostino, M. Filippo, Alessandra Traini, W. Sanseverino, L. Frusciante, G. Seymour, Mounir Elharam, Ying Fu, A. Hua, S. Kenton, J. Lewis, S. Lin, F. Najar, H. Lai, B. Qin, Chunmei Qu, Ruihua Shi, Doug White, James White, Yanbo Xing, Keqin Yang, Jing Yi, Ziyun Yao, Liping Zhou, B. Roe, A. Vezzi, M. Dangelo, R. Zimbello, Riccardo Schiavon, E. Caniato, Chiara Rigobello, D. Campagna, N. Vitulo, G. Valle, D. Nelson, E. Paoli, D. Szinay, H. Jong, Yuling Bai, R. Visser, R. Lankhorst, H. Beasley, K. McLaren, C. Nicholson, C. Riddle, G. Gianese (2012)
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Genome evolution rates can vary considerably among plants. In particular, a correlation has often been reported between the evolution rate and annual/perennial habit, possibly associated with differences in generation time. For example, among the rosid species whose genome is fully sequenced, Vitis vinifera, a perennial species, was shown to have the genome that evolved the slowest. In order to extend knowledge of evolution rates to the asterid clade, one of the two major clades of core eudicotyledonous, the protein evolution rates in three asterid species, one perennial (Coffea canephora) and two annual species (Solanum lycopersicum and Mimulus guttatus), were investigated and compared with V. vinifera. Significant differences were observed among these species, and the proteins that evolved the most slowly were those of V. vinifera. Among the species belonging to the asterid clade, C. canephora appears to have evolved more slowly than the others. These findings are consistent with a correlation between perennial habit and slow evolution rates. The C. canephora genome seems to be an appropriate model for paleogenomic studies of asterids.
Journal of Heredity – Oxford University Press
Published: Apr 17, 2013
Keywords: Key words: asterids coffea comparative evolution core eudicots protein distances rosids
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