-
Jacobo
Zuñiga-Castillo,
D.
Romero,
J.
Martínez-Salazar
(2004)
The Recombination Genes addAB Are Not Restricted to Gram-Positive Bacteria: Genetic Analysis of the Recombination Initiation Enzymes RecF and AddAB in Rhizobium etli
Journal of Bacteriology, 186
-
F.
Capaldo,
G.
Ramsey,
S.
Barbour
(1974)
Analysis of the Growth of Recombination-Deficient Strains of Escherichia coli K-12
Journal of Bacteriology, 118
-
E.
Rocha,
E.
Cornet,
B.
Michel
(2005)
Comparative and Evolutionary Analysis of the Bacterial Homologous Recombination Systems
PLoS Genetics, 1
-
K.
Katoh,
K.
Misawa,
K.
Kuma,
T.
Miyata
(2002)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.
Nucleic acids research, 30 14
-
L.
Aravind,
R.
Tatusov,
Y.
Wolf,
D.
Walker,
E.
Koonin
(1998)
Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles.
Trends in genetics : TIG, 14 11
-
S.
Amundsen,
J.
Fero,
L.
Hansen,
G.
Cromie,
J.
Solnick,
Gerald
Smith,
N.
Salama
(2008)
Helicobacter pylori AddAB helicase‐nuclease and RecA promote recombination‐related DNA repair and survival during stomach colonization
Molecular Microbiology, 69
-
S.
Marsin,
A.
Mathieu,
T.
Kortulewski,
R.
Guérois,
J.
Radicella
(2008)
Unveiling Novel RecO Distant Orthologues Involved in Homologous Recombination
PLoS Genetics, 4
-
K.
Tamura,
J.
Dudley,
M.
Nei,
Sudhir
Kumar
(2007)
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
Molecular biology and evolution, 24 8
-
S.
Amundsen,
Gerald
Smith
(2003)
Interchangeable Parts of the Escherichia coli Recombination Machinery
Cell, 112
-
S.
Kowalczykowski
(2000)
Initiation of genetic recombination and recombination-dependent replication.
Trends in biochemical sciences, 25 4
-
M.
Singleton,
M.
Dillingham,
M.
Gaudier,
S.
Kowalczykowski,
D.
Wigley
(2004)
Crystal structure of RecBCD enzyme reveals a machine for processing DNA breaks
Nature, 432
-
K.
Nelson,
R.
Clayton,
S.
Gill,
M.
Gwinn,
R.
Dodson,
D.
Haft,
E.
Hickey,
J.
Peterson,
W.
Nelson,
K.
Ketchum,
L.
McDonald,
T.
Utterback,
J.
Malek,
K.
Linher,
Mina
Garrett,
Ashley
Stewart,
M.
Cotton,
M.
Pratt,
C.
Phillips,
D.
Richardson,
J.
Heidelberg,
G.
Sutton,
R.
Fleischmann,
J.
Eisen,
O.
White,
S.
Salzberg,
Hamilton
Smith,
J.
Venter,
C.
Fraser
(1999)
Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima
Nature, 399
-
J.
Alonso,
A.
Stiege,
G.
Lüder
(1993)
Genetic recombination in Bacillus subtilis 168: effect of recN, recF, recH and addAB mutations on DNA repair and recombination
Molecular and General Genetics MGG, 239
-
Indranil
Biswas,
Emmanuelle
Maguin,
S.
Ehrlich,
Alexandra
Gruss
(1995)
A 7-base-pair sequence protects DNA from exonucleolytic degradation in Lactococcus lactis.
Proceedings of the National Academy of Sciences of the United States of America, 92 6
-
Gerald
Smith
(2001)
Homologous recombination near and far from DNA breaks: alternative roles and contrasting views.
Annual review of genetics, 35
-
D.
Cano,
M.
Pucciarelli,
F.
Portillo,
J.
Casadesús
(2002)
Role of the RecBCD Recombination Pathway in Salmonella Virulence
Journal of Bacteriology, 184
-
D.
Schultz,
A.
Taylor,
G.
Smith
(1983)
Escherichia coli RecBC pseudorevertants lacking chi recombinational hotspot activity
Journal of Bacteriology, 155
-
B.
Haijema,
Gerhardus
Venema,
J.
Kooistra
(1996)
The C terminus of the AddA subunit of the Bacillus subtilis ATP-dependent DNase is required for the ATP-dependent exonuclease activity but not for the helicase activity
Journal of Bacteriology, 178
-
Donald
Oliver,
Edward
Goldberg
(1977)
Protection of parental T4 DNA from a restriction exonuclease by the product of gene 2.
Journal of molecular biology, 116 4
-
J.
Kooistra,
B.
Haijema,
Anne
Hesseling‐Meinders,
G.
Venemâ
(1997)
A conserved helicase motif of the AddA subunit of the Bacillus subtilis ATP‐dependent nuclease (AddAB) is essential for DNA repair and recombination
Molecular Microbiology, 23
-
Francisco
Silva,
A.
Latorre,
A.
Moya
(2003)
Why are the genomes of endosymbiotic bacteria so stable?
Trends in genetics : TIG, 19 4
-
Joseph
Yeeles,
M.
Dillingham
(2007)
A dual-nuclease mechanism for DNA break processing by AddAB-type helicase-nucleases.
Journal of molecular biology, 371 1
-
F.
Ciccarelli,
T.
Doerks,
C.
Mering,
C.
Creevey,
B.
Snel,
P.
Bork
(2006)
Toward Automatic Reconstruction of a Highly Resolved Tree of Life
Science, 311
-
R.
Gil,
Francisco
Silva,
E.
Zientz,
F.
Delmotte,
F.
González-Candelas,
A.
Latorre,
C.
Rausell,
J.
Kamerbeek,
J.
Gadau,
B.
Hölldobler,
R.
Ham,
R.
Gross,
A.
Moya
(2003)
The genome sequence of Blochmannia floridanus: Comparative analysis of reduced genomes
Proceedings of the National Academy of Sciences of the United States of America, 100
-
Andrew
Taylor,
Gerald
Smith
(2003)
RecBCD enzyme is a DNA helicase with fast and slow motors of opposite polarity
Nature, 423
-
Silvia
Fernández,
S.
Ayora,
Juan
Alonso
(2000)
Bacillus subtilis homologous recombination: genes and products.
Research in microbiology, 151 6
-
D.
Faguy,
W.
Doolittle
(2000)
Horizontal transfer of catalase-peroxidase genes between archaea and pathogenic bacteria.
Trends in genetics : TIG, 16 5
-
Daniel
Anderson,
S.
Kowalczykowski
(1997)
The Translocating RecBCD Enzyme Stimulates Recombination by Directing RecA Protein onto ssDNA in a χ-Regulated Manner
Cell, 90
-
S.
Amundsen,
A.
Taylor,
A.
Chaudhury,
G.
Smith
(1986)
recD: the gene for an essential third subunit of exonuclease V.
Proceedings of the National Academy of Sciences of the United States of America, 83 15
-
E.
Koonin,
Y.
Wolf
(2008)
Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world
Nucleic Acids Research, 36
-
H.
Sánchez,
D.
Kidane,
Patricia
Reed,
Fiona
Curtis,
M.
Cozar,
Peter
Graumann,
Peter
Graumann,
G.
Sharples,
J.
Alonso
(2005)
The RuvAB Branch Migration Translocase and RecU Holliday Junction Resolvase Are Required for Double-Stranded DNA Break Repair in Bacillus subtilis
Genetics, 171
-
I.
Tamas,
Lisa
Klasson,
Björn
Canbäck,
A.
Näslund,
A.
Eriksson,
J.
Wernegreen,
J.
Sandström,
N.
Moran,
S.
Andersson
(2002)
50 Million Years of Genomic Stasis in Endosymbiotic Bacteria
Science, 296
-
F.
Chédin,
P.
Noirot,
V.
Biaudet,
S.
Ehrlich
(1998)
A five‐nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis
Molecular Microbiology, 29
-
J.
Kooistra,
G.
Venema
(1991)
Cloning, sequencing, and expression of Bacillus subtilis genes involved in ATP-dependent nuclease synthesis
Journal of Bacteriology, 173
-
J.
Lawrence
(1997)
Selfish operons and speciation by gene transfer.
Trends in microbiology, 5 9
-
J.
Thompson,
F.
Plewniak,
O.
Poch
(1999)
A comprehensive comparison of multiple sequence alignment programs
Nucleic acids research, 27 13
-
T.
Cavalier-smith
(2006)
Rooting the tree of life by transition analyses
Biology Direct, 1
-
A.
Waterhouse,
J.
Procter,
David
Martin,
M.
Clamp,
G.
Barton
(2009)
Jalview Version 2—a multiple sequence alignment editor and analysis workbench
Bioinformatics, 25
-
D.
Halpern,
A.
Gruss,
J.
Claverys,
Meriem
El-Karoui
(2004)
rexAB mutants in Streptococcus pneumoniae.
Microbiology, 150 Pt 7
-
F.
Chédin,
S.
Kowalczykowski
(2002)
A novel family of regulated helicases/nucleases from Gram‐positive bacteria: insights into the initiation of DNA recombination
Molecular Microbiology, 43
-
E.
Koonin,
A.
Mushegian,
P.
Bork
(1996)
Non-orthologous gene displacement.
Trends in genetics : TIG, 12 9
-
Ge
Wang,
R.
Maier
(2008)
A RecB-Like Helicase in Helicobacter pylori Is Important for DNA Repair and Host Colonization
Infection and Immunity, 77
-
Jianlei
Wang,
D.
Julin
(2004)
DNA Helicase Activity of the RecD Protein from Deinococcus radiodurans*
Journal of Biological Chemistry, 279
-
Stéphane
Guindon,
O.
Gascuel
(2003)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.
Systematic biology, 52 5