TY - JOUR
AU1 - Mora-Márquez, Fernando
AU2 - Vázquez-Poletti, José Luis
AU3 - López de Heredia, Unai
AB - SummaryRNA-seq analysis usually requires large computing infrastructures. NGScloud is a bioinformatic system developed to analyze RNA-seq data using the cloud computing services of Amazon that permit the access to ad hoc computing infrastructure scaled according to the complexity of the experiment, so its costs and times can be optimized. The application provides a user-friendly front-end to operate Amazon’s hardware resources, and to control a workflow of RNA-seq analysis oriented to non-model species, incorporating the cluster concept, which allows parallel runs of common RNA-seq analysis programs in several virtual machines for faster analysis.Availability and implementationNGScloud is freely available at https://github.com/GGFHF/NGScloud/. A manual detailing installation and how-to-use instructions is available with the distribution.
TI - NGScloud: RNA-seq analysis of non-model species using cloud computing
JF - Bioinformatics
DO - 10.1093/bioinformatics/bty363
DA - 2018-05-03
UR - https://www.deepdyve.com/lp/oxford-university-press/ngscloud-rna-seq-analysis-of-non-model-species-using-cloud-computing-U0JxXv0uB4
SP - 3405
EP - 3407
VL - 34
IS - 19
DP - DeepDyve
ER -