TY - JOUR
AU1 - Larsen, Lars Allan
AU2 - Jespersgaard, Cathrine
AU3 - Andersen, Paal Skytt
AB - This protocol describes capillary array electrophoresis single-strand conformation polymorphism (CAE-SSCP), a screening method for detection of unknown and previously identified mutations. The method detects 98% of mutations in a sample material and can be applied to any organism where the goal is to determine genetic variation. This protocol describes how to screen for mutations in 192 singleplex or up to 768 multiplex samples over 3 days. The protocol is based on the principle of sequence-specific mobility of single-stranded DNA in a native polymer, and covers all stages in the procedure, from initial DNA purification to final CAE-SSCP data analysis, as follows: DNA is purified, followed by PCR amplification using fluorescent primers. After PCR amplification, double-stranded DNA is heat-denatured to separate the strands and subsequently cooled on ice to avoid reannealing. Finally, samples are analyzed by capillary electrophoresis and appropriate analysis software.
TI - Single-strand conformation polymorphism analysis using capillary array electrophoresis for large-scale mutation detection
JF - Nature Protocols
DO - 10.1038/nprot.2007.200
DA - 2007-06-14
UR - https://www.deepdyve.com/lp/springer-journals/single-strand-conformation-polymorphism-analysis-using-capillary-array-9vts0OL3WM
SP - 1458
EP - 1466
VL - 2
IS - 6
DP - DeepDyve
ER -