Phylogenetic relationships of the Chinese sisorid catfishes: a nuclear intron versus mitochondrial gene approachGuo, Xianguang; He, Shunping; Zhang, Yaoguang
doi: 10.1007/s10750-006-0369-8pmid: N/A
Several recent molecular phylogenetic studies of the sisorid catfishes (Sisoridae) have challenged some aspects of their traditional taxonomy and cladistic hypotheses of their phylogeny. However, disagreement with respect to relationships within this family in these studies highlights the need for additional data and analyses. Here we subjected 15 taxa representing 12 sisorids genera to comprehensive phylogenetic analyses using the second intron of low-copy nuclear S7 ribosomal protein (rpS7) gene and the mitochondrial 16S rRNA gene segments both individually and in combination. The competing sisorid topologies were then tested by using the approximately unbiased (AU) test and the Shimodaira–Hasegawa (SH) test. Our results support previously suggested polyphyly of Pareuchiloglanis. The genus Pseudecheneis is likely to be nested in the glyptosternoids and Glaridoglanis might be basal to the tribe Glyptosternini. However, justified by AU and SH test, the sister-group relationship between Pseudecheneis and the monophyletic glyptosternoids cannot be rejected based on the second intron of rpS7 gene and combined data analyses. It follows that both gene segments are not suitable for resolving the phylogenetic relationships within the sisorid catfishes. Overall, the second intron of rpS7 gene yielded poor phylogenetic performance when compared to 16S rRNA gene, the evolutionary hypothesis of which virtually agreed with the combined data analyses tree. This phenomenon can be explained by the insufficient length and fast saturation of substitutions in the second intron of rpS7 gene, due to substitution patterns such as frequent indels (insertion/deletion events) of bases in the sequences during the evolution.
The composition and importance of the phytoneuston in two floodplain lakes in south-eastern AustraliaButler, Jessica; Croome, Roger; Rees, Gavin
doi: 10.1007/s10750-006-0397-4pmid: N/A
Normans Lagoon and 3-Gum pond are small floodplain water bodies adjacent to the Murray River, south-eastern Australia, and often have a visible film/sheen across their surface. Since few studies have provided quantitative comparisons of the surface and subsurface layer communities of shallow freshwater lakes, we determined the contributions of the surface and subsurface populations to overall algal biomass when a surface film was visible, and when it was not visible. We examined the algae and cyanobacteria present at the air–water interface of each water body, and compared the findings with those for the water immediately below the surface, and for the overall water column. The algal groupings Trachelomonas spp., other Euglenophyceae (principally Euglena spp.), Chlorophyceae and Cyanobacteria usually comprised >95% of the measured biovolume within all samples. Samples from the air–water interface were considerably enriched (up to 200-fold) with respect to algal biovolume, whether or not a visible surface film was present, and elevated cell counts were observed within the air–water interface for motile organisms such as Trachelomonas spp. and green unicellular flagellates. The reverse was true for the cyanobacterium Planktolyngbya however, with greater concentrations occurring at depth. In terms of its contribution to the overall algal/cyanobacterial populations within each water body, the surface layer was found to be responsible for <1–20% of the biovolume over the entire water column. Multivariate statistical analysis confirmed there were significant differences between the communities of the air–water interface and those of the water below, and that these differences occurred both in the presence and absence of a visible surface film/sheen.
Changes in trophic linkages to shortfin eels (Anguilla australis) since the collapse of submerged macrophytes in Lake Ellesmere, New ZealandKelly, David; Jellyman, Don
doi: 10.1007/s10750-006-0400-0pmid: N/A
Lake Ellesmere (Te Waihora) is a nationally important coastal brackish lake in New Zealand, however degradation in water quality and loss of submerged macrophytes over past decades have raised concerns in regards to the declining status of the lake’s commercial and customary fisheries, predominantly targeted at shortfin eels (Anguilla australis). We investigated foodweb dynamics and trophic linkages to shortfin eels in Lake Ellesmere using a combination of abundance assessments, dietary studies, and stable isotope analyses. Data from our study are compared with historical data sets on benthic invertebrate community composition and shortfin eel diets to trace changes in the trophic linkages to top predators that have occurred since the late 1960s. Stable isotope analyses indicate that the foodweb is predominantly driven by epipelic and phytoplankton derived carbon sources, although it was difficult to discriminate between these two carbon pools because of wind-driven resuspension of lake sediments. Comparison of our survey results with historical data sets indicates a clear shift in benthic biota from being dominated by phytofaunal species such as Potamopyrgus antipodarum (comprising 90% of total invertebrate biomass) during the 1960s, to now being almost entirely comprised of subterranean species such as Chironomus zealandicus and oligochaetes (together comprising 82% of total invertebrate biomass). This shift in benthic communities has resulted in significant changes in the size-specific diet of juvenile shortfin eels (<400 mm) from those reported for Lake Ellesmere during the mid 1970s, with Chironomus larvae now comprising 65% of the diets of juvenile eels, whereas historically P. antipodarum was the dominant food item (>30% of total biomass). This shift towards foraging on smaller sediment-dwelling species could have implications for juvenile eel bioenergetics, and may help explain why juvenile shortfin growth rates have significantly decreased in past decades. Juvenile shortfins now appear to switch to foraging on preyfish (mainly common bullies, Gobiomorphus cotidianus) at a smaller size (≈400 mm) than historically recorded (>500 mm). Dietary and stable isotope signatures indicated that small shortfins (100–299 mm) have considerable overlap in trophic position (δ13C = −20.4‰, δ15N = 13.6‰) with common bullies (δ13C = −20.5‰, δ15N = 13.7‰), the dominant fish in Lake Ellesmere (92% of total abundance CPUE), potentially indicating that these two species may directly compete for food resources. These findings again highlighted the importance of C. zealandicus in sustaining the fish populations of the lake.
Physiological responses induced by copper bioaccumulation in Eichhornia crassipes (Mart.)Hu, Chaohua; Zhang, Lei; Hamilton, David; Zhou, Wenbing; Yang, Tewu; Zhu, Duanwei
doi: 10.1007/s10750-006-0404-9pmid: N/A
Eichhornia crassipes (Mart.) has strong ability to remove Cu2+ from copper-contaminated water. Physiological responses in E. crassipes exposed to known concentrations of Cu2+ were examined in this study, and demonstrated that E. crassipes could accumulate 314 mg kg−1 dry weight of Cu when exposed to 5 mg l−1 of Cu2+ for periods up to 14 d. However, there were marked changes in physiology of the plant commencing at Cu2+ concentrations of 1 mg l−1. Results of this study showed that E. crassipes could tolerate moderate concentrations (i.e. 0.5 mg l−1) of Cu2+, without significant changes in photosynthetic pigment concentrations, while high concentrations (i.e. 5 and 10 mg l−1) of Cu2+ resulted in substantial loss in pigment concentrations. Increases in malondiadehyde (MDA) content were also demonstrated in plant exposure to high Cu2+ concentrations. Soluble protein content increased to a level slightly higher than the control at <0.5 mg l−1 of Cu2+, but then decreased with exposure to >1 mg l−1 of Cu2+. Our results suggest that E. crassipes has a substantial capacity to accumulate copper when cultivated at moderate concentrations of Cu2+, without marked changes in its physiology. The findings indicate that E. crassipes is a promising possibility for phytoremediation of moderately Cu-contaminated water bodies.
Testing the generality of the trophic cascade paradigm for sea otters: a case study with kelp forests in northern Washington, USACarter, Sarah; VanBlaricom, Glenn; Allen, Brian
doi: 10.1007/s10750-006-0403-xpmid: N/A
Trophic cascade hypotheses for biological communities, linking predation by upper trophic levels to major features of ecological structure and dynamics at lower trophic levels, are widely subscribed and may influence conservation policy. Few such hypotheses have been evaluated for temporal or spatial generality. Previous studies of sea otter (Enhydra lutris) predation along the outer coast of North America suggest a pattern, often elevated to the status of paradigm, in which sea otter presence leads to reduced sea urchin (Strongylocentrotus spp.) biomass and rapid increases in abundance and diversity of annual algal species, followed by a decline in diversity as one or a few perennial algal species become dominant. Both sea otter predation and commercial sea urchin harvest are ecologically and economically important sources of urchin mortality in nearshore benthic systems in northern Washington marine waters. We recorded changes in density of macroalgae in San Juan Channel, a marine reserve in the physically protected inland waters of northern Washington, resulting from three levels of experimental urchin harvest: (1) simulated sea otter predation (monthly complete harvest of sea urchins), (2) simulated commercial urchin harvest (annual size-selective harvest of sea urchins), and (3) no harvest (control). The two experimental urchin removal treatments did not significantly increase the density of perennial (Agarum and Laminaria) or annual (Desmarestia, Costaria, Alaria and Nereocystis) species of macroalgae after 2 years, despite significant and persistent decreases in urchin densities. Our results suggest that other factors such as grazing by other invertebrates, the presence of dense Agarum stands, and recruitment frequency of macroalgae and macroinvertebrates may play a large role in influencing community structure in San Juan Channel and other physically protected marine waters within the range of sea otters.
Dead diatom assemblages in surface sediments from a low impacted estuary: the Quequén Salado river, ArgentinaHassan, Gabriela; Espinosa, Marcela; Isla, Federico
doi: 10.1007/s10750-006-0407-6pmid: N/A
In the context of a main project that aims to recover modern data on diatom distribution applicable to paleosalinity reconstructions in coastal areas of Southern South America, the composition and distribution of dead diatom assemblages in the littoral zone of the Quequén Salado estuary (Argentina) were studied. Diatom zones were defined along the estuarine gradient by cluster analysis and related to the salinity range and sediment composition by Canonical Correspondence Analysis. Four diatom zones were identified. A mixture of marine, brackish and freshwater diatoms, probably allochthonous, characterized the inlet (zone I). Marine/brackish taxa, represented mainly by Paralia sulcata dominated zone II, characterized by polyhaline conditions and sandy sediments. Zone III was characterized by mesohaline conditions, muddy sediments and the dominance of the estuarine diatom Amphora helenensis. Brackish/freshwater and freshwater diatoms dominated the headwaters (zone IV), where salinity was always below 5‰. The comparison of Quequén Salado diatom assemblages with previous results from the Quequén Grande estuary showed a similar taxonomic composition between both estuaries. However, differences in the salinity ranges of the estuaries (related to differences in the degree of human impact and tidal range) lead to a displacement in their spatial distribution along the longitudinal estuarine axis. This paper contributes to the knowledge of the ecological requirements of South American estuarine diatoms and provides useful data for paleosalinity reconstructions in the region.
Structures of benthic insect communities in two southeastern Wyoming (USA) streams: similarities and differences among spatial units at different local scalesWu, Dayong; Legg, David
doi: 10.1007/s10750-006-0426-3pmid: N/A
Four sites on each of two southeastern Wyoming streams, Medicine Bow River (MBR) and Rock Creek (RC), were investigated during the summer and autumn of 2001 and 2002. This investigation resulted in inventories of benthic insect communities being obtained from these two streams. It also resulted in twelve metrics being calculated from benthic insect communities, and these metrics were compared between two spatial units at different local scales. Of the metrics used, five indicated taxa richness, four indicated relative abundance, two indicated diversity, and one involved a biotic index for organic pollution. More specifically, we used each metric to compare the montane with the plains sub-basin, as well as to compare two distinctly different types of substrates within each of the sub-basins. Also, metrics were compared between the two streams. Results indicated that few differences were observed between naturally-occurring substrates within sub-basins. In addition, few differences were observed between the two streams. In contrast, however, several differences were observed between the montane and plains sub-basins. Such differences were caused from naturally-occurring variations in hydraulic and ecological conditions. These findings suggest that the spatial scale should be carefully considered when selecting metrics for use in monitoring programs that are designed to detect anthropogenic disturbances in lotic systems.
The spectral responses of a submerged plant Vallisneria spiralis with varying biomass using spectroradiometerYuan, Lin; Zhang, Li-Quan
doi: 10.1007/s10750-006-0444-1pmid: N/A
The relationship between land features and their spectral characteristics is a key for the interpretation of remote sensing images. This study was designed to investigate the spectral responses of Vallisneria spiralis, a common submerged aquatic plant in Shanghai, with varying biomass both in the laboratory and in the Middle Lake section of a field-scale constructed wetland, using a FieldSpec™ Pro JR Field Portable Spectroradiometer. The results showed that the reflectance rate of V. spiralis increased with its increasing biomass, and this was exhibited both at the visible band (500–650 nm) and the near infrared band (700–900 nm). The water environment influenced the reflectance rate and the primary differences between the laboratory and field results mainly occurred at the near-infrared band (700–900 nm). A regression analysis was carried out between the biomass of V. spiralis and the reflectance rate at the wavelengths of QuickBird™ bands where the biomass responded most strongly. The results of this analysis showed a clear linear relationship by which the biomass of V. spiralis could be quantitatively deduced from the reflectance rate measured in situ. The implications of this observation, in terms of the ability of hyperspectral remote sensing to estimate and monitor the distribution and dynamics of submerged aquatic vegetation on a large scale, are discussed.
Macroinfauna community structure and biochemical composition of sedimentary organic matter along a gradient of wave exposure in sandy beaches (NW Spain)Rodil, I.; Lastra, M.; López, J.
doi: 10.1007/s10750-006-0443-2pmid: N/A
Six sandy beaches on the North West coast of Spain, exposed to different wave action, were sampled in order to study the macroinfauna community and the biopolymeric fraction (proteins, lipids and carbohydrates) of sedimentary organic matter. According to McLachlan’s rating system (1980), three of them were classified as sheltered and the other three as exposed beaches. Sampling was carried out during August 2004 at three tidal levels: high, medium and low. Macroinfauna community and organic matter concentrations were found to be significantly different when sheltered and exposed beaches were compared. Macroinfauna diversity (H′), abundances and biomass became increasingly enriched along a gradient from exposed to sheltered beaches. Macroinfauna mean abundance was found higher in sheltered (ranked from 1535 ± 358 to 15062 ± 5771 ind m−2) than in exposed beaches (from 150 ± 41 to 5518 ± 1986 ind m−2). Macroinfauna biomass ranged from 3.2 to 14.7 g m−2 and species richness from 25 to 27 in sheltered localities; while in exposed beaches, biomass ranged from 0.2 to 2.3 g m−2 and the number of species from 5 to 14. The biopolymeric carbon concentration (BPC) was significantly higher in sheltered (from 84.7 ± 44.7 to 163.3 ± 34.8) than in exposed (from 30.3 ± 7.5 to 78.7 ± 12.3) beaches. The low hydrodynamic conditions of sheltered beaches favoured the settlement of organic rich fine sediments, being supported by the higher protein to carbohydrate ratio found in the exposed (from 23.5 ± 0.9 to 32.7 ± 4.4), rather than in the sheltered localities (from 6.2 ± 0.7 to 13.6). Mean macroinfauna abundances were higher at medium and low tidal levels in both sheltered and exposed beaches. Crustacea was found to be the main group inhabiting the upper part of both types of beaches, dominating all tidal levels of exposed sandy beaches. Mollusca and Polychaeta groups were dominant in sheltered beaches at the medium and lower levels. There was a significant negative relationship between the BPC and the beach face slope; thus, BPC decreased as the intertidal slope increased. It seems that exposed sandy beaches are mainly physically controlled, whereas hospitable sheltered beaches let other factors, such as biochemical compounds, enrich the benthic fauna scenery.
Genetic and morphologic variation of the Pecos assiminea, an endangered mollusk of the Rio Grande region, United States and Mexico (Caenogastropoda: Rissooidea: Assimineidae)Hershler, Robert; Liu, Hsiu-Ping; Lang, B.
doi: 10.1007/s10750-006-0473-9pmid: N/A
Assiminea pecos is an endangered species of amphibious gastropod that occupies four widely separated portions of the Rio Grande region in the southwestern United States (Pecos River basin) and northeastern Mexico (Cuatro Cienegas basin). Our statistical and discriminant function analyses of shell variation among the disjunct populations of this species indicate that Mexican specimens differ in their morphometry from those of the United States and can be diagnosed by several characters. We also analyzed variation in the mitochondrial genome by sequencing 658 bp of mitochondrial COI from populations of A. pecos, representatives of the other three North American species of Assiminea, and several outgroups. Our results indicated substantial divergence of the Mexican population of A. pecos, which was consistently depicted as a monophyletic unit nested within or sister to the shallowly structured group comprised of American members of this species. Consistent with our findings, we describe the Mexican population as a new species, which is provisionally placed in the large, worldwide genus Assiminea pending further study of the phylogentic relationships of the North American assimineids. Our molecular data suggest that the Rio Grande region assimineids, which are among the few inland members of the otherwise estuarine subfamily Assimineinae, diverged from coastal progenitors in the late Miocene, with subsequent Pleistocene vicariance of Mexican and American species perhaps associated with development of the modern, lower course of the Rio Grande.