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C. Courtin, J. Delcour (2002)
Arabinoxylans and Endoxylanases in Wheat Flour Bread-makingJournal of Cereal Science, 35
A. Boraston, D. Bolam, H. Gilbert, G. Davies (2004)
Carbohydrate-binding modules: fine-tuning polysaccharide recognition.The Biochemical journal, 382 Pt 3
Dylan Dodd, I. Cann (2009)
Enzymatic deconstruction of xylan for biofuel productionGCB Bioenergy, 1
Sven Cuyvers, Jelle Hendrix, Emmie Dornez, Y. Engelborghs, J. Delcour, C. Courtin (2011)
Both substrate hydrolysis and secondary substrate binding determine xylanase mobility as assessed by FRAP.The journal of physical chemistry. B, 115 16
A. Pollet, J. Delcour, C. Courtin (2010)
Structural determinants of the substrate specificities of xylanases from different glycoside hydrolase familiesCritical Reviews in Biotechnology, 30
L. Saulnier, P. Sado, G. Branlard, G. Charmet, F. Guillon (2007)
Wheat arabinoxylans : Exploiting variation in amount and composition to develop enhanced varietiesJournal of Cereal Science, 46
T. Collins, A. Hoyoux, A. Dutron, J. Georis, B. Génot, T. Dauvrin, F. Arnaut, C. Gerday, G. Feller (2006)
Use of glycoside hydrolase family 8 xylanases in bakingJournal of Cereal Science, 43
A. Schmidt, G. Gübitz, C. Kratky (1999)
Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.Biochemistry, 38 8
Sven Cuyvers, Emmie Dornez, J. Delcour, C. Courtin (2012)
Occurrence and functional significance of secondary carbohydrate binding sites in glycoside hydrolasesCritical Reviews in Biotechnology, 32
Martin Ludwiczek, M. Heller, T. Kantner, L. McIntosh (2007)
A secondary xylan-binding site enhances the catalytic activity of a single-domain family 11 glycoside hydrolase.Journal of molecular biology, 373 2
T. Verwimp, V. Craeyveld, C. Courtin, J. Delcour (2007)
Variability in the structure of rye flour alkali-extractable arabinoxylans.Journal of agricultural and food chemistry, 55 5
M. Nielsen, S. Bozonnet, E. Seo, J. Mótyán, J. Andersen, A. Dilokpimol, M. Hachem, G. Gyémánt, H. Naested, L. Kandra, B. Sigurskjold, B. Svensson (2009)
Two secondary carbohydrate binding sites on the surface of barley alpha-amylase 1 have distinct functions and display synergy in hydrolysis of starch granules.Biochemistry, 48 32
C. Ragunath, Suba Manuel, V. Venkataraman, H. Sait, C. Kasinathan, N. Ramasubbu (2008)
Probing the role of aromatic residues at the secondary saccharide-binding sites of human salivary alpha-amylase in substrate hydrolysis and bacterial binding.Journal of molecular biology, 384 5
Priscilla Verjans, Emmie Dornez, Martien Segers, S. Campenhout, K. Bernaerts, T. Beliën, J. Delcour, C. Courtin (2010)
Truncated derivatives of a multidomain thermophilic glycosyl hydrolase family 10 xylanase from Thermotoga maritima reveal structure related activity profiles and substrate hydrolysis patterns.Journal of biotechnology, 145 2
T. Collins, M. Meuwis, I. Stals, M. Claeyssens, G. Feller, C. Gerday (2002)
A Novel Family 8 Xylanase : Functional and Physico-chemical Characterization
F Petegem, T Collins, MA Meuwis, C Gerday, G Feller, J Beeumen (2003)
The structure of a cold-adapted family 8 xylanase at 1.3 Å resolution—structural adaptations to cold and investigation of the active siteJ Biol Chem, 278
J Gašperík, E Hostinová, J Ševčík (2005)
Acarbose binding at the surface of Saccharomycopsis fibuligera glucoamylase suggests the presence of a raw starch-binding siteBiologia, 60
A. Pollet, J. Schoepe, Emmie Dornez, S. Strelkov, J. Delcour, C. Courtin (2010)
Functional analysis of glycoside hydrolase family 8 xylanases shows narrow but distinct substrate specificities and biotechnological potentialApplied Microbiology and Biotechnology, 87
V. Craeyveld, Emmie Dornez, U. Holopainen, Emilia Selinheimo, K. Poutanen, J. Delcour, C. Courtin (2010)
Wheat bran AX properties and choice of xylanase affect enzymic production of wheat bran-derived arabinoxylan-oligosaccharidesCereal Chemistry, 87
S. Mangala, F. Kittur, M. Nishimoto, K. Sakka, K. Ohmiya, M. Kitaoka, K. Hayashi (2003)
Fusion of family VI cellulose binding domains to Bacillus halodurans xylanase increases its catalytic activity and substrate-binding capacity to insoluble xylanJournal of Molecular Catalysis B-enzymatic, 21
E. Vandermarliere, T. Bourgois, Sigrid Rombouts, S. Campenhout, G. Volckaert, S. Strelkov, J. Delcour, A. Rabijns, C. Courtin (2008)
Crystallographic analysis shows substrate binding at the -3 to +1 active-site subsites and at the surface of glycoside hydrolase family 11 endo-1,4-beta-xylanases.The Biochemical journal, 410 1
M. Izydorczyk, C. Biliaderis (1995)
Cereal arabinoxylans: advances in structure and physicochemical propertiesCarbohydrate Polymers, 28
Sven Cuyvers, Emmie Dornez, M. Rezaei, A. Pollet, J. Delcour, C. Courtin (2011)
Secondary substrate binding strongly affects activity and binding affinity of Bacillus subtilis and Aspergillus niger GH11 xylanasesThe FEBS Journal, 278
A. Wallace, R. Laskowski, J. Thornton (1995)
LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions.Protein engineering, 8 2
K. Gebruers, C. Courtin, J. Delcour (2009)
Quantification of arabinoxylans and their degree of branching using gas chromatography.
Mursheda Ali, H. Hayashi, S. Karita, M. Goto, T. Kimura, K. Sakka, K. Ohmiya (2001)
Importance of the Carbohydrate-Binding Module of Clostridium stercorarium Xyn10B to Xylan HydrolysisBioscience, Biotechnology, and Biochemistry, 65
D Dodd, IKO Cann (2009)
Enzymatic deconstruction of xylan for biofuel productionGlob Change Biol Bioenergy, 1
K. Moers, I. Celus, K. Brijs, C. Courtin, J. Delcour (2005)
Endoxylanase substrate selectivity determines degradation of wheat water-extractable and water-unextractable arabinoxylan.Carbohydrate research, 340 7
F. Petegem, T. Collins, M. Meuwis, C. Gerday, G. Feller, J. Beeumen (2003)
The Structure of a Cold-adapted Family 8 Xylanase at 1.3 Å ResolutionThe Journal of Biological Chemistry, 278
A. Sunna, M. Gibbs, P. Bergquist (2000)
A novel thermostable multidomain 1,4-beta-xylanase from 'Caldibacillus cellulovorans' and effect of its xylan-binding domain on enzyme activity.Microbiology, 146 ( Pt 11)
D. Vos, T. Collins, W. Nerinckx, S. Savvides, M. Claeyssens, C. Gerday, G. Feller, J. Beeumen (2006)
Oligosaccharide binding in family 8 glycosidases: crystal structures of active-site mutants of the beta-1,4-xylanase pXyl from Pseudoaltermonas haloplanktis TAH3a in complex with substrate and product.Biochemistry, 45 15
G. Cleemput, M. Oort, M. Hessing, M. Bergmans, H. Gruppen, P. Grobet, J. Delcour (1995)
Variation in the degree of d-xylose substitution in arabinoxylans extracted from a European wheat flourJournal of Cereal Science, 22
Emmie Dornez, K. Gebruers, J. Delcour, C. Courtin (2009)
Grain-associated xylanases: occurrence, variability, and implications for cereal processingTrends in Food Science and Technology, 20
B. Cantarel, P. Coutinho, C. Rancurel, T. Bernard, V. Lombard, B. Henrissat (2008)
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for GlycogenomicsNucleic Acids Research, 37
K Gebruers, CM Courtin, JA Delcour (2009)
Healthgrain Methods—Analysis of Bioactive Components in Small Grain Cereals
Franz John, Javier González, E. Pozharski (2010)
Consolidation of glycosyl hydrolase family 30: A dual domain 4/7 hydrolase family consisting of two structurally distinct groupsFEBS Letters, 584
J. Sun, K. Sakka, S. Karita, Tetsuya Kimura, K. Ohmiya (1998)
Adsorption of Clostridium stercorarium xylanase A to insoluble xylan and the importance of the CBDs to xylan hydrolysisJournal of Fermentation and Bioengineering, 85
P. Bajpai (2004)
Biological Bleaching of Chemical PulpsCritical Reviews in Biotechnology, 24
L. Leggio, S. Kalogiannis, K. Eckert, Susana Teixeira, M. Bhat, C. Andrei, R. Pickersgill, S. Larsen (2001)
Substrate specificity and subsite mobility in T. aurantiacus xylanase 10AFEBS Letters, 509
A. Ebringerová, T. Heinze (2000)
Xylan and xylan derivatives – biopolymers with valuable properties, 1. Naturally occurring xylans structures, isolation procedures and propertiesMacromolecular Rapid Communications, 21
Previously, it has been demonstrated that the glycoside hydrolase family 8 xylanase from the psychrophylic bacterium Pseudoalteromonas haloplanktis (XPH) can bind substrate non-catalytically on the surface of its catalytic module. In the present study, the functional relevance of this secondary binding site (SBS) for the enzyme is investigated by site-directed mutagenesis and evaluation of activity and binding properties of mutant variants on a range of structurally different homoxylan and heteroxylan substrates. The SBS had an impact on the activity on insoluble substrates, whereas the activity on soluble substrates remained unaffected. Unexpectedly, the activity on a soluble oligomeric substrate was also affected for some mutants and results on a chromophoric polymeric model substrate were in contrast with the trends observed on the corresponding natural substrate. All in all, results show that the impact of the SBS on the activity of XPH is in part analogous to the functioning of some carbohydrate-binding modules in modular enzymes.
Applied Microbiology and Biotechnology – Springer Journals
Published: Jun 9, 2011
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