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U. Schliewen, K. Rassmann, M. Markmann, Jeffrey Markert, T. Kocher, D. Tautz (2001)
Genetic and ecological divergence of a monophyletic cichlid species pair under fully sympatric conditions in Lake Ejagham, CameroonMolecular Ecology, 10
G. Evanno, S. Regnaut, J. Goudet (2005)
Detecting the number of clusters of individuals using the software structure: a simulation studyMolecular Ecology, 14
D. Falush, M. Stephens, J. Pritchard (2003)
Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.Genetics, 164 4
S. Alesandrini, G. Bernardi (1999)
Ancient species flocks and recent speciation events: what can rockfish teach us about cichlids (and vice versa)?Journal of molecular evolution, 49 6
V. Buonaccorsi, C. Kimbrell, E. Lynn, R. Vetter (2002)
Population structure of copper rockfish (Sebastes caurinus) reflects postglacial colonization and contemporary patterns of larval dispersalCanadian Journal of Fisheries and Aquatic Sciences, 59
A. Rocha-Olivares, R. Vetter (1999)
Effects of oceanographic circulation on the gene flow, genetic structure, and phylogeography of the rosethorn rockfish (Sebastes helvomaculatus)Canadian Journal of Fisheries and Aquatic Sciences, 56
JC Briggs (1995)
Global Biogeography
M. Cummings (2004)
PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]Dictionary of Bioinformatics and Computational Biology
M. Hickerson, C. Cunningham (2005)
CONTRASTING QUATERNARY HISTORIES IN AN ECOLOGICALLY DIVERGENT SISTER PAIR OF LOW‐DISPERSING INTERTIDAL FISH (XIPHISTER) REVEALED BY MULTILOCUS DNA ANALYSISEvolution, 59
J. Pritchard, Matthew Stephens, P. Donnelly (2000)
Inference of population structure using multilocus genotype data.Genetics, 155 2
Daniel Miller, J. Geibel (1973)
Fish Bulletin 158. Summary of Blue Rockfish and Lingcod Life Histories; A Reef Ecology Study; And Giant Kelp, Macrocystis Pyrifera, Experiments In Monterey Bay, CaliforniaScripps Institution of Oceanography Library
J. Eastman, A. McCune (2000)
Fishes on the Antarctic continental shelf : evolution of a marine species flock?Journal of Fish Biology, 57
B. Weir, C. Cockerham (1984)
ESTIMATING F‐STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTUREEvolution, 38
C Riginos, CW Cunningham (2005)
Local adaptation and species segregation in two mussel (Mytilus edulis × Mytilus trossulus) hybrid zonesMol Ecol, 14
S. Narum, V. Buonaccorsi, C. Kimbrell, R. Vetter (2004)
Genetic Divergence between Gopher Rockfish (Sebastes carnatus) and Black and Yellow Rockfish (Sebastes chrysomelas)Copeia, 2004
J. Goudet (1995)
FSTAT (Version 1.2): A Computer Program to Calculate F-StatisticsJournal of Heredity, 86
M. Sorenson, J. Ast, Derek Dimcheff, Tamaki Yuri, D. Mindell (1999)
Primers for a PCR-based approach to mitochondrial genome sequencing in birds and other vertebrates.Molecular phylogenetics and evolution, 12 2
SV Edwards, P Beerli (2000)
Gene divergence, population divergence, and the variance in coalescence time in phylogeographic studiesEvolution, 54
C. Oosterhout, William Hutchinson, Derek Wills, P. Shipley (2004)
Micro-Checker: Software for identifying and correcting genotyping errors in microsatellite dataMolecular Ecology Notes, 4
L. Seeb (1998)
Gene flow and introgression within and among three species of rockfishes, Sebastes auriculatus, S. caurinus, and S. maligerJournal of Heredity, 89
A. Rocha-Olivares, C. Kimbrell, B. Eitner, R. Vetter (1999)
Evolution of a mitochondrial cytochrome b gene sequence in the species-rich genus sebastes (Teleostei, Scorpaenidae) and its utility in testing the monophyly of the subgenus Sebastomus.Molecular phylogenetics and evolution, 11 3
Woo-jai Lee, J. Conroy, W.Huntting Howell, ThomasD. Kocher (1995)
Structure and evolution of teleost mitochondrial control regionsJournal of Molecular Evolution, 41
Cynthia Riginos, C. Cunningham (2004)
INVITED REVIEW: Local adaptation and species segregation in two mussel (Mytilus edulis × Mytilus trossulus) hybrid zonesMolecular Ecology, 14
S. Edwards, P. Beerli (2000)
PERSPECTIVE: GENE DIVERGENCE, POPULATION DIVERGENCE, AND THE VARIANCE IN COALESCENCE TIME IN PHYLOGEOGRAPHIC STUDIESEvolution, 54
J. Nylander, F. Ronquist, J. Huelsenbeck, J. Nieves‐Aldrey (2004)
Bayesian phylogenetic analysis of combined data.Systematic biology, 53 1
G. Vermeij (1991)
Anatomy of an invasion: the trans-Arctic interchangePaleobiology, 17
Brice Quenouille, E. Bermingham, S. Planes (2004)
Molecular systematics of the damselfishes (Teleostei: Pomacentridae): Bayesian phylogenetic analyses of mitochondrial and nuclear DNA sequences.Molecular phylogenetics and evolution, 31 1
J. Cope (2004)
Population genetics and phylogeography of the blue rockfish (Sebastes mystinus) from Washington to CaliforniaCanadian Journal of Fisheries and Aquatic Sciences, 61
M. Raymond, F. Rousset (1995)
GENEPOP (version 1.2): population genetic software for exact tests and ecumenicism
M. Raymond, F. Rousset (1995)
AN EXACT TEST FOR POPULATION DIFFERENTIATIONEvolution, 49
JA Coyne, HA Orr (2004)
Speciation
M. Westerman, V. Buonaccorsi, J. Stannard, L. Galver, C. Taylor, E. Lynn, C. Kimbrell, R. Vetter (2005)
Cloning and characterization of novel microsatellite DNA markers for the grass rockfish, Sebastes rastrelliger, and cross-species amplification in 10 related Sebastes sppMolecular Ecology Notes, 5
J. Wares, C. Cunningham (2001)
PHYLOGEOGRAPHY AND HISTORICAL ECOLOGY OF THE NORTH ATLANTIC INTERTIDAL, 55
A. Kendall (2000)
An Historical Review of Sebastes Taxonomy and Systematics
M. Kuhner, Jon Yamato, J. Felsenstein (1998)
Maximum likelihood estimation of population growth rates based on the coalescent.Genetics, 149 1
J. Huelsenbeck, F. Ronquist (2001)
MRBAYES: Bayesian inference of phylogenetic treesBioinformatics, 17 8
A. Rocha-Olivares, R. Rosenblatt, R. Vetter (1999)
Molecular evolution, systematics, and zoogeography of the rockfish subgenus Sebastomus (Sebastes, Scorpaenidae) based on mitochondrial cytochrome b and control region sequences.Molecular phylogenetics and evolution, 11 3
Sun-Wei Guo, E. Thompson (1992)
Performing the exact test of Hardy-Weinberg proportion for multiple alleles.Biometrics, 48 2
J. Avise, J. Neigel, J. Arnold (2005)
Demographic influences on mitochondrial DNA lineage survivorship in animal populationsJournal of Molecular Evolution, 20
T Wyllie-Echeverria (1987)
Thirty-four species of California rockfishes: maturity and seasonality of reproductionFish Bull, 85
L Excoffier, G Laval, S Schneider (2005)
Arlequin v.3.0: An integreated software package for population genetics data analysisEvol Bioinf Online, 1
G. Johns, J. Avise (1998)
TESTS FOR ANCIENT SPECIES FLOCKS BASED ON MOLECULAR PHYLOGENETIC APPRAISALS OF SEBASTES ROCKFISHES AND OTHER MARINE FISHESEvolution, 52
M. Love, M. Yoklavich, L. Thorsteinson (2002)
The Rockfishes of the Northeast Pacific
S. Roques, J. Sévigny, L. Bernatchez (2002)
Genetic structure of deep-water redfish, Sebastesmentella, populations across the North AtlanticMarine Biology, 140
V. Buonaccorsi, C. Kimbrell, E. Lynn, R. Vetter (2005)
Limited realized dispersal and introgressive hybridization influence genetic structure and conservation strategies for brown rockfish, Sebastes auriculatusConservation Genetics, 6
D. Posada, K. Crandall (1998)
MODELTEST: testing the model of DNA substitutionBioinformatics, 14 9
E. Sotka, J. Wares, J. Barth, R. Grosberg, S. Palumbi (2004)
Strong genetic clines and geographical variation in gene flow in the rocky intertidal barnacle Balanus glandulaMolecular Ecology, 13
M. Nei, W. Li (1979)
Mathematical model for studying genetic variation in terms of restriction endonucleases.Proceedings of the National Academy of Sciences of the United States of America, 76 10
SJ Jorgensen, DM Kaplan, AP Klimley, SG Morgan, MR OFarrell, LW Botsford (2006)
Limited movement in blue rockfish Sebastes mystinus: internal structure of home rangeMarine Ecology Progress Series, 327
D. Swofford, D. Swofford, D. Swofford (2002)
PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10
M. Barluenga, K. Stölting, W. Salzburger, Moritz Muschick, A. Meyer (2006)
Sympatric speciation in Nicaraguan crater lake cichlid fishNature, 439
N. Knowlton (2000)
Molecular genetic analyses of species boundaries in the seaHydrobiologia, 420
Jessica Miller, M. Banks, D. Gomez-Uchida, A. Shanks (2005)
A comparison of population structure in black rockfish (Sebastes melanops) as determined with otolith microchemistry and microsatellite DNACanadian Journal of Fisheries and Aquatic Sciences, 62
L. Excoffier, P. Smouse, J. Quattro (1992)
Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data.Genetics, 131 2
W. Rice (1989)
ANALYZING TABLES OF STATISTICAL TESTSEvolution, 43
M. McCartney, J. Acevedo, C. Heredia, C. Rico, Brice Quenoville, E. Bermingham, W. McMillan (2003)
Genetic mosaic in a marine species flockMolecular Ecology, 12
RR Sokal, FJ Rohlf (1995)
Biometry
D. Howard, S. Berlocher (1998)
Endless Forms: Species and Speciation
M. Nei (1987)
Molecular Evolutionary Genetics
R. Larson (1980)
Territorial behavior of the black and yellow rockfish and gopher rockfish (Scorpaenidae, Sebastes)Marine Biology, 58
Martha Burford, R. Larson (2007)
Genetic heterogeneity in a single year-class from a panmictic population of adult blue rockfish (Sebastes mystinus)Marine Biology, 151
D. Schluter (2000)
Ecological Character Displacement in Adaptive RadiationThe American Naturalist, 156
N. Knowlton (1993)
Sibling species in the seaAnnual Review of Ecology, Evolution, and Systematics, 24
T. Gill
Critical remarks on the genera Sebastes and Sebastodes of Ayres, 16
DJ Miller, JJ Geibel (1973)
Summary of blue rockfish and lingcod life histories; a reef ecology study; and giant kelp, Macrocystis pyrifera, experiments in Monterey Bay, CaliforniaFish Bull, 158
J. Hyde, R. Vetter (2007)
The origin, evolution, and diversification of rockfishes of the genus Sebastes (Cuvier).Molecular phylogenetics and evolution, 44 2
P. Marko (2004)
‘What's larvae got to do with it?’ Disparate patterns of post‐glacial population structure in two benthic marine gastropods with identical dispersal potentialMolecular Ecology, 13
V. Buonaccorsi, M. Westerman, J. Stannard, C. Kimbrell, E. Lynn, R. Vetter (2003)
Molecular genetic structure suggests limited larval dispersal in grass rockfish, Sebastes rastrelligerMarine Biology, 145
The high frequency of speciation events associated with species flocks (i.e., radiations of closely related species) provides invaluable insight into the speciation process. Investigations of the speciation process in the marine environment are rare, and therefore, the genetic analysis of the rockfish genus Sebastes, considered an ancient marine species flock, provides an opportunity to investigate this process in the sea. Using both mitochondrial and nuclear markers, we analyzed five closely related species within the rockfish subgenus Sebastosomus. Our goal was to understand the evolutionary history and genetic relationships among species within this group and to provide evidence of recent speciation events within the subgenus. In the genetic analysis of the subgenus, we found different stages of the speciation process, with greater genetic divergences among three of the five species, evidence of recent divergence between two of the five species, Sebastes entomelas and S. mystinus, and significant genetic divergence between two lineages within S. mystinus revealing a signature of incipient speciation. We also found frequency differences of the two S. mystinus lineages among sample locations and found no evidence of introgression between the lineages at the location where both coexist. Although Sebastes is an example of an ancient species flock, this study provides evidence of ongoing speciation within the genus and reveals stages of this process from incipient to distinct species.
Marine Biology – Springer Journals
Published: Apr 2, 2008
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