-
S.
Johansen,
P.
Haugen
(2001)
A new nomenclature of group I introns in ribosomal DNA.
RNA, 7 7
-
M.
Yusupov,
G.
Yusupova,
A.
Baucom,
K.
Lieberman,
T.
Earnest,
J.
Cate,
H.
Noller
(2001)
Crystal Structure of the Ribosome at 5.5 Å Resolution
Science, 292
-
K.
Lonergan,
M.
Gray
(1994)
The ribosomal RNA gene region in Acanthamoeba castellanii mitochondrial DNA. A case of evolutionary transfer of introns between mitochondria and plastids?
Journal of molecular biology, 239 4
-
T.
Hall
(1999)
BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT
-
C.
Nesbø,
W.
Doolittle
(2003)
Active self-splicing group I introns in 23S rRNA genes of hyperthermophilic bacteria, derived from introns in eukaryotic organelles
Proceedings of the National Academy of Sciences of the United States of America, 100
-
F.
Michel,
E.
Westhof
(1990)
Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis.
Journal of molecular biology, 216 3
-
Yi
Zhang,
Achim
Bell,
P.
Perlman,
Michael
Leibowitz,
Michael
Leibowitz
(2000)
Pentamidine inhibits mitochondrial intron splicing and translation in Saccharomyces cerevisiae.
RNA, 6 7
-
F.
Paz,
C.
Paz
(1994)
[Q fever].
Medicina clinica, 103 17
-
F.
Michel,
M.
Hanna,
R.
Green,
D.
Bartel,
J.
Szostak
(1989)
The guanosine binding site of the Tetrahymena ribozyme
Nature, 342
-
John
Burke
(1989)
Selection of the 3′‐splice site in group I introns
FEBS Letters, 250
-
J.
Roman,
S.
Woodson
(1998)
Integration of the Tetrahymena group I intron into bacterial rRNA by reverse splicing in vivo.
Proceedings of the National Academy of Sciences of the United States of America, 95 5
-
W.
Hughes
(1991)
Prevention and treatment of Pneumocystis carinii pneumonia.
Annual review of medicine, 42
-
D.
Posada,
K.
Crandall
(1998)
MODELTEST: testing the model of DNA substitution
Bioinformatics, 14 9
-
S.
Suh,
K.
Jones,
M.
Blackwell
(1999)
A Group I Intron in the Nuclear Small Subunit rRNA Gene of Cryptendoxyla hypophloia, an Ascomycetous Fungus: Evidence for a New Major Class of Group I Introns
Journal of Molecular Evolution, 48
-
A.
Lambowitz,
M.
Caprara,
S.
Zimmerly,
P.
Perlman
(1999)
18 Group I and Group II Ribozymes as RNPs: Clues to the Past and Guides to the Future
Cold Spring Harbor Monograph Archive, 37
-
Q.
Vicens,
T.
Cech
(2006)
Atomic level architecture of group I introns revealed.
Trends in biochemical sciences, 31 1
-
S.
Woodson
(2005)
Structure and assembly of group I introns.
Current opinion in structural biology, 15 3
-
L.
Hendrix,
J.
Samuel,
L.
Mallavia
(1991)
Differentiation of Coxiella burnetii isolates by analysis of restriction-endonuclease-digested DNA separated by SDS-PAGE.
Journal of general microbiology, 137 2
-
J.
Thompson,
D.
Higgins,
T.
Gibson
(1994)
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
Nucleic acids research, 22 22
-
J.
Williams,
M.
Peacock,
T.
McCaul
(1981)
Immunological and biological characterization of Coxiella burnetii, phases I and II, separated from host components
Infection and Immunity, 32
-
Rekha
Seshadri,
I.
Paulsen,
J.
Eisen,
T.
Read,
K.
Nelson,
W.
Nelson,
N.
Ward,
H.
Tettelin,
Tanja
Davidsen,
M.
Beanan,
R.
Deboy,
Sean
Daugherty,
L.
Brinkac,
R.
Madupu,
R.
Dodson,
H.
Khouri,
Kathy
Lee,
H.
Carty,
D.
Scanlan,
R.
Heinzen,
H.
Thompson,
J.
Samuel,
C.
Fraser,
J.
Heidelberg
(2003)
Complete genome sequence of the Q-fever pathogen Coxiella burnetii
Proceedings of the National Academy of Sciences of the United States of America, 100
-
Hidetoshi
Shimodaira,
M.
Hasegawa
(1999)
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
Molecular Biology and Evolution, 16
-
T.
Tatusova,
Thomas
Madden
(1999)
BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences.
FEMS microbiology letters, 174 2
-
S.
Altschul,
Thomas
Madden,
A.
Schäffer,
Jinghui
Zhang,
Zheng
Zhang,
W.
Miller,
D.
Lipman
(1997)
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Nucleic acids research, 25 17
-
D.
Swofford,
D.
Swofford,
D.
Swofford
(2002)
PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10
-
P.
Beare,
J.
Samuel,
D.
Howe,
K.
Virtaneva,
S.
Porcella,
R.
Heinzen
(2006)
Genetic Diversity of the Q Fever Agent, Coxiella burnetii, Assessed by Microarray-Based Whole-Genome Comparisons
Journal of Bacteriology, 188
-
M.
Goddard,
A.
Burt
(1999)
Recurrent invasion and extinction of a selfish gene.
Proceedings of the National Academy of Sciences of the United States of America, 96 24
-
M.
Stahley,
S.
Strobel
(2006)
RNA splicing: group I intron crystal structures reveal the basis of splice site selection and metal ion catalysis.
Current opinion in structural biology, 16 3
-
P.
Gonzalez,
Gérard
Barroso,
J.
Labarère
(1999)
Molecular gene organisation and secondary structure of the mitochondrial large subunit ribosomal RNA from the cultivated Basidiomycota Agrocybe aegerita: a 13 kb gene possessing six unusual nucleotide extensions and eight introns.
Nucleic acids research, 27 7
-
P.
Haugen,
V.
Huss,
H.
Nielsen,
S.
Johansen
(1999)
Complex group-I introns in nuclear SSU rDNA of red and green algae: evidence of homing-endonuclease pseudogenes in the Bangiophyceae
Current Genetics, 36
-
Kirsten
Müller,
J.
Cannone,
R.
Gutell,
R.
Sheath
(2001)
A structural and phylogenetic analysis of the group IC1 introns in the order Bangiales (Rhodophyta).
Molecular biology and evolution, 18 9
-
P.
Haugen,
D.
Bhattacharya
(2004)
The spread of LAGLIDADG homing endonuclease genes in rDNA.
Nucleic acids research, 32 6
-
T.
Nikolcheva,
S.
Woodson
(1997)
Association of a group I intron with its splice junction in 50S ribosomes: implications for intron toxicity.
RNA, 3 9
-
K.
Everett,
S.
Kahane,
R.
Bush,
M.
Friedman
(1999)
An Unspliced Group I Intron in 23S rRNA LinksChlamydiales, Chloroplasts, and Mitochondria
Journal of Bacteriology, 181
-
G.
Afseth,
Y.
Mo,
L.
Mallavia
(1995)
Characterization of the 23S and 5S rRNA genes of Coxiella burnetii and identification of an intervening sequence within the 23S rRNA gene
Journal of Bacteriology, 177
-
S
Mitchell,
M.
Minnick
(1997)
A carboxy-terminal processing protease gene is located immediately upstream of the invasion-associated locus from Bartonella bacilliformis.
Microbiology, 143 ( Pt 4)
-
P.
Haugen,
D.
Simon,
D.
Bhattacharya
(2005)
The natural history of group I introns.
Trends in genetics : TIG, 21 2
-
B.
Chevalier,
B.
Stoddard
(2001)
Homing endonucleases: structural and functional insight into the catalysts of intron/intein mobility.
Nucleic acids research, 29 18
-
Y.
Ikawa,
Hideaki
Shiraishi,
Tan
Inoue
(2000)
Minimal catalytic domain of a group I self-splicing intron RNA
Nature Structural Biology, 7
-
J.
Price,
T.
Cech
(1988)
Determinants of the 3' splice site for self-splicing of the Tetrahymena pre-rRNA.
Genes & development, 2 11
-
E.
Evguenieva-Hackenberg
(2005)
Bacterial ribosomal RNA in pieces
Molecular Microbiology, 57
-
(2007)
TWO GROUP I INTRONS IN C. BURNETII 23S rRNA GENE 6579