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Journals Journal of Virology Volume 86 Issue 4

Metagenomic Analysis of the Viral Flora of Pine Marten and European Badger Feces Judith M. A. van den Brand a , Marije van Leeuwen b , Claudia M. Schapendonk a , James H. Simon b , Bart L. Haagmans a , Albert D. M. E. Osterhaus a , b and Saskia L. Smits a , b a Department of Virology, Erasmus Medical Center, Rotterdam, The Netherlands b ViroClinics BioSciences BV, Erasmus Medical Center, Rotterdam, The Netherlands ABSTRACT A thorough understanding of the diversity of viruses in wildlife provides epidemiological baseline information about potential pathogens. Metagenomic analysis of the enteric viral flora revealed a new anellovirus and bocavirus species in pine martens and a new circovirus-like virus and geminivirus-related DNA virus in European badgers. In addition, sequences with homology to viruses from the families Paramyxo - and Picornaviridae were detected.

Metagenomic Analysis of the Viral Flora of Pine Marten and European Badger Feces

Abstract

Metagenomic Analysis of the Viral Flora of Pine Marten and European Badger Feces Judith M. A. van den Brand a , Marije van Leeuwen b , Claudia M. Schapendonk a , James H. Simon b , Bart L. Haagmans a , Albert D. M. E. Osterhaus a , b and Saskia L. Smits a , b a Department of Virology, Erasmus Medical Center, Rotterdam, The Netherlands b ViroClinics BioSciences BV, Erasmus Medical Center, Rotterdam, The Netherlands ABSTRACT A thorough understanding of the diversity of viruses in wildlife provides epidemiological baseline information about potential pathogens. Metagenomic analysis of the enteric viral flora revealed a new anellovirus and bocavirus species in pine martens and a new circovirus-like virus and geminivirus-related DNA virus in European badgers. In addition, sequences with homology to viruses from the families Paramyxo - and Picornaviridae were detected.

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Metagenomic Analysis of the Viral Flora of Pine Marten and European Badger Feces

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  • Publisher American Society for Microbiology
  • Copyright Copyright © 2012 by the American society for Microbiology.
  • ISSN 0022-538X
  • eISSN 1098-5514
  • D.O.I. 10.1128/JVI.06373-11
  • Publisher site Get PDF  

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